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The map label for this gene is ydjN [H]

Identifier: 77461581

GI number: 77461581

Start: 6020789

End: 6022180

Strand: Direct

Name: ydjN [H]

Synonym: Pfl01_5360

Alternate gene names: 77461581

Gene position: 6020789-6022180 (Clockwise)

Preceding gene: 77461579

Following gene: 77461583

Centisome position: 93.51

GC content: 62.64

Gene sequence:

>1392_bases
ATGAATCTGCCCCTGATTCTCAACTTGCTGGTGTTCCTCGCCCTGCTCTTCGGTCTGGCGCAAACCCGTCACACCTCGTG
GAGCCTGGCGAAAAAAGTCCTGCTCGCGCTGGTGCTGGGCGTGGCATTCGGCATCGCGTTGCACACGATCTACGGTGCCG
GCAACCCGGTGTTGAAAGCCTCGATCGGCTGGTTCGATCTGGTCGGCAATGGTTACGTGCAACTGCTGCAAATGATCGTG
ATCCCGCTGGTGTTCGCCTCGATCCTCAGCGCCGTGGCCCGTCTGCACAACGCTTCGTCGCTGGGCAAGATCAGCTTCCT
GACCATCGGCACGCTGCTGTTCACCACCGCGATTGCCGCGCTGATCGGCATCGGCCTGACCAACCTGTTCGGCCTGACCG
CCGAAGGTCTGGTTGCCGGCACGCAGGAAATGGCCCGTCTGCAAACCATTCAGACCGACTACGCGGGCAAGGTCGCCGAC
CTGAATGTGCCGCAACTGCTGCTGTCGTTCATCCCGCAGAACCCGTTCGCCGACCTGGCCCGGGCCAAGCCGACCTCGAT
CATCAGCGTGGTGATTTTCGCTGCGTTCCTGGGGGTTGCCGCGCTGCAACTGCTCAAGGATGACGTCGAGAAAGGTCAGA
AAGTGATCAACGCCATCGACACCCTGCAAGCCTGGGTGATGCGTCTGGTGCGTCTTGTGATGAAGCTGACCCCGTACGGC
GTGCTGGCGCTGATGACCAAAGTGGTGGCCGGTTCCAACCTGCAGGACATCATCAAGCTCGGCAGTTTCGTAGTGGTGTC
GTACCTCGGCCTGGGCCTAATGTTTGTGGTGCACGGCTTGCTGGTGTCGGCGGCCGGGATCAACCCGCTGCGTTTCTTCC
GCAAGATCTGGCCGGTGCTGACATTTGCGTTCACCAGCCGCTCCAGCGCCGCGAGCATCCCGCTGAGTATCGAAGCGCAG
ACCCGTCGTCTGGGCATTCCGCAATCGGTGGCAAGCTTCGCTGCTTCGTTCGGCGCGACCATCGGCCAGAACGGCTGCGC
CGGTCTGTACCCGGCGATGTTGGCGGTGATGGTTGCGCCAACCGTCGGCATCAACCCGCTGGATCCGCTGTGGATCGCGA
CGCTGGTGGCGATCGTGACCCTGAGTTCGGCCGGTGTGGCGGGCGTGGGTGGCGGTGCGACCTTCGCCGCGCTGATCGTG
CTGCCGGCCATGGGCTTGCCGGTTTCGCTGGTGGCGTTGCTGATTTCGGTAGAGCCGCTGATCGACATGGGTCGCACGGC
GCTGAACGTGAGCGGTTCGATCACCGCTGGCGCGATTACCAGCCAGGTGATGCAGCAGACCGACAAGGCACTGCTGGATG
CCGATGAGCATGCGGAGCTTGCTCAGGCTTGA

Upstream 100 bases:

>100_bases
CCTTCGATTTCGGTATTAAATCATTGGAAATCAAACTGTTAGGCTTGCCGGTTCGCAACAGCCCCGGAAGGTTGTTGGCA
CAGTCTTTTCTGGAGTTCTC

Downstream 100 bases:

>100_bases
TTGACGTTGTGGCGAGGGAGCGTGCTCCCTCGCCCCAGGTTCAGGCTTTTTCCCAGACTTCGAAATTGTAAGCCGGTTTG
TCGCCTTCAGCCGGATTCGG

Product: Sodium:dicarboxylate symporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MNLPLILNLLVFLALLFGLAQTRHTSWSLAKKVLLALVLGVAFGIALHTIYGAGNPVLKASIGWFDLVGNGYVQLLQMIV
IPLVFASILSAVARLHNASSLGKISFLTIGTLLFTTAIAALIGIGLTNLFGLTAEGLVAGTQEMARLQTIQTDYAGKVAD
LNVPQLLLSFIPQNPFADLARAKPTSIISVVIFAAFLGVAALQLLKDDVEKGQKVINAIDTLQAWVMRLVRLVMKLTPYG
VLALMTKVVAGSNLQDIIKLGSFVVVSYLGLGLMFVVHGLLVSAAGINPLRFFRKIWPVLTFAFTSRSSAASIPLSIEAQ
TRRLGIPQSVASFAASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPLWIATLVAIVTLSSAGVAGVGGGATFAALIV
LPAMGLPVSLVALLISVEPLIDMGRTALNVSGSITAGAITSQVMQQTDKALLDADEHAELAQA

Sequences:

>Translated_463_residues
MNLPLILNLLVFLALLFGLAQTRHTSWSLAKKVLLALVLGVAFGIALHTIYGAGNPVLKASIGWFDLVGNGYVQLLQMIV
IPLVFASILSAVARLHNASSLGKISFLTIGTLLFTTAIAALIGIGLTNLFGLTAEGLVAGTQEMARLQTIQTDYAGKVAD
LNVPQLLLSFIPQNPFADLARAKPTSIISVVIFAAFLGVAALQLLKDDVEKGQKVINAIDTLQAWVMRLVRLVMKLTPYG
VLALMTKVVAGSNLQDIIKLGSFVVVSYLGLGLMFVVHGLLVSAAGINPLRFFRKIWPVLTFAFTSRSSAASIPLSIEAQ
TRRLGIPQSVASFAASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPLWIATLVAIVTLSSAGVAGVGGGATFAALIV
LPAMGLPVSLVALLISVEPLIDMGRTALNVSGSITAGAITSQVMQQTDKALLDADEHAELAQA
>Mature_463_residues
MNLPLILNLLVFLALLFGLAQTRHTSWSLAKKVLLALVLGVAFGIALHTIYGAGNPVLKASIGWFDLVGNGYVQLLQMIV
IPLVFASILSAVARLHNASSLGKISFLTIGTLLFTTAIAALIGIGLTNLFGLTAEGLVAGTQEMARLQTIQTDYAGKVAD
LNVPQLLLSFIPQNPFADLARAKPTSIISVVIFAAFLGVAALQLLKDDVEKGQKVINAIDTLQAWVMRLVRLVMKLTPYG
VLALMTKVVAGSNLQDIIKLGSFVVVSYLGLGLMFVVHGLLVSAAGINPLRFFRKIWPVLTFAFTSRSSAASIPLSIEAQ
TRRLGIPQSVASFAASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPLWIATLVAIVTLSSAGVAGVGGGATFAALIV
LPAMGLPVSLVALLISVEPLIDMGRTALNVSGSITAGAITSQVMQQTDKALLDADEHAELAQA

Specific function: Unknown

COG id: COG1823

COG function: function code R; Predicted Na+/dicarboxylate symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]

Homologues:

Organism=Homo sapiens, GI194239697, Length=472, Percent_Identity=25.2118644067797, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI21314632, Length=434, Percent_Identity=26.2672811059908, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI223468564, Length=275, Percent_Identity=29.4545454545455, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI223468566, Length=275, Percent_Identity=29.4545454545455, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI5032093, Length=275, Percent_Identity=29.0909090909091, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI4827012, Length=493, Percent_Identity=25.1521298174442, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI66773030, Length=265, Percent_Identity=30.5660377358491, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI40254478, Length=236, Percent_Identity=30.5084745762712, Blast_Score=86, Evalue=7e-17,
Organism=Homo sapiens, GI169790839, Length=252, Percent_Identity=29.3650793650794, Blast_Score=80, Evalue=5e-15,
Organism=Escherichia coli, GI1788024, Length=462, Percent_Identity=80.0865800865801, Blast_Score=708, Evalue=0.0,
Organism=Escherichia coli, GI1790514, Length=444, Percent_Identity=25.2252252252252, Blast_Score=122, Evalue=4e-29,
Organism=Escherichia coli, GI1789947, Length=432, Percent_Identity=23.6111111111111, Blast_Score=110, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI71983106, Length=482, Percent_Identity=27.3858921161826, Blast_Score=115, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI71983099, Length=482, Percent_Identity=27.5933609958506, Blast_Score=115, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI71996953, Length=480, Percent_Identity=26.0416666666667, Blast_Score=108, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI193206505, Length=464, Percent_Identity=23.0603448275862, Blast_Score=99, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI17537407, Length=466, Percent_Identity=23.8197424892704, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17541374, Length=439, Percent_Identity=25.7403189066059, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI193206654, Length=452, Percent_Identity=24.3362831858407, Blast_Score=96, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24583025, Length=446, Percent_Identity=26.2331838565022, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI17137668, Length=446, Percent_Identity=26.2331838565022, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24583023, Length=446, Percent_Identity=26.2331838565022, Blast_Score=87, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001991 [H]

Pfam domain/function: PF00375 SDF [H]

EC number: NA

Molecular weight: Translated: 48369; Mature: 48369

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
>Mature Secondary Structure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HHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]