| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461176
Identifier: 77461176
GI number: 77461176
Start: 5582851
End: 5583630
Strand: Reverse
Name: 77461176
Synonym: Pfl01_4955
Alternate gene names: NA
Gene position: 5583630-5582851 (Counterclockwise)
Preceding gene: 77461177
Following gene: 77461170
Centisome position: 86.72
GC content: 63.85
Gene sequence:
>780_bases ATGCCTTTTCGTTATTTCATTAAACAACTTCTATTGCCGCCAGGCGTTCTCTTGTTGCTGCTGCTCGTTGCCTGGTGGCT GCGACGTTCGCGGCCGCGACTGGCCGGGCTGTGCTTTGCCCTGGGTTTTGGCGGCTTCTGGCTGATGAGTCTGCCGGTGG TCGTGCAATGGGGTGCCAAGGCCCTGGAGCGCGAGCCGCCGCTGGCGCGGGATTCATGGGCAAGTCTGGCGCAGCGCGCC GATGCGATTGTGGTGCTGGGCTCCGGTCGCGAGCGCGGCGATCTGGCCTGGGGCGAGGATCAACCGACCGGTGTCGGGCT GGAGCGCCAGCGTTATGCGGCGCGACTGGCCAAGGCATCGGGGTTGCCGATTCTGACCAGTGGTGGCCTGCATTACGGTA CGCCGCCGACCGAAGCCAAACTGATGGCCGATTCGTTGCGCGATGACTTCGGTGTGACGGTGCGCTGGCAGGAAGGGGAG AGCCGCACCACGTGGGAGAACGCCGAATTCAGCGCCAAAGTGCTATTGCCGGAAGGTGTGAAGCGGATCGTGCTGGTGAC CCAGGCCTGGCACATGCCGCGAGCGGTGTGGAGCTATCAACAGGCCGGATTCGAAGTGGTGCCGGCACCGGTCGGGTTCC TCGGCACGGACAATGCGCGACCGTTTGGCGGCTGGCTGCCGGAGTTCAAGTCGATCTGGCAAAGCGGGCAGTTGATGAAC GAGGCGGTGGGGCAGATCGGCTATTCACTGTTCTACCGAGGGGGTGACAGCGCCGATTGA
Upstream 100 bases:
>100_bases TGGCAGGTCAAAAAGCGGATCTTTTTCAACGGGATCCGACCCTACTGGTTGTCGCGCTGTATCAACCCACTTAGGCTTCG GGCATCTCTGGAGATGCTCG
Downstream 100 bases:
>100_bases TCACTCCCGCGCAGAACGCGGGAGTGAGCGGGTTTTCAGAGCGTCTTGGACATCCGGTTGGTCATCAGCGCCCAGCCGAA CAGCACCACACACAGGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MPFRYFIKQLLLPPGVLLLLLLVAWWLRRSRPRLAGLCFALGFGGFWLMSLPVVVQWGAKALEREPPLARDSWASLAQRA DAIVVLGSGRERGDLAWGEDQPTGVGLERQRYAARLAKASGLPILTSGGLHYGTPPTEAKLMADSLRDDFGVTVRWQEGE SRTTWENAEFSAKVLLPEGVKRIVLVTQAWHMPRAVWSYQQAGFEVVPAPVGFLGTDNARPFGGWLPEFKSIWQSGQLMN EAVGQIGYSLFYRGGDSAD
Sequences:
>Translated_259_residues MPFRYFIKQLLLPPGVLLLLLLVAWWLRRSRPRLAGLCFALGFGGFWLMSLPVVVQWGAKALEREPPLARDSWASLAQRA DAIVVLGSGRERGDLAWGEDQPTGVGLERQRYAARLAKASGLPILTSGGLHYGTPPTEAKLMADSLRDDFGVTVRWQEGE SRTTWENAEFSAKVLLPEGVKRIVLVTQAWHMPRAVWSYQQAGFEVVPAPVGFLGTDNARPFGGWLPEFKSIWQSGQLMN EAVGQIGYSLFYRGGDSAD >Mature_258_residues PFRYFIKQLLLPPGVLLLLLLVAWWLRRSRPRLAGLCFALGFGGFWLMSLPVVVQWGAKALEREPPLARDSWASLAQRAD AIVVLGSGRERGDLAWGEDQPTGVGLERQRYAARLAKASGLPILTSGGLHYGTPPTEAKLMADSLRDDFGVTVRWQEGES RTTWENAEFSAKVLLPEGVKRIVLVTQAWHMPRAVWSYQQAGFEVVPAPVGFLGTDNARPFGGWLPEFKSIWQSGQLMNE AVGQIGYSLFYRGGDSAD
Specific function: Unknown
COG id: COG1434
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003848 - InterPro: IPR014729 [H]
Pfam domain/function: PF02698 DUF218 [H]
EC number: NA
Molecular weight: Translated: 28670; Mature: 28539
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFRYFIKQLLLPPGVLLLLLLVAWWLRRSRPRLAGLCFALGFGGFWLMSLPVVVQWGAK CCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHH ALEREPPLARDSWASLAQRADAIVVLGSGRERGDLAWGEDQPTGVGLERQRYAARLAKAS HHHCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC GLPILTSGGLHYGTPPTEAKLMADSLRDDFGVTVRWQEGESRTTWENAEFSAKVLLPEGV CCCEEECCCEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCC KRIVLVTQAWHMPRAVWSYQQAGFEVVPAPVGFLGTDNARPFGGWLPEFKSIWQSGQLMN CEEEEEHHHHHCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHH EAVGQIGYSLFYRGGDSAD HHHHHHHHHEEECCCCCCC >Mature Secondary Structure PFRYFIKQLLLPPGVLLLLLLVAWWLRRSRPRLAGLCFALGFGGFWLMSLPVVVQWGAK CHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHH ALEREPPLARDSWASLAQRADAIVVLGSGRERGDLAWGEDQPTGVGLERQRYAARLAKAS HHHCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC GLPILTSGGLHYGTPPTEAKLMADSLRDDFGVTVRWQEGESRTTWENAEFSAKVLLPEGV CCCEEECCCEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCC KRIVLVTQAWHMPRAVWSYQQAGFEVVPAPVGFLGTDNARPFGGWLPEFKSIWQSGQLMN CEEEEEHHHHHCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHH EAVGQIGYSLFYRGGDSAD HHHHHHHHHEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]