| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77461718
Identifier: 77461718
GI number: 77461718
Start: 6164288
End: 6164461
Strand: Direct
Name: 77461718
Synonym: Pfl01_5497
Alternate gene names: NA
Gene position: 6164288-6164461 (Clockwise)
Preceding gene: 77461714
Following gene: 77461719
Centisome position: 95.74
GC content: 57.47
Gene sequence:
>174_bases ATGAAGCGCCTGATCTCTTCCCTTGCTGCGCTCGTCGCGGTTGCCTGCCTTGTTTCGGCTTGTGGTCAAAAAGGCCCGCT GTACCTGCCCGATGAAGATCAGGACCCGGCCGAGCAAGCCCAGTCTTCGCAAAAGCAGCCTGTCTCCAAGGCACACAAGC ACGACGTTTACTAA
Upstream 100 bases:
>100_bases CGCAGCCCGAGCCCCGCCGGACGGGAGTTCCGTCGCATAGGCAAGCTGCCGGGTGGCCGGTATACTCCGGCGCAATTAAC GCATTTTCAAGGATTTCGCC
Downstream 100 bases:
>100_bases GGGATCGCCATGGACGCTTTTAACTACCGTGGCGGGGAACTGTTCGCGGAAGGTGTGGCGCTGTCCGCCATCGCCGATCG CTTCGGCACTCCCACCTACG
Product: lipoprotein LppL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 57; Mature: 57
Protein sequence:
>57_residues MKRLISSLAALVAVACLVSACGQKGPLYLPDEDQDPAEQAQSSQKQPVSKAHKHDVY
Sequences:
>Translated_57_residues MKRLISSLAALVAVACLVSACGQKGPLYLPDEDQDPAEQAQSSQKQPVSKAHKHDVY >Mature_57_residues MKRLISSLAALVAVACLVSACGQKGPLYLPDEDQDPAEQAQSSQKQPVSKAHKHDVY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6122; Mature: 6122
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLISSLAALVAVACLVSACGQKGPLYLPDEDQDPAEQAQSSQKQPVSKAHKHDVY CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCC >Mature Secondary Structure MKRLISSLAALVAVACLVSACGQKGPLYLPDEDQDPAEQAQSSQKQPVSKAHKHDVY CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA