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The map label for this gene is ssuC [H]

Identifier: 77461633

GI number: 77461633

Start: 6076302

End: 6077084

Strand: Reverse

Name: ssuC [H]

Synonym: Pfl01_5412

Alternate gene names: 77461633

Gene position: 6077084-6076302 (Counterclockwise)

Preceding gene: 77461634

Following gene: 77461632

Centisome position: 94.39

GC content: 63.6

Gene sequence:

>783_bases
ATGAAGAAATTTATCCACAGCCTCGCGCCCTGGGCGTTGCCGGTGCTGTTGCTGGCGGTGTGGCAGTTGTCGGTGTCGGC
CGGTTGGCTGTCGACGCGGATTCTGCCGGCGCCGGTGGCGGTGATCGAAGCCGGCGTGAGCCTGGTACGCAGCGGCGAAA
TCTGGACGCACCTGGCAATCAGCGGCTGGCGCGCCGCGCTGGGCTTCACCATCGGTGGCAGCATCGGCCTGGTGCTGGGC
TTCATCACCGGCCTGTCGAAGTGGGGCGAACGCCTGCTCGACAGCTCGGTGCAGATGATCCGCAACGTGCCGCACCTGGC
GCTGATTCCGCTGGTGATCCTGTGGTTCGGCATCGACGAGTCGGCGAAGATTTTTCTGGTGGCATTGGGCACATTGTTCC
CGATCTACCTCAACACCTATCACGGCATCCGCAACGTCGATCCGGCGCTGGTGGAAATGGCCCGCAGTTATGGCCTGTCC
GGTTTCAGCCTGTTCTGGCAGGTGATTCTGCCGGGTGCGCTGCCCTCGATTCTGGTCGGCGTGCGCTTCGCCCTGGGCTT
CATGTGGCTGACGCTGATCGTCGCGGAAACCATTTCTGCCAGCTCCGGCATCGGTTATCTGGCGATGAACGCCCGCGAGT
TCTTGCAGACCGACGTGGTGGTGCTGGCGATTCTGCTGTACGCGGTGCTCGGCAAACTGGCCGACCTCGCGGCCCGTGGC
CTTGAACGTGTGTGGCTGCGCTGGCATCCGGCGTATCAAGTGGCGAAAGGAGGTGCGGCATGA

Upstream 100 bases:

>100_bases
TCCGGAATTGCCAAAAAGCGCCGGTTACGTCAGCCCGTTCGGCGAGATGGTGGCCAACGACATTCTTCCCAAAGCCGCGT
CCCAGAGCTGAGGCGCCGCC

Downstream 100 bases:

>100_bases
CCGCTCAACAACCTCCACGCCTGCTGCGCGGGATTCCGCTGGCGGTGCGCAATCTGCAAAAGACCTTCGGCTCGCGGCAA
GTGCTGCGCGGTATCGACTT

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MKKFIHSLAPWALPVLLLAVWQLSVSAGWLSTRILPAPVAVIEAGVSLVRSGEIWTHLAISGWRAALGFTIGGSIGLVLG
FITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLS
GFSLFWQVILPGALPSILVGVRFALGFMWLTLIVAETISASSGIGYLAMNAREFLQTDVVVLAILLYAVLGKLADLAARG
LERVWLRWHPAYQVAKGGAA

Sequences:

>Translated_260_residues
MKKFIHSLAPWALPVLLLAVWQLSVSAGWLSTRILPAPVAVIEAGVSLVRSGEIWTHLAISGWRAALGFTIGGSIGLVLG
FITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLS
GFSLFWQVILPGALPSILVGVRFALGFMWLTLIVAETISASSGIGYLAMNAREFLQTDVVVLAILLYAVLGKLADLAARG
LERVWLRWHPAYQVAKGGAA
>Mature_260_residues
MKKFIHSLAPWALPVLLLAVWQLSVSAGWLSTRILPAPVAVIEAGVSLVRSGEIWTHLAISGWRAALGFTIGGSIGLVLG
FITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLS
GFSLFWQVILPGALPSILVGVRFALGFMWLTLIVAETISASSGIGYLAMNAREFLQTDVVVLAILLYAVLGKLADLAARG
LERVWLRWHPAYQVAKGGAA

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=257, Percent_Identity=75.4863813229572, Blast_Score=358, Evalue=1e-100,
Organism=Escherichia coli, GI1786564, Length=243, Percent_Identity=37.4485596707819, Blast_Score=143, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28168; Mature: 28168

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFIHSLAPWALPVLLLAVWQLSVSAGWLSTRILPAPVAVIEAGVSLVRSGEIWTHLAI
CHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHH
SGWRAALGFTIGGSIGLVLGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGIDE
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
SAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFSLFWQVILPGALPSILVG
CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHH
VRFALGFMWLTLIVAETISASSGIGYLAMNAREFLQTDVVVLAILLYAVLGKLADLAARG
HHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LERVWLRWHPAYQVAKGGAA
HHHHHHHCCCHHHHHCCCCC
>Mature Secondary Structure
MKKFIHSLAPWALPVLLLAVWQLSVSAGWLSTRILPAPVAVIEAGVSLVRSGEIWTHLAI
CHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHH
SGWRAALGFTIGGSIGLVLGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGIDE
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
SAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFSLFWQVILPGALPSILVG
CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHH
VRFALGFMWLTLIVAETISASSGIGYLAMNAREFLQTDVVVLAILLYAVLGKLADLAARG
HHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LERVWLRWHPAYQVAKGGAA
HHHHHHHCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]