Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77461400

Identifier: 77461400

GI number: 77461400

Start: 5824050

End: 5825951

Strand: Direct

Name: 77461400

Synonym: Pfl01_5179

Alternate gene names: NA

Gene position: 5824050-5825951 (Clockwise)

Preceding gene: 77461399

Following gene: 77461401

Centisome position: 90.46

GC content: 63.93

Gene sequence:

>1902_bases
GTGAGCCTATTAGAAGAAAACCAATCCACAGACCTGGAAAAAATGGTCGGCCTGAGCCGTCGCGGGTTCATCAGCGCCGG
CGCGCTGTGCGGCGCGGCGATGTTCCTCGGCGGCAACCTGCTGAGCCGCAGCGTGCTGGCCGCCAGTGTCAGCGCCGGCA
ACAGCCGTCTGCTCGGCTTCGACAGCATTCCGGCGGCCACCACCGACACCATCAGCCTGCCCAAGGGCTACAAGTCGTCG
GTGCTGATCAGCTGGGGCCAGCCGCTGCACAAGAACGGCCCGGCCTTCGACCCGAGCGGCAATGGAACCGCGGCCGCACA
GGAAGTGCAGTTCGGCGACAACAACGACGGCATGAGCCTGTTCGAATTCCCGGGCGAGAAAAACCGCGCGTTGATGGCGA
TCAACAACGAATACACCAACTACCGCTACCTCTACCCGCACGGCGGCATGCCGCAGTCGGCCGAGGACGTGCGCAAGGCT
CTGGCCTGCGAAGGCGTGTCGGTGATCGAAGTGCAGCGCAAGAACGGCCAGTGGCAGTTCGTCCAGGGCTCGCGCTACAA
CCGGCGCATCCACGGCAACTCGCCGCTGCGTATCAGCGGCCCGGCCGCCGGTCACGAGCTGATGAAAACCAGCGCCGACA
AGCACGGCAAGAAAGTCCTCGGCACCTTCCAGAACTGCGCCAACGGCAAAACGCCGTGGGGCACTTATCTGACCTGCGAA
GAGAACTTCACCGACTGCTTCGGCAGCAGCAACGCCCAGCAGCAGTTCGACCCGGCGCAGAAACGCTACGGTGTGTCGGC
CGCCAGCCGGGAGATCAACTGGCATCCGTTCGATCCGCGCTTCGACATGGCGAAGAACCCCAACGAGCTCAACCGTCACG
GCTGGGTGGTGGAGATCGATCCGTTCGACCCGCAATCGACCCCGGTCAAACGCACCGCGCTGGGCCGCTTCAAGCATGAA
AACGCCGCACTGGCCGAGACCGACGACGGTCGCGCCGTGGTGTACATGGGCGACGACGAACGCGGCGAGTTCATCTACAA
ATTCGTCAGCCGCGACAAGATCAATCACCGCAACGCCAAAGCCAACCGCGACATCCTCGATCACGGCACGCTGTACGTCG
CCAGGTTCGATGCCGGCGACGGCAATCCGGATCACCCGAAAGGCCAGGGCCAGTGGATCGAACTGACCCACGGCAAGAAC
GGCATCGACGCCAGCAGCGGTTTCGCCGATCAGGCCGAAGTGCTGATTCATGCCCGACTCGCGGCCAGCGTGGTTGGCGC
CACGCGCATGGACCGTCCGGAGTGGATCGTGGTCAGCCCGAAAGACGGCCAGGTTTATTGCACCCTGACCAACAACGCCA
AGCGCGGCGAAGACGGCCAACCGGTGGGCGGGCCGAACCCGCGCGAGAAGAACGTCTACGGGCAGATCCTGCGCTGGCGC
ACCGACCGCGACGATCACGCGTCGAAGACTTTTGCCTGGGATCTGTTCGTGGTCGCCGGCAACCCGAGCGTCCACGCCGG
TACGCCGAAAGGCGGTTCGTCGAATATCACGCCGCAGAACATGTTCAACAGCCCCGACGGTCTCGGCTTCGACAAGGCCG
GGCGGTTGTGGATCCTCACCGACGGAGATTCGAGCAACGCCGGTGATTTTGCCGGGATGGGCAACAACCAGATGCTCTGC
GCCGATCCTGCGACCGGGGAAATTCGCCGGTTCATGGTCGGGCCGATCGGCTGTGAAGTCACCGGGATCAGTTTCTCGCC
GGATCAGAAAACCCTGTTCGTGGGGATTCAGCACCCGGGCGAGAACGGCGGTTCGACCTTCCCCGAGCACCTGCCGAACG
GCAAGCCACGCTCATCGGTGATGGCGATTACCCGTGAAGATGGCGGGATCGTCGGCGCCTGA

Upstream 100 bases:

>100_bases
GTCCAATGTGCTGCTCGGAACACCGCTCTAAACAGCGCTGCAACGAAAGCGTCATCGACCCGCATTAAGGTGGCTGCCAA
AACCATGCAGGGAGCCTGAT

Downstream 100 bases:

>100_bases
TCGGGCGACGCTCTGCTCGTTCCCGTGCGCTGCGCGGGAACGATCCCACTCAAGACCGCCCGTCTGCGCTACCATGCTGA
GCCGGACGCGGCAGCCTGCT

Product: twin-arginine translocation pathway signal protein

Products: NA

Alternate protein names: Phosphatase; Tat Pathway Signal Sequence Domain-Containing Protein; Tat Pathway Signal Sequence Domain Protein; Twin-Arginine Translocation Pathway Signal Protein; UxpB Protein; DTDP-Glucose 4 6-Dehydratase; Twin Arginine Translocation Pathway Signal Protein; Phosphatase-Like Protein; DTDP-D-Glucose 4 6-Dehydratase; Glutamate-Cysteine Ligase/Putative Amino Acid Ligase; Cell Surface Protein; Alkaline Phosphatase Family Protein; Exported Protein

Number of amino acids: Translated: 633; Mature: 632

Protein sequence:

>633_residues
MSLLEENQSTDLEKMVGLSRRGFISAGALCGAAMFLGGNLLSRSVLAASVSAGNSRLLGFDSIPAATTDTISLPKGYKSS
VLISWGQPLHKNGPAFDPSGNGTAAAQEVQFGDNNDGMSLFEFPGEKNRALMAINNEYTNYRYLYPHGGMPQSAEDVRKA
LACEGVSVIEVQRKNGQWQFVQGSRYNRRIHGNSPLRISGPAAGHELMKTSADKHGKKVLGTFQNCANGKTPWGTYLTCE
ENFTDCFGSSNAQQQFDPAQKRYGVSAASREINWHPFDPRFDMAKNPNELNRHGWVVEIDPFDPQSTPVKRTALGRFKHE
NAALAETDDGRAVVYMGDDERGEFIYKFVSRDKINHRNAKANRDILDHGTLYVARFDAGDGNPDHPKGQGQWIELTHGKN
GIDASSGFADQAEVLIHARLAASVVGATRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWR
TDRDDHASKTFAWDLFVVAGNPSVHAGTPKGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLC
ADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQHPGENGGSTFPEHLPNGKPRSSVMAITREDGGIVGA

Sequences:

>Translated_633_residues
MSLLEENQSTDLEKMVGLSRRGFISAGALCGAAMFLGGNLLSRSVLAASVSAGNSRLLGFDSIPAATTDTISLPKGYKSS
VLISWGQPLHKNGPAFDPSGNGTAAAQEVQFGDNNDGMSLFEFPGEKNRALMAINNEYTNYRYLYPHGGMPQSAEDVRKA
LACEGVSVIEVQRKNGQWQFVQGSRYNRRIHGNSPLRISGPAAGHELMKTSADKHGKKVLGTFQNCANGKTPWGTYLTCE
ENFTDCFGSSNAQQQFDPAQKRYGVSAASREINWHPFDPRFDMAKNPNELNRHGWVVEIDPFDPQSTPVKRTALGRFKHE
NAALAETDDGRAVVYMGDDERGEFIYKFVSRDKINHRNAKANRDILDHGTLYVARFDAGDGNPDHPKGQGQWIELTHGKN
GIDASSGFADQAEVLIHARLAASVVGATRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWR
TDRDDHASKTFAWDLFVVAGNPSVHAGTPKGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLC
ADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQHPGENGGSTFPEHLPNGKPRSSVMAITREDGGIVGA
>Mature_632_residues
SLLEENQSTDLEKMVGLSRRGFISAGALCGAAMFLGGNLLSRSVLAASVSAGNSRLLGFDSIPAATTDTISLPKGYKSSV
LISWGQPLHKNGPAFDPSGNGTAAAQEVQFGDNNDGMSLFEFPGEKNRALMAINNEYTNYRYLYPHGGMPQSAEDVRKAL
ACEGVSVIEVQRKNGQWQFVQGSRYNRRIHGNSPLRISGPAAGHELMKTSADKHGKKVLGTFQNCANGKTPWGTYLTCEE
NFTDCFGSSNAQQQFDPAQKRYGVSAASREINWHPFDPRFDMAKNPNELNRHGWVVEIDPFDPQSTPVKRTALGRFKHEN
AALAETDDGRAVVYMGDDERGEFIYKFVSRDKINHRNAKANRDILDHGTLYVARFDAGDGNPDHPKGQGQWIELTHGKNG
IDASSGFADQAEVLIHARLAASVVGATRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRT
DRDDHASKTFAWDLFVVAGNPSVHAGTPKGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCA
DPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQHPGENGGSTFPEHLPNGKPRSSVMAITREDGGIVGA

