| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461400
Identifier: 77461400
GI number: 77461400
Start: 5824050
End: 5825951
Strand: Direct
Name: 77461400
Synonym: Pfl01_5179
Alternate gene names: NA
Gene position: 5824050-5825951 (Clockwise)
Preceding gene: 77461399
Following gene: 77461401
Centisome position: 90.46
GC content: 63.93
Gene sequence:
>1902_bases GTGAGCCTATTAGAAGAAAACCAATCCACAGACCTGGAAAAAATGGTCGGCCTGAGCCGTCGCGGGTTCATCAGCGCCGG CGCGCTGTGCGGCGCGGCGATGTTCCTCGGCGGCAACCTGCTGAGCCGCAGCGTGCTGGCCGCCAGTGTCAGCGCCGGCA ACAGCCGTCTGCTCGGCTTCGACAGCATTCCGGCGGCCACCACCGACACCATCAGCCTGCCCAAGGGCTACAAGTCGTCG GTGCTGATCAGCTGGGGCCAGCCGCTGCACAAGAACGGCCCGGCCTTCGACCCGAGCGGCAATGGAACCGCGGCCGCACA GGAAGTGCAGTTCGGCGACAACAACGACGGCATGAGCCTGTTCGAATTCCCGGGCGAGAAAAACCGCGCGTTGATGGCGA TCAACAACGAATACACCAACTACCGCTACCTCTACCCGCACGGCGGCATGCCGCAGTCGGCCGAGGACGTGCGCAAGGCT CTGGCCTGCGAAGGCGTGTCGGTGATCGAAGTGCAGCGCAAGAACGGCCAGTGGCAGTTCGTCCAGGGCTCGCGCTACAA CCGGCGCATCCACGGCAACTCGCCGCTGCGTATCAGCGGCCCGGCCGCCGGTCACGAGCTGATGAAAACCAGCGCCGACA AGCACGGCAAGAAAGTCCTCGGCACCTTCCAGAACTGCGCCAACGGCAAAACGCCGTGGGGCACTTATCTGACCTGCGAA GAGAACTTCACCGACTGCTTCGGCAGCAGCAACGCCCAGCAGCAGTTCGACCCGGCGCAGAAACGCTACGGTGTGTCGGC CGCCAGCCGGGAGATCAACTGGCATCCGTTCGATCCGCGCTTCGACATGGCGAAGAACCCCAACGAGCTCAACCGTCACG GCTGGGTGGTGGAGATCGATCCGTTCGACCCGCAATCGACCCCGGTCAAACGCACCGCGCTGGGCCGCTTCAAGCATGAA AACGCCGCACTGGCCGAGACCGACGACGGTCGCGCCGTGGTGTACATGGGCGACGACGAACGCGGCGAGTTCATCTACAA ATTCGTCAGCCGCGACAAGATCAATCACCGCAACGCCAAAGCCAACCGCGACATCCTCGATCACGGCACGCTGTACGTCG CCAGGTTCGATGCCGGCGACGGCAATCCGGATCACCCGAAAGGCCAGGGCCAGTGGATCGAACTGACCCACGGCAAGAAC GGCATCGACGCCAGCAGCGGTTTCGCCGATCAGGCCGAAGTGCTGATTCATGCCCGACTCGCGGCCAGCGTGGTTGGCGC CACGCGCATGGACCGTCCGGAGTGGATCGTGGTCAGCCCGAAAGACGGCCAGGTTTATTGCACCCTGACCAACAACGCCA AGCGCGGCGAAGACGGCCAACCGGTGGGCGGGCCGAACCCGCGCGAGAAGAACGTCTACGGGCAGATCCTGCGCTGGCGC ACCGACCGCGACGATCACGCGTCGAAGACTTTTGCCTGGGATCTGTTCGTGGTCGCCGGCAACCCGAGCGTCCACGCCGG TACGCCGAAAGGCGGTTCGTCGAATATCACGCCGCAGAACATGTTCAACAGCCCCGACGGTCTCGGCTTCGACAAGGCCG GGCGGTTGTGGATCCTCACCGACGGAGATTCGAGCAACGCCGGTGATTTTGCCGGGATGGGCAACAACCAGATGCTCTGC GCCGATCCTGCGACCGGGGAAATTCGCCGGTTCATGGTCGGGCCGATCGGCTGTGAAGTCACCGGGATCAGTTTCTCGCC GGATCAGAAAACCCTGTTCGTGGGGATTCAGCACCCGGGCGAGAACGGCGGTTCGACCTTCCCCGAGCACCTGCCGAACG GCAAGCCACGCTCATCGGTGATGGCGATTACCCGTGAAGATGGCGGGATCGTCGGCGCCTGA
Upstream 100 bases:
>100_bases GTCCAATGTGCTGCTCGGAACACCGCTCTAAACAGCGCTGCAACGAAAGCGTCATCGACCCGCATTAAGGTGGCTGCCAA AACCATGCAGGGAGCCTGAT
Downstream 100 bases:
>100_bases TCGGGCGACGCTCTGCTCGTTCCCGTGCGCTGCGCGGGAACGATCCCACTCAAGACCGCCCGTCTGCGCTACCATGCTGA GCCGGACGCGGCAGCCTGCT
Product: twin-arginine translocation pathway signal protein
Products: NA
Alternate protein names: Phosphatase; Tat Pathway Signal Sequence Domain-Containing Protein; Tat Pathway Signal Sequence Domain Protein; Twin-Arginine Translocation Pathway Signal Protein; UxpB Protein; DTDP-Glucose 4 6-Dehydratase; Twin Arginine Translocation Pathway Signal Protein; Phosphatase-Like Protein; DTDP-D-Glucose 4 6-Dehydratase; Glutamate-Cysteine Ligase/Putative Amino Acid Ligase; Cell Surface Protein; Alkaline Phosphatase Family Protein; Exported Protein
Number of amino acids: Translated: 633; Mature: 632
Protein sequence:
>633_residues MSLLEENQSTDLEKMVGLSRRGFISAGALCGAAMFLGGNLLSRSVLAASVSAGNSRLLGFDSIPAATTDTISLPKGYKSS VLISWGQPLHKNGPAFDPSGNGTAAAQEVQFGDNNDGMSLFEFPGEKNRALMAINNEYTNYRYLYPHGGMPQSAEDVRKA LACEGVSVIEVQRKNGQWQFVQGSRYNRRIHGNSPLRISGPAAGHELMKTSADKHGKKVLGTFQNCANGKTPWGTYLTCE ENFTDCFGSSNAQQQFDPAQKRYGVSAASREINWHPFDPRFDMAKNPNELNRHGWVVEIDPFDPQSTPVKRTALGRFKHE NAALAETDDGRAVVYMGDDERGEFIYKFVSRDKINHRNAKANRDILDHGTLYVARFDAGDGNPDHPKGQGQWIELTHGKN GIDASSGFADQAEVLIHARLAASVVGATRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWR TDRDDHASKTFAWDLFVVAGNPSVHAGTPKGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLC ADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQHPGENGGSTFPEHLPNGKPRSSVMAITREDGGIVGA
Sequences:
>Translated_633_residues MSLLEENQSTDLEKMVGLSRRGFISAGALCGAAMFLGGNLLSRSVLAASVSAGNSRLLGFDSIPAATTDTISLPKGYKSS VLISWGQPLHKNGPAFDPSGNGTAAAQEVQFGDNNDGMSLFEFPGEKNRALMAINNEYTNYRYLYPHGGMPQSAEDVRKA LACEGVSVIEVQRKNGQWQFVQGSRYNRRIHGNSPLRISGPAAGHELMKTSADKHGKKVLGTFQNCANGKTPWGTYLTCE ENFTDCFGSSNAQQQFDPAQKRYGVSAASREINWHPFDPRFDMAKNPNELNRHGWVVEIDPFDPQSTPVKRTALGRFKHE NAALAETDDGRAVVYMGDDERGEFIYKFVSRDKINHRNAKANRDILDHGTLYVARFDAGDGNPDHPKGQGQWIELTHGKN GIDASSGFADQAEVLIHARLAASVVGATRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWR TDRDDHASKTFAWDLFVVAGNPSVHAGTPKGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLC ADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQHPGENGGSTFPEHLPNGKPRSSVMAITREDGGIVGA >Mature_632_residues SLLEENQSTDLEKMVGLSRRGFISAGALCGAAMFLGGNLLSRSVLAASVSAGNSRLLGFDSIPAATTDTISLPKGYKSSV LISWGQPLHKNGPAFDPSGNGTAAAQEVQFGDNNDGMSLFEFPGEKNRALMAINNEYTNYRYLYPHGGMPQSAEDVRKAL ACEGVSVIEVQRKNGQWQFVQGSRYNRRIHGNSPLRISGPAAGHELMKTSADKHGKKVLGTFQNCANGKTPWGTYLTCEE NFTDCFGSSNAQQQFDPAQKRYGVSAASREINWHPFDPRFDMAKNPNELNRHGWVVEIDPFDPQSTPVKRTALGRFKHEN AALAETDDGRAVVYMGDDERGEFIYKFVSRDKINHRNAKANRDILDHGTLYVARFDAGDGNPDHPKGQGQWIELTHGKNG IDASSGFADQAEVLIHARLAASVVGATRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRT DRDDHASKTFAWDLFVVAGNPSVHAGTPKGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCA DPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQHPGENGGSTFPEHLPNGKPRSSVMAITREDGGIVGA
Specific function: Unknown
COG id: COG3211
COG function: function code R; Predicted phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68624; Mature: 68493
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLEENQSTDLEKMVGLSRRGFISAGALCGAAMFLGGNLLSRSVLAASVSAGNSRLLGF CCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHEEECCCCCEEEEC DSIPAATTDTISLPKGYKSSVLISWGQPLHKNGPAFDPSGNGTAAAQEVQFGDNNDGMSL CCCCCCCCCEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEE FEFPGEKNRALMAINNEYTNYRYLYPHGGMPQSAEDVRKALACEGVSVIEVQRKNGQWQF EECCCCCCCEEEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCEEE VQGSRYNRRIHGNSPLRISGPAAGHELMKTSADKHGKKVLGTFQNCANGKTPWGTYLTCE EECCCCCCEECCCCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEC ENFTDCFGSSNAQQQFDPAQKRYGVSAASREINWHPFDPRFDMAKNPNELNRHGWVVEID CCCHHHHCCCCCHHHCCHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEC PFDPQSTPVKRTALGRFKHENAALAETDDGRAVVYMGDDERGEFIYKFVSRDKINHRNAK CCCCCCCCCHHHHHHHHCCCCCCEEECCCCCEEEEECCCCCCHHHHEEHHHCCCCCCCCC ANRDILDHGTLYVARFDAGDGNPDHPKGQGQWIELTHGKNGIDASSGFADQAEVLIHARL CCCCEECCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHEEHHHH AASVVGATRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWR HHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHEEC TDRDDHASKTFAWDLFVVAGNPSVHAGTPKGGSSNITPQNMFNSPDGLGFDKAGRLWILT CCCCCCCCCEEEEEEEEEECCCCEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEE DGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQHPG CCCCCCCCCCCCCCCCCEEEECCCCCHHHHEEECCCCEEEEEEEECCCCEEEEEEEECCC ENGGSTFPEHLPNGKPRSSVMAITREDGGIVGA CCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure SLLEENQSTDLEKMVGLSRRGFISAGALCGAAMFLGGNLLSRSVLAASVSAGNSRLLGF CCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHEEECCCCCEEEEC DSIPAATTDTISLPKGYKSSVLISWGQPLHKNGPAFDPSGNGTAAAQEVQFGDNNDGMSL CCCCCCCCCEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEE FEFPGEKNRALMAINNEYTNYRYLYPHGGMPQSAEDVRKALACEGVSVIEVQRKNGQWQF EECCCCCCCEEEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCEEE VQGSRYNRRIHGNSPLRISGPAAGHELMKTSADKHGKKVLGTFQNCANGKTPWGTYLTCE EECCCCCCEECCCCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEC ENFTDCFGSSNAQQQFDPAQKRYGVSAASREINWHPFDPRFDMAKNPNELNRHGWVVEID CCCHHHHCCCCCHHHCCHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEC PFDPQSTPVKRTALGRFKHENAALAETDDGRAVVYMGDDERGEFIYKFVSRDKINHRNAK CCCCCCCCCHHHHHHHHCCCCCCEEECCCCCEEEEECCCCCCHHHHEEHHHCCCCCCCCC ANRDILDHGTLYVARFDAGDGNPDHPKGQGQWIELTHGKNGIDASSGFADQAEVLIHARL CCCCEECCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHEEHHHH AASVVGATRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWR HHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHEEC TDRDDHASKTFAWDLFVVAGNPSVHAGTPKGGSSNITPQNMFNSPDGLGFDKAGRLWILT CCCCCCCCCEEEEEEEEEECCCCEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEE DGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQHPG CCCCCCCCCCCCCCCCCEEEECCCCCHHHHEEECCCCEEEEEEEECCCCEEEEEEEECCC ENGGSTFPEHLPNGKPRSSVMAITREDGGIVGA CCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA