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The map label for this gene is ycgB [H]

Identifier: 77461362

GI number: 77461362

Start: 5777436

End: 5779007

Strand: Direct

Name: ycgB [H]

Synonym: Pfl01_5141

Alternate gene names: 77461362

Gene position: 5777436-5779007 (Clockwise)

Preceding gene: 77461361

Following gene: 77461363

Centisome position: 89.73

GC content: 59.03

Gene sequence:

>1572_bases
ATGACCGCCAAGACCGCCAAAGAGCAGAAGCGCCAACCCATTTCCACCGGCTCGGAATGGACATTCGAGCTGATCCAGAC
GTACGACCGTGAAATCGCCCGTATCGCGGCCCGTTATGCCCTGGATACCTACCCCAACCAGATCGAAGTGATTACCGCCG
AGCAGATGATGGACGCCTACGCGTCGGTCGGCATGCCGCTGGGCTATCACCACTGGTCCTACGGCAAGCACTTCCTCAGC
ACCGAAAAATCCTACAGTCGCGGGCAGATGGGGCTGGCGTACGAGATCGTGATCAACTCGGATCCGTGCATCGCCTACCT
GATGGAAGAAAACACCATCTGCATGCAGGCACTGGTGGTCGCGCATGCCTGCTACGGCCACAACAGCTTCTTCAAGGGCA
ACTATCTGTTCCGCACCTGGACCGACGCCAGTTCGATCATCGATTACCTGGTGTTCGCCAAGCAGTACATCATGCAGTGC
GAGGAGCGCCACGGGATCGATGCCGTGGAGGATCTGCTGGATTCCTGCCACGCCCTGATGAACTACGGTGTCGACCGCTA
CAAACGTCCGTACCCGATTTCCGCCGAAGAAGAGCGGCGTCGGCAAAAGGATCGCGAAGAGCACCTGCAGAAGCAGATCA
ACGACCTGTGGCGCACCATACCCAAAGGCGCGGACAAATACAGCGACAAGGACAACGCTCGTTTCCCGGCCGAACCGCAG
GAAAACATCCTGTATTTCATCGAGAAACACGCCCCGCTGCTGGAACCCTGGCAGCGCGAGATCGTGCGGATCGTGCGCAA
GATCGCCCAGTATTTCTATCCGCAGCGCCAGACTCAGGTGATGAACGAAGGCTGGGCGACGTTCTGGCACTACACGCTGA
TGAACGACCTGTACGACGAAGGCCTGGTGACGGACGGCTTCATGATGGAGTTCCTGACGTCCCACACCAGCGTGGTGTTC
CAGCCGGGGTTCGACAGCCCTTATTACAACGGTATCAACCCTTATGCGCTGGGTTTTGCGATGTATCGCGACATCCGGCG
CATGTGCGAAGAGCCCACGGAAGAAGACCGCCGCTGGTTCCCGGAAATCGCCGGCAGCGACTGGCTGTCGACCATCAAGT
TCGCCATGAGCAGCTTCAAGGATGAGAGCTTCATCCTGCAGTACCTGTCACCCAAGGTGATCCGCGACCTGAAGCTGTTC
AGCATCCTCGATGACGATCAGAAGGACGATCTGCTGGTGCCCGCAATCCATGACGAGGGCGGTTACCGGATCATCCGCGA
GACCCTGGCCGCGCAATACAACCTGGGCAACCGCGAACCGAACGTGCAGATCTACAGCATCGACCGCCGCGGCGACCGCT
CGCTGACCCTGCGCCACCAGCAACACGACCGCAAACCGCTGGGCGATTCCACCGAGGAGGTCCTCAAACACCTGCACCGG
CTGTGGGGCTTCGACATTCATCTGGAAACCCTGCAAGGCGACCAGATCATGAAGACCCATCATGTTCCGCCCCGCAGCGA
ACACAGCGAGGGGGATTACGGTCGACTCGACCTGGCCGTCATTCATCTTTGA

Upstream 100 bases:

>100_bases
TCGCCGAAGCTTTTTCCGACACTTTTGCCCAGCAACAACTGGTCTCGGCCGGGGATATCTATCCGGTCTTCCGTGAACTC
TTCCAGCGCAGGTTAGTGAC

Downstream 100 bases:

>100_bases
CTCCGTTGAGACCTCCAGAAGTCCGGCGCAAGGGTTATCCTGTCGGGCCAACGGAGGTTTTTTATGCAGATTTACAAGGT
CGGCGGTGCGGTACGTGATC

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 523; Mature: 522

Protein sequence:

>523_residues
MTAKTAKEQKRQPISTGSEWTFELIQTYDREIARIAARYALDTYPNQIEVITAEQMMDAYASVGMPLGYHHWSYGKHFLS
TEKSYSRGQMGLAYEIVINSDPCIAYLMEENTICMQALVVAHACYGHNSFFKGNYLFRTWTDASSIIDYLVFAKQYIMQC
EERHGIDAVEDLLDSCHALMNYGVDRYKRPYPISAEEERRRQKDREEHLQKQINDLWRTIPKGADKYSDKDNARFPAEPQ
ENILYFIEKHAPLLEPWQREIVRIVRKIAQYFYPQRQTQVMNEGWATFWHYTLMNDLYDEGLVTDGFMMEFLTSHTSVVF
QPGFDSPYYNGINPYALGFAMYRDIRRMCEEPTEEDRRWFPEIAGSDWLSTIKFAMSSFKDESFILQYLSPKVIRDLKLF
SILDDDQKDDLLVPAIHDEGGYRIIRETLAAQYNLGNREPNVQIYSIDRRGDRSLTLRHQQHDRKPLGDSTEEVLKHLHR
LWGFDIHLETLQGDQIMKTHHVPPRSEHSEGDYGRLDLAVIHL

Sequences:

>Translated_523_residues
MTAKTAKEQKRQPISTGSEWTFELIQTYDREIARIAARYALDTYPNQIEVITAEQMMDAYASVGMPLGYHHWSYGKHFLS
TEKSYSRGQMGLAYEIVINSDPCIAYLMEENTICMQALVVAHACYGHNSFFKGNYLFRTWTDASSIIDYLVFAKQYIMQC
EERHGIDAVEDLLDSCHALMNYGVDRYKRPYPISAEEERRRQKDREEHLQKQINDLWRTIPKGADKYSDKDNARFPAEPQ
ENILYFIEKHAPLLEPWQREIVRIVRKIAQYFYPQRQTQVMNEGWATFWHYTLMNDLYDEGLVTDGFMMEFLTSHTSVVF
QPGFDSPYYNGINPYALGFAMYRDIRRMCEEPTEEDRRWFPEIAGSDWLSTIKFAMSSFKDESFILQYLSPKVIRDLKLF
SILDDDQKDDLLVPAIHDEGGYRIIRETLAAQYNLGNREPNVQIYSIDRRGDRSLTLRHQQHDRKPLGDSTEEVLKHLHR
LWGFDIHLETLQGDQIMKTHHVPPRSEHSEGDYGRLDLAVIHL
>Mature_522_residues
TAKTAKEQKRQPISTGSEWTFELIQTYDREIARIAARYALDTYPNQIEVITAEQMMDAYASVGMPLGYHHWSYGKHFLST
EKSYSRGQMGLAYEIVINSDPCIAYLMEENTICMQALVVAHACYGHNSFFKGNYLFRTWTDASSIIDYLVFAKQYIMQCE
ERHGIDAVEDLLDSCHALMNYGVDRYKRPYPISAEEERRRQKDREEHLQKQINDLWRTIPKGADKYSDKDNARFPAEPQE
NILYFIEKHAPLLEPWQREIVRIVRKIAQYFYPQRQTQVMNEGWATFWHYTLMNDLYDEGLVTDGFMMEFLTSHTSVVFQ
PGFDSPYYNGINPYALGFAMYRDIRRMCEEPTEEDRRWFPEIAGSDWLSTIKFAMSSFKDESFILQYLSPKVIRDLKLFS
ILDDDQKDDLLVPAIHDEGGYRIIRETLAAQYNLGNREPNVQIYSIDRRGDRSLTLRHQQHDRKPLGDSTEEVLKHLHRL
WGFDIHLETLQGDQIMKTHHVPPRSEHSEGDYGRLDLAVIHL

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=493, Percent_Identity=67.5456389452333, Blast_Score=727, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 61361; Mature: 61230

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAKTAKEQKRQPISTGSEWTFELIQTYDREIARIAARYALDTYPNQIEVITAEQMMDAY
CCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHH
ASVGMPLGYHHWSYGKHFLSTEKSYSRGQMGLAYEIVINSDPCIAYLMEENTICMQALVV
HHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHH
AHACYGHNSFFKGNYLFRTWTDASSIIDYLVFAKQYIMQCEERHGIDAVEDLLDSCHALM
HHHHHCCCCEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
NYGVDRYKRPYPISAEEERRRQKDREEHLQKQINDLWRTIPKGADKYSDKDNARFPAEPQ
HCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH
ENILYFIEKHAPLLEPWQREIVRIVRKIAQYFYPQRQTQVMNEGWATFWHYTLMNDLYDE
HHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHC
GLVTDGFMMEFLTSHTSVVFQPGFDSPYYNGINPYALGFAMYRDIRRMCEEPTEEDRRWF
CCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH
PEIAGSDWLSTIKFAMSSFKDESFILQYLSPKVIRDLKLFSILDDDQKDDLLVPAIHDEG
HHHCCCHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEEEEEEECCC
GYRIIRETLAAQYNLGNREPNVQIYSIDRRGDRSLTLRHQQHDRKPLGDSTEEVLKHLHR
CHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEHHHCCCCCCCCCHHHHHHHHHH
LWGFDIHLETLQGDQIMKTHHVPPRSEHSEGDYGRLDLAVIHL
HHCCCEEEEECCCCHHHHHCCCCCCCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure 
TAKTAKEQKRQPISTGSEWTFELIQTYDREIARIAARYALDTYPNQIEVITAEQMMDAY
CCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHH
ASVGMPLGYHHWSYGKHFLSTEKSYSRGQMGLAYEIVINSDPCIAYLMEENTICMQALVV
HHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHH
AHACYGHNSFFKGNYLFRTWTDASSIIDYLVFAKQYIMQCEERHGIDAVEDLLDSCHALM
HHHHHCCCCEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
NYGVDRYKRPYPISAEEERRRQKDREEHLQKQINDLWRTIPKGADKYSDKDNARFPAEPQ
HCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH
ENILYFIEKHAPLLEPWQREIVRIVRKIAQYFYPQRQTQVMNEGWATFWHYTLMNDLYDE
HHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHC
GLVTDGFMMEFLTSHTSVVFQPGFDSPYYNGINPYALGFAMYRDIRRMCEEPTEEDRRWF
CCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH
PEIAGSDWLSTIKFAMSSFKDESFILQYLSPKVIRDLKLFSILDDDQKDDLLVPAIHDEG
HHHCCCHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEEEEEEECCC
GYRIIRETLAAQYNLGNREPNVQIYSIDRRGDRSLTLRHQQHDRKPLGDSTEEVLKHLHR
CHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEHHHCCCCCCCCCHHHHHHHHHH
LWGFDIHLETLQGDQIMKTHHVPPRSEHSEGDYGRLDLAVIHL
HHCCCEEEEECCCCHHHHHCCCCCCCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689 [H]