| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is pgpA [H]
Identifier: 77461234
GI number: 77461234
Start: 5649584
End: 5650087
Strand: Reverse
Name: pgpA [H]
Synonym: Pfl01_5013
Alternate gene names: 77461234
Gene position: 5650087-5649584 (Counterclockwise)
Preceding gene: 77461235
Following gene: 77461233
Centisome position: 87.76
GC content: 62.5
Gene sequence:
>504_bases GTGACAGATCACCCGAAACAGGTTCCGGCCGAATTCGTTCCGCCGTCGGTCTGGCGCAATCCTTGGCATTTCCTCGCGTT CGGTTTCGGCTCGGGCACCTTGCCCAAGGCGCCGGGCACTTGGGGCTCGTTAGTTGCACTACCCTTTATTCCGTTGTGGC AGATGCTGCCGGACTGGGGGTACTGGCTGATGCTCGGGATCACCATGCTGTTCGGCTTCTGGCTGTGCGGCAAAGTGGCC GACGATCTGCGGGTGCACGACCACGAAGGCATCGTCTGGGACGAAATGGTCGGGATGTGGATCACCCTGTGGCTGGTGCC GGAAGGCTGGTACTGGTTGCTGGCCGGGTTCCTCGTGTTCCGCTTCTTCGACATTCTCAAGCCGTGGCCGATCCGCTGGA TCGACCGGCATGTTCACGGCGGCGTCGGCATCATGCTCGACGACGTGCTGGCCGGCGTGTTCGCGTGGCTGGCGATGCAG GGACTGGTGTGGGTTTTCGCCTGA
Upstream 100 bases:
>100_bases TCGGCCGCGTGACGCAAGGGCAGGGCGTGGTGCTGCTGGATCGCGACGGGCACGACATCACCCCGCAAATCCGGGGTTAT CAACATTTTCAGGAGTCACC
Downstream 100 bases:
>100_bases TTTCCAGGCGTGGATGAGGGGCACAGGGATGACTCGACGCTGGTTGGCGATAGTGGTTTTGACCTTGCTTGGCGCCGTGG CCCAGGCACAGGACGCACCG
Product: phosphatidylglycerophosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MTDHPKQVPAEFVPPSVWRNPWHFLAFGFGSGTLPKAPGTWGSLVALPFIPLWQMLPDWGYWLMLGITMLFGFWLCGKVA DDLRVHDHEGIVWDEMVGMWITLWLVPEGWYWLLAGFLVFRFFDILKPWPIRWIDRHVHGGVGIMLDDVLAGVFAWLAMQ GLVWVFA
Sequences:
>Translated_167_residues MTDHPKQVPAEFVPPSVWRNPWHFLAFGFGSGTLPKAPGTWGSLVALPFIPLWQMLPDWGYWLMLGITMLFGFWLCGKVA DDLRVHDHEGIVWDEMVGMWITLWLVPEGWYWLLAGFLVFRFFDILKPWPIRWIDRHVHGGVGIMLDDVLAGVFAWLAMQ GLVWVFA >Mature_166_residues TDHPKQVPAEFVPPSVWRNPWHFLAFGFGSGTLPKAPGTWGSLVALPFIPLWQMLPDWGYWLMLGITMLFGFWLCGKVAD DLRVHDHEGIVWDEMVGMWITLWLVPEGWYWLLAGFLVFRFFDILKPWPIRWIDRHVHGGVGIMLDDVLAGVFAWLAMQG LVWVFA
Specific function: One of the three phospholipid phosphatases, specifically hydrolyzes phosphatidylglycerophosphate [H]
COG id: COG1267
COG function: function code I; Phosphatidylglycerophosphatase A and related proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786620, Length=138, Percent_Identity=55.0724637681159, Blast_Score=149, Evalue=1e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007686 [H]
Pfam domain/function: PF04608 PgpA [H]
EC number: =3.1.3.27 [H]
Molecular weight: Translated: 19307; Mature: 19176
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDHPKQVPAEFVPPSVWRNPWHFLAFGFGSGTLPKAPGTWGSLVALPFIPLWQMLPDWG CCCCCCCCCHHCCCCHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCH YWLMLGITMLFGFWLCGKVADDLRVHDHEGIVWDEMVGMWITLWLVPEGWYWLLAGFLVF HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH RFFDILKPWPIRWIDRHVHGGVGIMLDDVLAGVFAWLAMQGLVWVFA HHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TDHPKQVPAEFVPPSVWRNPWHFLAFGFGSGTLPKAPGTWGSLVALPFIPLWQMLPDWG CCCCCCCCHHCCCCHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCH YWLMLGITMLFGFWLCGKVADDLRVHDHEGIVWDEMVGMWITLWLVPEGWYWLLAGFLVF HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH RFFDILKPWPIRWIDRHVHGGVGIMLDDVLAGVFAWLAMQGLVWVFA HHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2846510; 9278503 [H]