| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is erpA [H]
Identifier: 77461322
GI number: 77461322
Start: 5736115
End: 5736465
Strand: Reverse
Name: erpA [H]
Synonym: Pfl01_5101
Alternate gene names: 77461322
Gene position: 5736465-5736115 (Counterclockwise)
Preceding gene: 77461323
Following gene: 77461319
Centisome position: 89.1
GC content: 56.7
Gene sequence:
>351_bases ATGAGCGTCGAATCCTTCACCCCCACGGCTTTGCAATTCACTCAAGGTGCCGCGCACAAGGTGAAGAGCCTGGTCGATGA AGAGGGGAATGATCGCTTGAAGCTGCGCGTATTCGTTACGGGCGGCGGTTGTTCAGGGTTTCAGTACGGCTTCACCTTCG ATGAAGATGTGGCCGAGGACGACACCATCGTCGAGCGCGAAGGCGTCAGTCTGGTGGTCGATCCGATGAGCTTCCAGTAC CTGGCAGGTGCCGAGGTGGATTATCAGGAAGGTCTGGAAGGTTCGCGTTTCGTGATCAAGAACCCGAATGCCACCACCAC TTGTGGTTGCGGCTCCTCGTTCTCGATCTGA
Upstream 100 bases:
>100_bases TTATTGATATACCGTAACAATAGTTGACCGATTTTCTAGGACAAGCGGATAATGCGCGTCATCACGCATTATGGCGGCGT AACGCCGGGAGATAGTCAGC
Downstream 100 bases:
>100_bases TCGCGCTTCACCGTACACAACAAAACGCCGCAGAACCTCACGGTTCTGCGGCGTTTTGTTATCTGCGATTTGTCAGTTGG GGTAGATGGCGCCGAGTACG
Product: iron-sulfur cluster insertion protein ErpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MSVESFTPTALQFTQGAAHKVKSLVDEEGNDRLKLRVFVTGGGCSGFQYGFTFDEDVAEDDTIVEREGVSLVVDPMSFQY LAGAEVDYQEGLEGSRFVIKNPNATTTCGCGSSFSI
Sequences:
>Translated_116_residues MSVESFTPTALQFTQGAAHKVKSLVDEEGNDRLKLRVFVTGGGCSGFQYGFTFDEDVAEDDTIVEREGVSLVVDPMSFQY LAGAEVDYQEGLEGSRFVIKNPNATTTCGCGSSFSI >Mature_115_residues SVESFTPTALQFTQGAAHKVKSLVDEEGNDRLKLRVFVTGGGCSGFQYGFTFDEDVAEDDTIVEREGVSLVVDPMSFQYL AGAEVDYQEGLEGSRFVIKNPNATTTCGCGSSFSI
Specific function: Required for insertion of 4Fe-4S clusters for at least ispG [H]
COG id: COG0316
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hesB/iscA family [H]
Homologues:
Organism=Homo sapiens, GI160420328, Length=83, Percent_Identity=49.3975903614458, Blast_Score=81, Evalue=2e-16, Organism=Homo sapiens, GI52426768, Length=118, Percent_Identity=33.8983050847458, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1786351, Length=106, Percent_Identity=69.811320754717, Blast_Score=162, Evalue=6e-42, Organism=Escherichia coli, GI1788877, Length=109, Percent_Identity=36.697247706422, Blast_Score=67, Evalue=4e-13, Organism=Escherichia coli, GI1787974, Length=114, Percent_Identity=32.4561403508772, Blast_Score=59, Evalue=6e-11, Organism=Caenorhabditis elegans, GI71998452, Length=113, Percent_Identity=38.9380530973451, Blast_Score=80, Evalue=2e-16, Organism=Caenorhabditis elegans, GI25146411, Length=110, Percent_Identity=36.3636363636364, Blast_Score=77, Evalue=1e-15, Organism=Caenorhabditis elegans, GI193209025, Length=107, Percent_Identity=36.4485981308411, Blast_Score=76, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6323001, Length=82, Percent_Identity=37.8048780487805, Blast_Score=70, Evalue=8e-14, Organism=Drosophila melanogaster, GI24649697, Length=83, Percent_Identity=48.1927710843374, Blast_Score=76, Evalue=4e-15, Organism=Drosophila melanogaster, GI24642263, Length=110, Percent_Identity=35.4545454545455, Blast_Score=69, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000361 - InterPro: IPR016092 - InterPro: IPR017870 - InterPro: IPR023063 [H]
Pfam domain/function: PF01521 Fe-S_biosyn [H]
EC number: NA
Molecular weight: Translated: 12506; Mature: 12375
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: PS01152 HESB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVESFTPTALQFTQGAAHKVKSLVDEEGNDRLKLRVFVTGGGCSGFQYGFTFDEDVAED CCCCCCCCCEEEECCCHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCC DTIVEREGVSLVVDPMSFQYLAGAEVDYQEGLEGSRFVIKNPNATTTCGCGSSFSI CCEEECCCCEEEECCCCEEEECCCCCCHHHCCCCCEEEEECCCCCEEECCCCCCCC >Mature Secondary Structure SVESFTPTALQFTQGAAHKVKSLVDEEGNDRLKLRVFVTGGGCSGFQYGFTFDEDVAED CCCCCCCCEEEECCCHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCC DTIVEREGVSLVVDPMSFQYLAGAEVDYQEGLEGSRFVIKNPNATTTCGCGSSFSI CCEEECCCCEEEECCCCEEEECCCCCCHHHCCCCCEEEEECCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA