| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461507
Identifier: 77461507
GI number: 77461507
Start: 5947852
End: 5949630
Strand: Reverse
Name: 77461507
Synonym: Pfl01_5286
Alternate gene names: NA
Gene position: 5949630-5947852 (Counterclockwise)
Preceding gene: 77461510
Following gene: 77461506
Centisome position: 92.41
GC content: 64.02
Gene sequence:
>1779_bases ATGTCTGTCGGTTGGCTGCGCGCCTGTGCGCTGGTGGTGTTGGGGCTGTTTAGCGTTACGGCGCTGGCCAAGGATAAAAC CGCAATCGTGATCGGCGGCGGCCTGTCGGGCCTGACGGCGGCTTACGAACTGCAGAACAAGGGCTGGCAGGTCACGCTGC TGGAAGCCAAGCCGAGCCTGGGCGGTCGCTCGGGCATGGCCACCAGCGAGTGGATCGGCAACGACAAGACTCAACCGGTG CTGAACAAGTACGTTTCGACGTTCAAGCTGAGCACCACGCCGGCGCCTGAATTCGTTCGGACCCCGGGTTACCTGATCGA TGGCGAGTATTTCTCCGCCGCCGACCTGACCACCAAACAACCTGCCACGGCCGAAGCGCTGAAGCGCTACGAGAAAACCC GTGACGATCTGGCGCGCTCGATCGACGATCCGCAGAACCCGGCCGCGACCAACACCCTGCACGCCCTGGACCAGATCAAC GTCTCGAGCTGGCTCGACAAGCAGAACCTGCCGGCCACCGCACGTCAGCTGATCAACCAGGACATCCGCACCCACTACGA CGAGCCTTCGCGCCTGTCGTTGCTGTACTTCGCACAGCAGAGCCGGGTGTATCGCGGCGTGTCCGACCGTGACCTGCGCG CTTCGCGTCTGGTCGGTGGCAGCCCGGTGCTGGCCCAGGCCTTCGTCAAACAGCTGAAAACCATCAAGACCAACTCTCCG GTGTCCGCGATCACCCAGGACAAGGACGGCGTGACCGTCAAGGTCGGCAGCGTCGGCTACCAGGCCGATTACGTTGTGCT GGCGGTGCCGTTGCGCGCCCTCAACAAGATCCAGCTGACCCCGGCGCTGGACGCCCAGCACCTGGCTGCTATCAAGGGCA CCAACTACGGCTGGCGCGACCAGATCATGCTGAAGTTCAAGACGCCGGTGTGGGAAAGCAAGGCGCGGATGTCCGGCGAG ATCTATAGCAACACCGGTCTTGGCATGTTGTGGATCGAGCCAGCCCTGAAGGGCGGCGCCAACGTGGTGATCAACCTGTC CGGCGACAACGCCCGCGTCATGCAGGCCTTCGGCGACAAGCAGATGGTCGATCAGGTGCTGATCCGTCTGCACGCGTTTT ATCCACAGGCCCGTGGCTCGTTCACCGGCTATGAAATCCGTCGCTACAGCACCGATCCATCGACCGGCGGTTCTTACCTG GCCTTCGGCCCTGGCCAGATCAGCAAATACTGGCGTCTGTGGGAGCGTCCGCTGCAACGCATAGCGTTTGCCGGCGAACA CACCGACACCTTGTACCCGGGCACGCTGGAAGGCGCACTGCGCACCGGTCAGCGTGCAGCCAGTCAGGTTGAAGACCTGG CGGCGGGCAAATCCTTCGAACCGGTCAAGGTCGGCCCGGCAGCGGCCACCGCCGCAGCGGCGGGTGCGGGTGCGGCAGTG GCGGCGAAGAAAGGCAACTTCTTCACCAACCTGTTCGGCGGTTCGGACGACGACAAGAAGCCAGAGCCAGTGAAAGCGCC AGAGCCGGCACCCGCTCCAGCCGCCCCAGCGCCTGCACCGACTCCGGCCCCTGCGCCAGCCCCGGTGGAAGCACCGAAGC CAGCAGCTCCGGTAAAAGCCGAGCCGGCGAAGAAAGCGGCAGTCAAGCCAGCAGCGAAGAAACCGGCGGCGAAGACCGAA GCGAAAAAAGCTCCGGCCAAACCGGCGGCGAAAAAAGCTGAACCGGCGAAGAAGCCAGCGGCCAAACCGGCGGCAACCAC CGAGACCAAAGCGCAGTAA
Upstream 100 bases:
>100_bases CGCTGGCGGCGTTTTGATGGCTGACGTATTCTTCGCGGTTCTTTGGGTCGTCTGACCCGCAAAACTGCATTTTCCTACGT GTTTTTCCGGAGTTCGCTGA
Downstream 100 bases:
>100_bases GGCTTTGCGGTGAATGAAAAAGCGCGGCTTTCAGGCCGCGCTTTTTTTTGCCTGAAAGATCGCCATCGCGAGCAGGCTCG CGATGGGATCAATGCGGGCA
Product: amine oxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 592; Mature: 591
Protein sequence:
>592_residues MSVGWLRACALVVLGLFSVTALAKDKTAIVIGGGLSGLTAAYELQNKGWQVTLLEAKPSLGGRSGMATSEWIGNDKTQPV LNKYVSTFKLSTTPAPEFVRTPGYLIDGEYFSAADLTTKQPATAEALKRYEKTRDDLARSIDDPQNPAATNTLHALDQIN VSSWLDKQNLPATARQLINQDIRTHYDEPSRLSLLYFAQQSRVYRGVSDRDLRASRLVGGSPVLAQAFVKQLKTIKTNSP VSAITQDKDGVTVKVGSVGYQADYVVLAVPLRALNKIQLTPALDAQHLAAIKGTNYGWRDQIMLKFKTPVWESKARMSGE IYSNTGLGMLWIEPALKGGANVVINLSGDNARVMQAFGDKQMVDQVLIRLHAFYPQARGSFTGYEIRRYSTDPSTGGSYL AFGPGQISKYWRLWERPLQRIAFAGEHTDTLYPGTLEGALRTGQRAASQVEDLAAGKSFEPVKVGPAAATAAAAGAGAAV AAKKGNFFTNLFGGSDDDKKPEPVKAPEPAPAPAAPAPAPTPAPAPAPVEAPKPAAPVKAEPAKKAAVKPAAKKPAAKTE AKKAPAKPAAKKAEPAKKPAAKPAATTETKAQ
Sequences:
>Translated_592_residues MSVGWLRACALVVLGLFSVTALAKDKTAIVIGGGLSGLTAAYELQNKGWQVTLLEAKPSLGGRSGMATSEWIGNDKTQPV LNKYVSTFKLSTTPAPEFVRTPGYLIDGEYFSAADLTTKQPATAEALKRYEKTRDDLARSIDDPQNPAATNTLHALDQIN VSSWLDKQNLPATARQLINQDIRTHYDEPSRLSLLYFAQQSRVYRGVSDRDLRASRLVGGSPVLAQAFVKQLKTIKTNSP VSAITQDKDGVTVKVGSVGYQADYVVLAVPLRALNKIQLTPALDAQHLAAIKGTNYGWRDQIMLKFKTPVWESKARMSGE IYSNTGLGMLWIEPALKGGANVVINLSGDNARVMQAFGDKQMVDQVLIRLHAFYPQARGSFTGYEIRRYSTDPSTGGSYL AFGPGQISKYWRLWERPLQRIAFAGEHTDTLYPGTLEGALRTGQRAASQVEDLAAGKSFEPVKVGPAAATAAAAGAGAAV AAKKGNFFTNLFGGSDDDKKPEPVKAPEPAPAPAAPAPAPTPAPAPAPVEAPKPAAPVKAEPAKKAAVKPAAKKPAAKTE AKKAPAKPAAKKAEPAKKPAAKPAATTETKAQ >Mature_591_residues SVGWLRACALVVLGLFSVTALAKDKTAIVIGGGLSGLTAAYELQNKGWQVTLLEAKPSLGGRSGMATSEWIGNDKTQPVL NKYVSTFKLSTTPAPEFVRTPGYLIDGEYFSAADLTTKQPATAEALKRYEKTRDDLARSIDDPQNPAATNTLHALDQINV SSWLDKQNLPATARQLINQDIRTHYDEPSRLSLLYFAQQSRVYRGVSDRDLRASRLVGGSPVLAQAFVKQLKTIKTNSPV SAITQDKDGVTVKVGSVGYQADYVVLAVPLRALNKIQLTPALDAQHLAAIKGTNYGWRDQIMLKFKTPVWESKARMSGEI YSNTGLGMLWIEPALKGGANVVINLSGDNARVMQAFGDKQMVDQVLIRLHAFYPQARGSFTGYEIRRYSTDPSTGGSYLA FGPGQISKYWRLWERPLQRIAFAGEHTDTLYPGTLEGALRTGQRAASQVEDLAAGKSFEPVKVGPAAATAAAAGAGAAVA AKKGNFFTNLFGGSDDDKKPEPVKAPEPAPAPAAPAPAPTPAPAPAPVEAPKPAAPVKAEPAKKAAVKPAAKKPAAKTEA KKAPAKPAAKKAEPAKKPAAKPAATTETKAQ
Specific function: Unknown
COG id: COG1231
COG function: function code E; Monoamine oxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flavin monoamine oxidase family [H]
Homologues:
Organism=Homo sapiens, GI4557735, Length=465, Percent_Identity=25.3763440860215, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI38202207, Length=449, Percent_Identity=25.1670378619154, Blast_Score=99, Evalue=2e-20, Organism=Homo sapiens, GI27477089, Length=480, Percent_Identity=24.375, Blast_Score=89, Evalue=2e-17, Organism=Homo sapiens, GI23821023, Length=482, Percent_Identity=24.4813278008299, Blast_Score=88, Evalue=3e-17, Organism=Homo sapiens, GI116256451, Length=246, Percent_Identity=28.8617886178862, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI58761546, Length=223, Percent_Identity=25.1121076233184, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI58761544, Length=223, Percent_Identity=25.1121076233184, Blast_Score=72, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001613 - InterPro: IPR002937 [H]
Pfam domain/function: PF01593 Amino_oxidase [H]
EC number: NA
Molecular weight: Translated: 63032; Mature: 62901
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVGWLRACALVVLGLFSVTALAKDKTAIVIGGGLSGLTAAYELQNKGWQVTLLEAKPSL CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHEECCCCCEEEEEECCCCC GGRSGMATSEWIGNDKTQPVLNKYVSTFKLSTTPAPEFVRTPGYLIDGEYFSAADLTTKQ CCCCCCCHHHHCCCCCCHHHHHHHHHHEEECCCCCCHHHCCCCEEECCCEECCCCCCCCC PATAEALKRYEKTRDDLARSIDDPQNPAATNTLHALDQINVSSWLDKQNLPATARQLINQ CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHH DIRTHYDEPSRLSLLYFAQQSRVYRGVSDRDLRASRLVGGSPVLAQAFVKQLKTIKTNSP HHHHCCCCCCCEEEEEEEHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCC VSAITQDKDGVTVKVGSVGYQADYVVLAVPLRALNKIQLTPALDAQHLAAIKGTNYGWRD CHHEECCCCCCEEEECCCCCCCCEEEEEECHHHHCEEEECCCCCHHHHHHCCCCCCCCCC QIMLKFKTPVWESKARMSGEIYSNTGLGMLWIEPALKGGANVVINLSGDNARVMQAFGDK EEEEEECCCCHHHHHHCCCEEECCCCCEEEEECCCCCCCCEEEEEECCCCHHHHHHHCCH QMVDQVLIRLHAFYPQARGSFTGYEIRRYSTDPSTGGSYLAFGPGQISKYWRLWERPLQR HHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHH IAFAGEHTDTLYPGTLEGALRTGQRAASQVEDLAAGKSFEPVKVGPAAATAAAAGAGAAV HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHCCCCCEE AAKKGNFFTNLFGGSDDDKKPEPVKAPEPAPAPAAPAPAPTPAPAPAPVEAPKPAAPVKA EECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EPAKKAAVKPAAKKPAAKTEAKKAPAKPAAKKAEPAKKPAAKPAATTETKAQ CCCHHHHCCCCCCCCCHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SVGWLRACALVVLGLFSVTALAKDKTAIVIGGGLSGLTAAYELQNKGWQVTLLEAKPSL CCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHEECCCCCEEEEEECCCCC GGRSGMATSEWIGNDKTQPVLNKYVSTFKLSTTPAPEFVRTPGYLIDGEYFSAADLTTKQ CCCCCCCHHHHCCCCCCHHHHHHHHHHEEECCCCCCHHHCCCCEEECCCEECCCCCCCCC PATAEALKRYEKTRDDLARSIDDPQNPAATNTLHALDQINVSSWLDKQNLPATARQLINQ CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHH DIRTHYDEPSRLSLLYFAQQSRVYRGVSDRDLRASRLVGGSPVLAQAFVKQLKTIKTNSP HHHHCCCCCCCEEEEEEEHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCC VSAITQDKDGVTVKVGSVGYQADYVVLAVPLRALNKIQLTPALDAQHLAAIKGTNYGWRD CHHEECCCCCCEEEECCCCCCCCEEEEEECHHHHCEEEECCCCCHHHHHHCCCCCCCCCC QIMLKFKTPVWESKARMSGEIYSNTGLGMLWIEPALKGGANVVINLSGDNARVMQAFGDK EEEEEECCCCHHHHHHCCCEEECCCCCEEEEECCCCCCCCEEEEEECCCCHHHHHHHCCH QMVDQVLIRLHAFYPQARGSFTGYEIRRYSTDPSTGGSYLAFGPGQISKYWRLWERPLQR HHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHH IAFAGEHTDTLYPGTLEGALRTGQRAASQVEDLAAGKSFEPVKVGPAAATAAAAGAGAAV HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHCCCCCEE AAKKGNFFTNLFGGSDDDKKPEPVKAPEPAPAPAAPAPAPTPAPAPAPVEAPKPAAPVKA EECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EPAKKAAVKPAAKKPAAKTEAKKAPAKPAAKKAEPAKKPAAKPAATTETKAQ CCCHHHHCCCCCCCCCHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]