Specific function: Unknown

COG id: COG3211

COG function: function code R; Predicted phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68624; Mature: 68493

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLEENQSTDLEKMVGLSRRGFISAGALCGAAMFLGGNLLSRSVLAASVSAGNSRLLGF
CCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHEEECCCCCEEEEC
DSIPAATTDTISLPKGYKSSVLISWGQPLHKNGPAFDPSGNGTAAAQEVQFGDNNDGMSL
CCCCCCCCCEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEE
FEFPGEKNRALMAINNEYTNYRYLYPHGGMPQSAEDVRKALACEGVSVIEVQRKNGQWQF
EECCCCCCCEEEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCEEE
VQGSRYNRRIHGNSPLRISGPAAGHELMKTSADKHGKKVLGTFQNCANGKTPWGTYLTCE
EECCCCCCEECCCCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEC
ENFTDCFGSSNAQQQFDPAQKRYGVSAASREINWHPFDPRFDMAKNPNELNRHGWVVEID
CCCHHHHCCCCCHHHCCHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEC
PFDPQSTPVKRTALGRFKHENAALAETDDGRAVVYMGDDERGEFIYKFVSRDKINHRNAK
CCCCCCCCCHHHHHHHHCCCCCCEEECCCCCEEEEECCCCCCHHHHEEHHHCCCCCCCCC
ANRDILDHGTLYVARFDAGDGNPDHPKGQGQWIELTHGKNGIDASSGFADQAEVLIHARL
CCCCEECCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHEEHHHH
AASVVGATRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWR
HHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHEEC
TDRDDHASKTFAWDLFVVAGNPSVHAGTPKGGSSNITPQNMFNSPDGLGFDKAGRLWILT
CCCCCCCCCEEEEEEEEEECCCCEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEE
DGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQHPG
CCCCCCCCCCCCCCCCCEEEECCCCCHHHHEEECCCCEEEEEEEECCCCEEEEEEEECCC
ENGGSTFPEHLPNGKPRSSVMAITREDGGIVGA
CCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCC
>Mature Secondary Structure 
SLLEENQSTDLEKMVGLSRRGFISAGALCGAAMFLGGNLLSRSVLAASVSAGNSRLLGF
CCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHEEECCCCCEEEEC
DSIPAATTDTISLPKGYKSSVLISWGQPLHKNGPAFDPSGNGTAAAQEVQFGDNNDGMSL
CCCCCCCCCEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEE
FEFPGEKNRALMAINNEYTNYRYLYPHGGMPQSAEDVRKALACEGVSVIEVQRKNGQWQF
EECCCCCCCEEEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCEEE
VQGSRYNRRIHGNSPLRISGPAAGHELMKTSADKHGKKVLGTFQNCANGKTPWGTYLTCE
EECCCCCCEECCCCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEC
ENFTDCFGSSNAQQQFDPAQKRYGVSAASREINWHPFDPRFDMAKNPNELNRHGWVVEID
CCCHHHHCCCCCHHHCCHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEC
PFDPQSTPVKRTALGRFKHENAALAETDDGRAVVYMGDDERGEFIYKFVSRDKINHRNAK
CCCCCCCCCHHHHHHHHCCCCCCEEECCCCCEEEEECCCCCCHHHHEEHHHCCCCCCCCC
ANRDILDHGTLYVARFDAGDGNPDHPKGQGQWIELTHGKNGIDASSGFADQAEVLIHARL
CCCCEECCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHEEHHHH
AASVVGATRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWR
HHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHEEC
TDRDDHASKTFAWDLFVVAGNPSVHAGTPKGGSSNITPQNMFNSPDGLGFDKAGRLWILT
CCCCCCCCCEEEEEEEEEECCCCEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEE
DGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQHPG
CCCCCCCCCCCCCCCCCEEEECCCCCHHHHEEECCCCEEEEEEEECCCCEEEEEEEECCC
ENGGSTFPEHLPNGKPRSSVMAITREDGGIVGA
CCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA