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The map label for this gene is yabI [H]

Identifier: 77461197

GI number: 77461197

Start: 5603932

End: 5605248

Strand: Direct

Name: yabI [H]

Synonym: Pfl01_4976

Alternate gene names: 77461197

Gene position: 5603932-5605248 (Clockwise)

Preceding gene: 77461196

Following gene: 77461198

Centisome position: 87.04

GC content: 64.92

Gene sequence:

>1317_bases
ATGGGCCCATGGCTCGATAGCGTGACCGGGTGGCTGGCTGCCAATCCGCAGTGGCTGGCCGCTGCAGTGTTTGTCGTGGC
CTGCGTGGAGTGCCTGGCGATTGCCGGGTTGATCGTGCCCGGCACGGTGCTGCTGTTTGCCGTGGCGGTGCTGGCCGGCA
GCGGCGCACTGTCGTTGAGCGAAACCCTGTTGCTGGGTTTCCTCGGCGGGATTCTCGGCGATGTGATTTCGTATTTCCTC
GGTCGCCACTTCCACCAGAACATCCGGCGTCTGCCAGGCCTGCGCCATCACCCGGAATGGATGGCCGGCGCGGAAACCTA
TTTCCAGCGCTATGGCATTGCCAGCCTGCTGGTCGGACGCTTCATCGGGCCGTTGCGGCCGATGTTGCCGATGGTCGCCG
GGATGTGCGACATGCCCTTCCCGCGCTTTGCGGCCGTAAGTCTGTTGGCCGCCGCCGGCTGGAGCCTCGCGTACCTGCTG
CCGGGCTGGGCCACCGGAGCGGCGATTCGCCTGCCACTGCCGGAAGGCTTCTGGCTGCAGGCCGGAATCGTTGCCGGCAG
CATCGCGGTGATGGTCGGCCTGAGTGCCAACAGCAGCTTGCGTCGTCATCGCCGGGCGACGCTCTGGATCAGCAGCATGA
GCCTGTTGATCCTGATCGGCCTGTTCATCGGCTACCCGTACCTGACCGCCCTCGATCAGGGCGTCATGACCCTGGTGCAG
GAACACCGCCGCCCGGCGCTGGATGAAGTCGCGGTGGTTTTCACCCTGATCGGTGAATTCCGCAACATGCTGCTGTTCAG
CGCCCTGCTGACTGCGTTGCTGTTGCTGTGCCGACAGTGGCGCCACGCGATCTTCGTGGGCGGCACCCTGCTCGTCACGG
CCCTGGCCAACACCGGCACCAAAATGTTCTTCGCCCGGGTGCGCCCGGAAGTACTGACTGATCCGCTTACCAGCTACAGC
ATGCCCAGTGGTCACGCTTCGGGGTCGTTCGCGCTGTTCCTGGCGCTCGCCGTGCTGGCCGGACGCGGGCAGCCGCCGCG
CCTGCGCCTGACCTGGTTGTTGCTTGGCTGTATACCGGCGCTGGCAATTGCCCTGTCACGGGTATACCTGGGAGCGCACT
GGCCAACGGACGTCCTGGCCGGGGCCATGCTCGCTGCCTGTGTCTGCGCAGCGGGCCTGTGGCTCAGCCAACGCGATGCA
CCTCTTGGTGCCATGCCACAGAAAGTCTGGTGGCTGGTATTGCCGGCTCTGCTCGCTCTGTTTGGCTTCTTCGTATTGCG
ACACTTGCCACACACCTTGTTGCGATATGCCTACTAG

Upstream 100 bases:

>100_bases
GCTGCGCCGGGGTCAGGTCGAAGGTCGCGATTATTTTCTGCTGTGAATGCACACCCTTCGGCTCGCCGATCAGGGACATC
AATGAAATGGAGTGGTTTGT

Downstream 100 bases:

>100_bases
GCCCGCGCTCAACGCCTACAGGCGCATGCCCGGGCGGTGAGCGCCGGCAAACATTTGGCAAAGCAAAAGCTCATGAACAA
GTCCGTGCCTCATGCCACAT

Product: PA-phosphatase-like phosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MGPWLDSVTGWLAANPQWLAAAVFVVACVECLAIAGLIVPGTVLLFAVAVLAGSGALSLSETLLLGFLGGILGDVISYFL
GRHFHQNIRRLPGLRHHPEWMAGAETYFQRYGIASLLVGRFIGPLRPMLPMVAGMCDMPFPRFAAVSLLAAAGWSLAYLL
PGWATGAAIRLPLPEGFWLQAGIVAGSIAVMVGLSANSSLRRHRRATLWISSMSLLILIGLFIGYPYLTALDQGVMTLVQ
EHRRPALDEVAVVFTLIGEFRNMLLFSALLTALLLLCRQWRHAIFVGGTLLVTALANTGTKMFFARVRPEVLTDPLTSYS
MPSGHASGSFALFLALAVLAGRGQPPRLRLTWLLLGCIPALAIALSRVYLGAHWPTDVLAGAMLAACVCAAGLWLSQRDA
PLGAMPQKVWWLVLPALLALFGFFVLRHLPHTLLRYAY

Sequences:

>Translated_438_residues
MGPWLDSVTGWLAANPQWLAAAVFVVACVECLAIAGLIVPGTVLLFAVAVLAGSGALSLSETLLLGFLGGILGDVISYFL
GRHFHQNIRRLPGLRHHPEWMAGAETYFQRYGIASLLVGRFIGPLRPMLPMVAGMCDMPFPRFAAVSLLAAAGWSLAYLL
PGWATGAAIRLPLPEGFWLQAGIVAGSIAVMVGLSANSSLRRHRRATLWISSMSLLILIGLFIGYPYLTALDQGVMTLVQ
EHRRPALDEVAVVFTLIGEFRNMLLFSALLTALLLLCRQWRHAIFVGGTLLVTALANTGTKMFFARVRPEVLTDPLTSYS
MPSGHASGSFALFLALAVLAGRGQPPRLRLTWLLLGCIPALAIALSRVYLGAHWPTDVLAGAMLAACVCAAGLWLSQRDA
PLGAMPQKVWWLVLPALLALFGFFVLRHLPHTLLRYAY
>Mature_437_residues
GPWLDSVTGWLAANPQWLAAAVFVVACVECLAIAGLIVPGTVLLFAVAVLAGSGALSLSETLLLGFLGGILGDVISYFLG
RHFHQNIRRLPGLRHHPEWMAGAETYFQRYGIASLLVGRFIGPLRPMLPMVAGMCDMPFPRFAAVSLLAAAGWSLAYLLP
GWATGAAIRLPLPEGFWLQAGIVAGSIAVMVGLSANSSLRRHRRATLWISSMSLLILIGLFIGYPYLTALDQGVMTLVQE
HRRPALDEVAVVFTLIGEFRNMLLFSALLTALLLLCRQWRHAIFVGGTLLVTALANTGTKMFFARVRPEVLTDPLTSYSM
PSGHASGSFALFLALAVLAGRGQPPRLRLTWLLLGCIPALAIALSRVYLGAHWPTDVLAGAMLAACVCAAGLWLSQRDAP
LGAMPQKVWWLVLPALLALFGFFVLRHLPHTLLRYAY

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1786252, Length=151, Percent_Identity=41.0596026490066, Blast_Score=115, Evalue=7e-27,
Organism=Escherichia coli, GI1788656, Length=153, Percent_Identity=25.4901960784314, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1789481, Length=160, Percent_Identity=30.625, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 47327; Mature: 47196

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GPWLDSVTGWLAANPQWLAAAVFVVACVECLAIAGLIVPGTVLLFAVAVLAGSGALSLS
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ETLLLGFLGGILGDVISYFLGRHFHQNIRRLPGLRHHPEWMAGAETYFQRYGIASLLVGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FIGPLRPMLPMVAGMCDMPFPRFAAVSLLAAAGWSLAYLLPGWATGAAIRLPLPEGFWLQ
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCEEEECCCCCCHHH
AGIVAGSIAVMVGLSANSSLRRHRRATLWISSMSLLILIGLFIGYPYLTALDQGVMTLVQ
HHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EHRRPALDEVAVVFTLIGEFRNMLLFSALLTALLLLCRQWRHAIFVGGTLLVTALANTGT
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCH
KMFFARVRPEVLTDPLTSYSMPSGHASGSFALFLALAVLAGRGQPPRLRLTWLLLGCIPA
HHHHHHHCHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LAIALSRVYLGAHWPTDVLAGAMLAACVCAAGLWLSQRDAPLGAMPQKVWWLVLPALLAL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
FGFFVLRHLPHTLLRYAY
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1630901; 9278503 [H]