Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77461614

Identifier: 77461614

GI number: 77461614

Start: 6054783

End: 6055733

Strand: Reverse

Name: 77461614

Synonym: Pfl01_5393

Alternate gene names: NA

Gene position: 6055733-6054783 (Counterclockwise)

Preceding gene: 77461616

Following gene: 77461612

Centisome position: 94.06

GC content: 61.09

Gene sequence:

>951_bases
ATGTCTGTTGCTTTCGATCCCGATCATCTGCGTGCGAGCCTCAAGCCTTTGGCCGAGTGGCAGCCGTTGTCCGAGGAGGC
GAAGGCGTATCAGCGGTTCTACAAGACCGACTTTCCGGAGCGCGATGTCTGGCGCGGCATGGGCCGGTTCGACATCGATG
GCTATCAACTGGTCAGTCATTGCTGGTGGCCTGCGGAAACGGCCAAGGCCACTCTGTTTCTGGTGCACGGTTTTTATGAC
CACACCGGCCTGTACCGGCATGTGATCGAGTGGGCGCTGGATCAGGGGTTTGCGGTGATTGCCTGCGATCTGCCGGGGCA
TGGATTGTCCAGCGGCGAGCGGGCAAGCATCCGCGATTTCTCCGAGTATCAGGATGCGCTGCAAGGCCTGTTCGCCGAGG
CGCGTTCGATTGCACTGCCGCAGCCGTGGCATTTGTGCGGGCAAAGCACCGGCGGGGCGATCATTGTCGATCACGTGCTC
AATCATGGCGAAAACAGCCCGGCGCAGGGGCAGTTGATTCTGCTGGCGCCGTTGGTGCGTCCGCGTGCCTGGGGCTGGTC
GCAGTTCAGTTATTACCTGCTCAGGCCCTTTGTCAGGGGCATCGCCCGGCGTTTCAGCGAGAACTCCAACGACCCGGATT
TCCTGCCGTTCCTGCAGGCTGATCCGTTGCAGCCAAAACGCTTGCCGACCGCGTGGGTCGGGGCGTTGTCACGCTGGATC
AACCGGGTGGAATACGCGAAGAAAAGTCCGCGCCGGCCACTGATCGTTCAGGGCCAGGCGGACATGACCGTGGACTGGCA
GCACAACCTGCAAGTGTTGAAGTGGAAGTTCGACCGGCCACAGATTCTGTTGCTGGCCGAGGCGCGGCATCACCTGGCCA
ATGAAACGGCGGAAATGCGCGAGGAGTATTTCGAGTTCTTGAGCAAGCGGATCAAGGGCCGCAACCCCTAG

Upstream 100 bases:

>100_bases
CATGGTTTTGATTCCTTGGGAGCGCGCTAGCTTGCCATGCTTGCCGCGACAGATGAATATCGCAGGCCGATAAAGTCCGT
TTACCGTTCTGGAATTGCCC

Downstream 100 bases:

>100_bases
ATCACTGGCTGAGGTTCGAGGTGCTCTGGCCCACGGCGAGCCCGGCGCGGATCGCTGCCAGCGCGGCCTGATAGTAGGCC
TTGCCTTCGGTGGATTCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Lipase; Alpha/Beta Hydrolase Fold; Acylglycerol Lipase; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Hydrolase; Alpha/Beta Hydrolase Fold-Domain Containing Protein; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase Family Protein; Hydrolase Alpha/Beta Fold Family; Lysophospholipase-Like Protein

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MSVAFDPDHLRASLKPLAEWQPLSEEAKAYQRFYKTDFPERDVWRGMGRFDIDGYQLVSHCWWPAETAKATLFLVHGFYD
HTGLYRHVIEWALDQGFAVIACDLPGHGLSSGERASIRDFSEYQDALQGLFAEARSIALPQPWHLCGQSTGGAIIVDHVL
NHGENSPAQGQLILLAPLVRPRAWGWSQFSYYLLRPFVRGIARRFSENSNDPDFLPFLQADPLQPKRLPTAWVGALSRWI
NRVEYAKKSPRRPLIVQGQADMTVDWQHNLQVLKWKFDRPQILLLAEARHHLANETAEMREEYFEFLSKRIKGRNP

Sequences:

>Translated_316_residues
MSVAFDPDHLRASLKPLAEWQPLSEEAKAYQRFYKTDFPERDVWRGMGRFDIDGYQLVSHCWWPAETAKATLFLVHGFYD
HTGLYRHVIEWALDQGFAVIACDLPGHGLSSGERASIRDFSEYQDALQGLFAEARSIALPQPWHLCGQSTGGAIIVDHVL
NHGENSPAQGQLILLAPLVRPRAWGWSQFSYYLLRPFVRGIARRFSENSNDPDFLPFLQADPLQPKRLPTAWVGALSRWI
NRVEYAKKSPRRPLIVQGQADMTVDWQHNLQVLKWKFDRPQILLLAEARHHLANETAEMREEYFEFLSKRIKGRNP
>Mature_315_residues
SVAFDPDHLRASLKPLAEWQPLSEEAKAYQRFYKTDFPERDVWRGMGRFDIDGYQLVSHCWWPAETAKATLFLVHGFYDH
TGLYRHVIEWALDQGFAVIACDLPGHGLSSGERASIRDFSEYQDALQGLFAEARSIALPQPWHLCGQSTGGAIIVDHVLN
HGENSPAQGQLILLAPLVRPRAWGWSQFSYYLLRPFVRGIARRFSENSNDPDFLPFLQADPLQPKRLPTAWVGALSRWIN
RVEYAKKSPRRPLIVQGQADMTVDWQHNLQVLKWKFDRPQILLLAEARHHLANETAEMREEYFEFLSKRIKGRNP

Specific function: Unknown

COG id: COG2267

COG function: function code I; Lysophospholipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI51242953, Length=264, Percent_Identity=26.8939393939394, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI6005786, Length=264, Percent_Identity=26.8939393939394, Blast_Score=69, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36404; Mature: 36273

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVAFDPDHLRASLKPLAEWQPLSEEAKAYQRFYKTDFPERDVWRGMGRFDIDGYQLVSH
CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHH
CWWPAETAKATLFLVHGFYDHTGLYRHVIEWALDQGFAVIACDLPGHGLSSGERASIRDF
CCCCCHHCCEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHH
SEYQDALQGLFAEARSIALPQPWHLCGQSTGGAIIVDHVLNHGENSPAQGQLILLAPLVR
HHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEHHHHHCCCCCCCCCEEEEEECCCC
PRAWGWSQFSYYLLRPFVRGIARRFSENSNDPDFLPFLQADPLQPKRLPTAWVGALSRWI
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
NRVEYAKKSPRRPLIVQGQADMTVDWQHNLQVLKWKFDRPQILLLAEARHHLANETAEMR
HHHHHHHCCCCCCEEEECCCCEEEECCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHH
EEYFEFLSKRIKGRNP
HHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SVAFDPDHLRASLKPLAEWQPLSEEAKAYQRFYKTDFPERDVWRGMGRFDIDGYQLVSH
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHH
CWWPAETAKATLFLVHGFYDHTGLYRHVIEWALDQGFAVIACDLPGHGLSSGERASIRDF
CCCCCHHCCEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHH
SEYQDALQGLFAEARSIALPQPWHLCGQSTGGAIIVDHVLNHGENSPAQGQLILLAPLVR
HHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEHHHHHCCCCCCCCCEEEEEECCCC
PRAWGWSQFSYYLLRPFVRGIARRFSENSNDPDFLPFLQADPLQPKRLPTAWVGALSRWI
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
NRVEYAKKSPRRPLIVQGQADMTVDWQHNLQVLKWKFDRPQILLLAEARHHLANETAEMR
HHHHHHHCCCCCCEEEECCCCEEEECCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHH
EEYFEFLSKRIKGRNP
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA