| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is pyrR [H]
Identifier: 77461534
GI number: 77461534
Start: 5977981
End: 5978484
Strand: Direct
Name: pyrR [H]
Synonym: Pfl01_5313
Alternate gene names: 77461534
Gene position: 5977981-5978484 (Clockwise)
Preceding gene: 77461533
Following gene: 77461535
Centisome position: 92.85
GC content: 66.67
Gene sequence:
>504_bases ATGAGCCTGCCCAATCCCGCCGATCTGATCAGCCAGATGGCGACCCGCCTCAAGGCGCACCTTGCCCAGCGTAATATCAG CGAACCGCGTTACATCGGCATCCGCACCGGCGGCGTCTGGGTCGCCCAGGCCCTGCTCGCAGAGCTGGGTAGCGACGCGC CATTGGGCACGCTGGATGTTTCCTTCTACCGCGACGACTTCAGCCAGAACGGCCTGCACCCGCAGGTGCGCCCGTCCGCC CTGCCCTTCGAAATCGAAGGCCAGCATCTGGTGCTGATCGACGACGTACTGATGAGCGGCCGGACCATCCGCGCCGCCAT GAACGAACTGTTCGACTACGGCCGCCCGGCCAGCGTGACGCTGGTCTGCCTGCTGGACCTGGATGCCGGCGAACTGCCGA TCCGCCCGAACGTGGTCGGCGCGACCCTGTCGCTGGCCGCCCACGAGCGGGTCAAGCTGTCCGGGCCGGAGCTGGCCCTC GAACTGCAAGACCTTGCCCTTTAA
Upstream 100 bases:
>100_bases CGCACTATTTGAATCCTGACAAGCGCTACGGCGCTTTTCTTTTGGTTACAACCCGAGCCCCGGTTCGCGAGAACCGGCTC GACCCCGAGAAGGAGCAACC
Downstream 100 bases:
>100_bases TCCGCCCTATTGAGAGTCCCCCTCGCGATGACGCCTCTAGATACCAAGCGCCCGCTGCAGCTCAATGATCAGGGCCAGCT GCGCCACTTCCTCTCGCTCG
Product: bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase
Products: NA
Alternate protein names: Pyrimidine operon regulatory protein; Uracil phosphoribosyltransferase; UPRTase [H]
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MSLPNPADLISQMATRLKAHLAQRNISEPRYIGIRTGGVWVAQALLAELGSDAPLGTLDVSFYRDDFSQNGLHPQVRPSA LPFEIEGQHLVLIDDVLMSGRTIRAAMNELFDYGRPASVTLVCLLDLDAGELPIRPNVVGATLSLAAHERVKLSGPELAL ELQDLAL
Sequences:
>Translated_167_residues MSLPNPADLISQMATRLKAHLAQRNISEPRYIGIRTGGVWVAQALLAELGSDAPLGTLDVSFYRDDFSQNGLHPQVRPSA LPFEIEGQHLVLIDDVLMSGRTIRAAMNELFDYGRPASVTLVCLLDLDAGELPIRPNVVGATLSLAAHERVKLSGPELAL ELQDLAL >Mature_166_residues SLPNPADLISQMATRLKAHLAQRNISEPRYIGIRTGGVWVAQALLAELGSDAPLGTLDVSFYRDDFSQNGLHPQVRPSAL PFEIEGQHLVLIDDVLMSGRTIRAAMNELFDYGRPASVTLVCLLDLDAGELPIRPNVVGATLSLAAHERVKLSGPELALE LQDLAL
Specific function: Displays also a weak uracil phosphoribosyltransferase activity which is not physiologically significant [H]
COG id: COG2065
COG function: function code F; Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000836 - InterPro: IPR023050 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.9 [H]
Molecular weight: Translated: 18090; Mature: 17959
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPNPADLISQMATRLKAHLAQRNISEPRYIGIRTGGVWVAQALLAELGSDAPLGTLDV CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCEEEH SFYRDDFSQNGLHPQVRPSALPFEIEGQHLVLIDDVLMSGRTIRAAMNELFDYGRPASVT HEECCCCCCCCCCCCCCCCCCCEEECCCEEEEEEHHHHCCCHHHHHHHHHHHCCCCCCEE LVCLLDLDAGELPIRPNVVGATLSLAAHERVKLSGPELALELQDLAL EEEEEECCCCCCCCCCCCCCCEEEHHHCCEEEECCCCEEEEEHHHCC >Mature Secondary Structure SLPNPADLISQMATRLKAHLAQRNISEPRYIGIRTGGVWVAQALLAELGSDAPLGTLDV CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCEEEH SFYRDDFSQNGLHPQVRPSALPFEIEGQHLVLIDDVLMSGRTIRAAMNELFDYGRPASVT HEECCCCCCCCCCCCCCCCCCCEEECCCEEEEEEHHHHCCCHHHHHHHHHHHCCCCCCEE LVCLLDLDAGELPIRPNVVGATLSLAAHERVKLSGPELALELQDLAL EEEEEECCCCCCCCCCCCCCCEEEHHHCCEEEECCCCEEEEEHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA