| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is tauC [C]
Identifier: 77461151
GI number: 77461151
Start: 5554354
End: 5555157
Strand: Reverse
Name: tauC [C]
Synonym: Pfl01_4930
Alternate gene names: 77461151
Gene position: 5555157-5554354 (Counterclockwise)
Preceding gene: 77461152
Following gene: 77461150
Centisome position: 86.28
GC content: 62.19
Gene sequence:
>804_bases ATGTTCAAGCGCAATTCATGGCTGAGCCGCTGCATCACGCCGAAGACCGGGTTGCCGGTGCCGGTGGTGTGGAGCGCCAG CGGGCTGGCCTGGGTGTTGCTGGTCGGCCTGTGGGCCGGGTTGTCCTACGGCGGCATCGTGCCGGGAATGTTCCTGCCGA CGCCCGGCGCGGTGGTTGAAGCGGCGGTGCGTCTGAGCCGCGACGGCACTCTTGGCCAGCATGTCTGGGCCAGTGTCGAA GTGGTGATGGTCGGTTTCATCGTGTCGTCGCTGGTGGCGGTGCCGCTGGGTTTGTTGATGGGCAGTTTTCGCATCGTCCA GGCGTTCCTCGAACCGCTGGTCAATTTCATCCGCTACCTGCCGGTGACCTCGTTCGTGCCACTGTTCATCCTCTGGATTG GTATCGGTCTGGAGCAGCGGGTGTCGGTGATCATTTTCGGCGTGTTCTTCCAGCAACTGGTGATGATCGCGGACGTGTCC AAAGGCATTTCCAAGGACTTGATCAACGCCTCCTACACCCTCGGCTCGAACCGGCGTGACGCGGTGCTGCATGTGATCGC CCCGGCGTCGTTGCCCGGCGTGCTCGACACCTTGCGGGTGACTATGGGCTGGGCCTGGACCTATCTGGTGGTCGCCGAAC TGGTCGCCGCGTCCAGTGGCCTCGGTTACTTGAGCCTCAAGGCCATGCGCGGCTTTCAGGTCGATGTGATTTTTCTCGCC ATCGCGATCATCGGCCTGCTCGGCCTGGTCACCGATCAACTGTTCCGCTTCTTGCGTTTGAGGATTGCCGCATGGGCTCA GTAA
Upstream 100 bases:
>100_bases GCCAACGAAACCGCCAGCGAATTGCAGGGCAAGCCCTACAACGTCAGCAACGACGATCTGGTGGATAACCGTTTCGTCAG CCCGCTCTAGGAGACTACTC
Downstream 100 bases:
>100_bases CCGCTGCCAACCGTCGTTTCATCGAGCCGGTCGCCGCACCGGCCCACGCCGCGCCAAGGTTGCAGGTGGACAAGGTCAGC CTGCGCTACAGCAAACCCGG
Product: binding-protein dependent transport system inner membrane protein
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MFKRNSWLSRCITPKTGLPVPVVWSASGLAWVLLVGLWAGLSYGGIVPGMFLPTPGAVVEAAVRLSRDGTLGQHVWASVE VVMVGFIVSSLVAVPLGLLMGSFRIVQAFLEPLVNFIRYLPVTSFVPLFILWIGIGLEQRVSVIIFGVFFQQLVMIADVS KGISKDLINASYTLGSNRRDAVLHVIAPASLPGVLDTLRVTMGWAWTYLVVAELVAASSGLGYLSLKAMRGFQVDVIFLA IAIIGLLGLVTDQLFRFLRLRIAAWAQ
Sequences:
>Translated_267_residues MFKRNSWLSRCITPKTGLPVPVVWSASGLAWVLLVGLWAGLSYGGIVPGMFLPTPGAVVEAAVRLSRDGTLGQHVWASVE VVMVGFIVSSLVAVPLGLLMGSFRIVQAFLEPLVNFIRYLPVTSFVPLFILWIGIGLEQRVSVIIFGVFFQQLVMIADVS KGISKDLINASYTLGSNRRDAVLHVIAPASLPGVLDTLRVTMGWAWTYLVVAELVAASSGLGYLSLKAMRGFQVDVIFLA IAIIGLLGLVTDQLFRFLRLRIAAWAQ >Mature_267_residues MFKRNSWLSRCITPKTGLPVPVVWSASGLAWVLLVGLWAGLSYGGIVPGMFLPTPGAVVEAAVRLSRDGTLGQHVWASVE VVMVGFIVSSLVAVPLGLLMGSFRIVQAFLEPLVNFIRYLPVTSFVPLFILWIGIGLEQRVSVIIFGVFFQQLVMIADVS KGISKDLINASYTLGSNRRDAVLHVIAPASLPGVLDTLRVTMGWAWTYLVVAELVAASSGLGYLSLKAMRGFQVDVIFLA IAIIGLLGLVTDQLFRFLRLRIAAWAQ
Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=237, Percent_Identity=29.535864978903, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI87081802, Length=231, Percent_Identity=31.6017316017316, Blast_Score=102, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 28956; Mature: 28956
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKRNSWLSRCITPKTGLPVPVVWSASGLAWVLLVGLWAGLSYGGIVPGMFLPTPGAVVE CCCCHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH AAVRLSRDGTLGQHVWASVEVVMVGFIVSSLVAVPLGLLMGSFRIVQAFLEPLVNFIRYL HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVTSFVPLFILWIGIGLEQRVSVIIFGVFFQQLVMIADVSKGISKDLINASYTLGSNRRD CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCC AVLHVIAPASLPGVLDTLRVTMGWAWTYLVVAELVAASSGLGYLSLKAMRGFQVDVIFLA CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHCCCCHHHHHHH IAIIGLLGLVTDQLFRFLRLRIAAWAQ HHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFKRNSWLSRCITPKTGLPVPVVWSASGLAWVLLVGLWAGLSYGGIVPGMFLPTPGAVVE CCCCHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH AAVRLSRDGTLGQHVWASVEVVMVGFIVSSLVAVPLGLLMGSFRIVQAFLEPLVNFIRYL HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVTSFVPLFILWIGIGLEQRVSVIIFGVFFQQLVMIADVSKGISKDLINASYTLGSNRRD CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCC AVLHVIAPASLPGVLDTLRVTMGWAWTYLVVAELVAASSGLGYLSLKAMRGFQVDVIFLA CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHCCCCHHHHHHH IAIIGLLGLVTDQLFRFLRLRIAAWAQ HHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA