| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461325
Identifier: 77461325
GI number: 77461325
Start: 5738266
End: 5739234
Strand: Direct
Name: 77461325
Synonym: Pfl01_5104
Alternate gene names: NA
Gene position: 5738266-5739234 (Clockwise)
Preceding gene: 77461324
Following gene: 77461326
Centisome position: 89.13
GC content: 61.61
Gene sequence:
>969_bases ATGTCGCTGCCCGCTCTGCTCGAACAACGTCTGCGCCTGCCCGTAGTGGCAGCACCGATGTTTCTGATCTCCAATCCTGA ACTGGTGCTGGCGTGCTGCCGTAACGGCGTGGTCGGCAGCTTCCCGGCGCTGAACCAACGCGAAAGCAGCGGATTCAAGG CATGGCTGGAGCAGATCGAAGCGGGACTGGCGACACTGGAGAACCCGGCGCCTTATGCCGTGAACCTGATTGTTCACAAG AGCAATCCACGTCTGGAGGCGGACCTGAACATCTGCGTCGAACACAAAGTCCCCATCGTCATCACCAGTCTTGGTGCCGT GAAGGAAGTGGTAGACGCCGTGCACAGCTACGGCGGCCTGGTCTTCCACGACGTGACGACCCGCCGCCATGCCGAGAAAG CCGCCGAGGCCGGTGTCGATGGCTTGATCGCCGTCGCGGCCGGTGCCGGTGGGCACGCCGGGACCTGGAGCCCGTTCTCG CTGATCGCCGAGATCCGCGAGTGCTTCGACAAAACCCTGTTGCTTGCAGGATGTTTGAACCATGGGCATGAGATTCTCGC CGCACAACTGCTCGGCGCGGATCTGGCCTACTTCGGCACGCGATTTATCGGCACCACTGAAAGTCATGCGCCTGACGCCT ACAAGCAGATGCTGCTGACTGCCAAAGCCGCCGACATCATTCATACTCCTGCCGTGTCCGGTGTTCCGGCCAGTTTTATG CGTCAAAGCCTGGAGGCCGCCGGTTTCGACATGGCAGCCCTGCAGGGCAAGGGTGAAGTGAACTTCGGCGACAAGCTCAA GCCGATCAACGACGAAGCCAAGGCCTGGAAAACCGTGTGGTCGGCAGGTCAGGGCGTCGGGCAGATCGACGATCTGCCAA GCGTGGATCAACTGGTGGCGCGTCTCGATGCCGAATACCGCCAGGCCCTGGAGCACGCAGCGCAACTGCCGAAACGCTGG CCACGTTGA
Upstream 100 bases:
>100_bases GTTCAATGAAGTGCCGGTTCTGCTATTGCTGGCTATCGTAATTCTGGTCGTGGTCAAGCCGTTCTAACTTCAACAAATAC AACTTTCCGGGGTACTTCCG
Downstream 100 bases:
>100_bases ATGAAACCAGGCCAGTCGCTGTTTGACTGGCCTTAGACTCACTTTATCTCGCGACAAGGATGCCTCGGCCATGAGCGAAC CCCGTTACAAGATCGTTTTC
Product: 2-nitropropane dioxygenase
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MSLPALLEQRLRLPVVAAPMFLISNPELVLACCRNGVVGSFPALNQRESSGFKAWLEQIEAGLATLENPAPYAVNLIVHK SNPRLEADLNICVEHKVPIVITSLGAVKEVVDAVHSYGGLVFHDVTTRRHAEKAAEAGVDGLIAVAAGAGGHAGTWSPFS LIAEIRECFDKTLLLAGCLNHGHEILAAQLLGADLAYFGTRFIGTTESHAPDAYKQMLLTAKAADIIHTPAVSGVPASFM RQSLEAAGFDMAALQGKGEVNFGDKLKPINDEAKAWKTVWSAGQGVGQIDDLPSVDQLVARLDAEYRQALEHAAQLPKRW PR
Sequences:
>Translated_322_residues MSLPALLEQRLRLPVVAAPMFLISNPELVLACCRNGVVGSFPALNQRESSGFKAWLEQIEAGLATLENPAPYAVNLIVHK SNPRLEADLNICVEHKVPIVITSLGAVKEVVDAVHSYGGLVFHDVTTRRHAEKAAEAGVDGLIAVAAGAGGHAGTWSPFS LIAEIRECFDKTLLLAGCLNHGHEILAAQLLGADLAYFGTRFIGTTESHAPDAYKQMLLTAKAADIIHTPAVSGVPASFM RQSLEAAGFDMAALQGKGEVNFGDKLKPINDEAKAWKTVWSAGQGVGQIDDLPSVDQLVARLDAEYRQALEHAAQLPKRW PR >Mature_321_residues SLPALLEQRLRLPVVAAPMFLISNPELVLACCRNGVVGSFPALNQRESSGFKAWLEQIEAGLATLENPAPYAVNLIVHKS NPRLEADLNICVEHKVPIVITSLGAVKEVVDAVHSYGGLVFHDVTTRRHAEKAAEAGVDGLIAVAAGAGGHAGTWSPFSL IAEIRECFDKTLLLAGCLNHGHEILAAQLLGADLAYFGTRFIGTTESHAPDAYKQMLLTAKAADIIHTPAVSGVPASFMR QSLEAAGFDMAALQGKGEVNFGDKLKPINDEAKAWKTVWSAGQGVGQIDDLPSVDQLVARLDAEYRQALEHAAQLPKRWP R
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 34477; Mature: 34346
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPALLEQRLRLPVVAAPMFLISNPELVLACCRNGVVGSFPALNQRESSGFKAWLEQIE CCCHHHHHHHHCCCHHHCCHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH AGLATLENPAPYAVNLIVHKSNPRLEADLNICVEHKVPIVITSLGAVKEVVDAVHSYGGL HHHHHCCCCCCEEEEEEEECCCCCEECCCEEEEECCCCEEEECHHHHHHHHHHHHHHCCE VFHDVTTRRHAEKAAEAGVDGLIAVAAGAGGHAGTWSPFSLIAEIRECFDKTLLLAGCLN EEEHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH HGHEILAAQLLGADLAYFGTRFIGTTESHAPDAYKQMLLTAKAADIIHTPAVSGVPASFM HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHH RQSLEAAGFDMAALQGKGEVNFGDKLKPINDEAKAWKTVWSAGQGVGQIDDLPSVDQLVA HHHHHHCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH RLDAEYRQALEHAAQLPKRWPR HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SLPALLEQRLRLPVVAAPMFLISNPELVLACCRNGVVGSFPALNQRESSGFKAWLEQIE CCHHHHHHHHCCCHHHCCHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH AGLATLENPAPYAVNLIVHKSNPRLEADLNICVEHKVPIVITSLGAVKEVVDAVHSYGGL HHHHHCCCCCCEEEEEEEECCCCCEECCCEEEEECCCCEEEECHHHHHHHHHHHHHHCCE VFHDVTTRRHAEKAAEAGVDGLIAVAAGAGGHAGTWSPFSLIAEIRECFDKTLLLAGCLN EEEHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH HGHEILAAQLLGADLAYFGTRFIGTTESHAPDAYKQMLLTAKAADIIHTPAVSGVPASFM HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHH RQSLEAAGFDMAALQGKGEVNFGDKLKPINDEAKAWKTVWSAGQGVGQIDDLPSVDQLVA HHHHHHCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH RLDAEYRQALEHAAQLPKRWPR HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA