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The map label for this gene is yggU [C]

Identifier: 77461543

GI number: 77461543

Start: 5985385

End: 5985675

Strand: Direct

Name: yggU [C]

Synonym: Pfl01_5322

Alternate gene names: 77461543

Gene position: 5985385-5985675 (Clockwise)

Preceding gene: 77461542

Following gene: 77461544

Centisome position: 92.96

GC content: 62.89

Gene sequence:

>291_bases
GTGAGCTGGTTTCGCTGGGACGGTGACGACCTGATTCTGGAATGTCACCTGCAACCGGCCGCCCGCAGCGATGATTTCTG
CGGGCTGCACGGTGATCGCCTGAAAATCCGCCTGACCGCGCCGCCGGTCGAGGGCAAGGCCAATGCGTACCTGATGGGGT
TTCTGGCCAAGGCTTTTGGGGTTTCCAAGAGCCAGGTCAGTTTGCTCAGTGGTGAGCTGAACCGGCAGAAGCGAGTGCGC
ATCGGCGCACCGAAAAAGCTGCCGGATCTGCCGGGGCTCTGCCGCCCCTGA

Upstream 100 bases:

>100_bases
CGCCGATCTTCGCCTTCCTCGTGCTGAAGCTGATCGACATGCTGGTGATCAACAACCTCGCGGCGATGACGATGATGCCG
GAAATCCTGCGCCTGCTGAT

Downstream 100 bases:

>100_bases
TCGTTGCTTGCCGCTAACCCCACCGGTCTTTAGACTTACGCCTCATTTCAACGAGAGCAGGGTCGATGCCAGCTGCCTTT
CCCCCCGATTCTGTTGGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MSWFRWDGDDLILECHLQPAARSDDFCGLHGDRLKIRLTAPPVEGKANAYLMGFLAKAFGVSKSQVSLLSGELNRQKRVR
IGAPKKLPDLPGLCRP

Sequences:

>Translated_96_residues
MSWFRWDGDDLILECHLQPAARSDDFCGLHGDRLKIRLTAPPVEGKANAYLMGFLAKAFGVSKSQVSLLSGELNRQKRVR
IGAPKKLPDLPGLCRP
>Mature_95_residues
SWFRWDGDDLILECHLQPAARSDDFCGLHGDRLKIRLTAPPVEGKANAYLMGFLAKAFGVSKSQVSLLSGELNRQKRVRI
GAPKKLPDLPGLCRP

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family

Homologues:

Organism=Escherichia coli, GI87082189, Length=88, Percent_Identity=45.4545454545455, Blast_Score=92, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y5322_PSEPF (Q3K595)

Other databases:

- EMBL:   CP000094
- RefSeq:   YP_351050.1
- HSSP:   Q8XCU6
- ProteinModelPortal:   Q3K595
- SMR:   Q3K595
- STRING:   Q3K595
- GeneID:   3715026
- GenomeReviews:   CP000094_GR
- KEGG:   pfo:Pfl01_5322
- eggNOG:   COG1872
- HOGENOM:   HBG472132
- OMA:   KASRDKI
- ProtClustDB:   PRK05090
- BioCyc:   PFLU205922:PFL_5322-MONOMER
- HAMAP:   MF_00634
- InterPro:   IPR005228
- InterPro:   IPR003746
- Gene3D:   G3DSA:3.30.1200.10
- TIGRFAMs:   TIGR00251

Pfam domain/function: PF02594 DUF167; SSF69786 DUF167

EC number: NA

Molecular weight: Translated: 10647; Mature: 10515

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWFRWDGDDLILECHLQPAARSDDFCGLHGDRLKIRLTAPPVEGKANAYLMGFLAKAFG
CCCEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHC
VSKSQVSLLSGELNRQKRVRIGAPKKLPDLPGLCRP
CCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
SWFRWDGDDLILECHLQPAARSDDFCGLHGDRLKIRLTAPPVEGKANAYLMGFLAKAFG
CCEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHC
VSKSQVSLLSGELNRQKRVRIGAPKKLPDLPGLCRP
CCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA