Click here to switch to the map view.

The map label for this gene is fdx [H]

Identifier: 77461570

GI number: 77461570

Start: 6009222

End: 6009473

Strand: Direct

Name: fdx [H]

Synonym: Pfl01_5349

Alternate gene names: 77461570

Gene position: 6009222-6009473 (Clockwise)

Preceding gene: 77461569

Following gene: 77461574

Centisome position: 93.33

GC content: 57.94

Gene sequence:

>252_bases
ATGTCCCTGATCATCACCGACGATTGCATCAACTGCGACGTCTGCGAACCCGAGTGCCCGAACGCCGCCATCTCCCAAGG
CGAAGAGATCTACGTGATCGACCCGAACCTGTGCACCCAATGCGTCGGCCACTACGACGAACCGCAGTGCCAGCAGGTCT
GTCCGGTGGATTGCATTCCACTGGACGAAGCCCATCCGGAGACTGAAGAACAGTTGATGGAGAAGTACCGCAAGATCACC
GGCAAGGCTTGA

Upstream 100 bases:

>100_bases
ACCGTTCAAACGGCGCCCGCGTGCACTACGGGCGCCAATGCGGCACAATTGCGCGCATTGATTCATAGCGCCCGGGCTCC
CCGCCCCGGCTGGAGTTAGC

Downstream 100 bases:

>100_bases
GCCACTGAATCCGATCGCAGCTCCCGGCTGCGATCGCGTCATTCACGCTGCTCGAATCCCTCTCCGGTGCAGCCCAGGCA
ACGCACGAACGCCGCTTTCG

Product: 4Fe-4S ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 82

Protein sequence:

>83_residues
MSLIITDDCINCDVCEPECPNAAISQGEEIYVIDPNLCTQCVGHYDEPQCQQVCPVDCIPLDEAHPETEEQLMEKYRKIT
GKA

Sequences:

>Translated_83_residues
MSLIITDDCINCDVCEPECPNAAISQGEEIYVIDPNLCTQCVGHYDEPQCQQVCPVDCIPLDEAHPETEEQLMEKYRKIT
GKA
>Mature_82_residues
SLIITDDCINCDVCEPECPNAAISQGEEIYVIDPNLCTQCVGHYDEPQCQQVCPVDCIPLDEAHPETEEQLMEKYRKITG
KA

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788914, Length=77, Percent_Identity=61.038961038961, Blast_Score=97, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9289; Mature: 9157

Theoretical pI: Translated: 3.79; Mature: 3.79

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
13.3 %Cys+Met (Translated Protein)
11.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
12.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLIITDDCINCDVCEPECPNAAISQGEEIYVIDPNLCTQCVGHYDEPQCQQVCPVDCIP
CCEEECCCCCCCCCCCCCCCCHHHCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCCCCEE
LDEAHPETEEQLMEKYRKITGKA
CCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLIITDDCINCDVCEPECPNAAISQGEEIYVIDPNLCTQCVGHYDEPQCQQVCPVDCIP
CEEECCCCCCCCCCCCCCCCHHHCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCCCCEE
LDEAHPETEEQLMEKYRKITGKA
CCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8765743; 893371; 8880900 [H]