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The map label for this gene is yjiA [H]

Identifier: 77461102

GI number: 77461102

Start: 5504461

End: 5505432

Strand: Reverse

Name: yjiA [H]

Synonym: Pfl01_4881

Alternate gene names: 77461102

Gene position: 5505432-5504461 (Counterclockwise)

Preceding gene: 77461103

Following gene: 77461096

Centisome position: 85.51

GC content: 60.49

Gene sequence:

>972_bases
TTGTCTTCTCCCATCCCGGTCACGGTGCTCAGCGGTTTCCTCGGCGCCGGCAAGACCACCTTGCTGCGTCATTTATTGAA
AGCCGAGCACGGCCTGAAAATCGCCGTGATCGAAAACGAATTCAGCGACGCCAGCATCGACACCCAATTGCTGGGCGACG
AGCCGGTGCAAGTCATGACCCTGGCCAACGGCTGCGTCTGTTGCACCATCCACACCGACCTGACCAAGGCCTTGTACCTG
CTGCTCGAACGGCTGGACAGCGGCGAAATCGCCTTCGATCGGCTGGTCATCGAATGCACTGGTCTGGCCGACCCGGCCCC
GGTAGCACAGACCTTTTTCATCGACGAAGAACTGCGCGAGCGCTATTTGCTCGACGGCATCATCACCCTTGTGGATGCGG
CCCATGCCGAACTGCACCTGACCCAGACCATCGCCCAGGCGCAGATCGGTTTTGCCGACCGCCTGCTGGTGAGCAAGACC
GATCTGGTGGACGAGGCCGCGTTCACCGCGCTCAGCGAGCGACTGACCCGCATCAACCGCCGAGCACCGATTCGCGTGGT
CGAACACGGCAACATCGATCTGGCCGAATTGCTTGATGTGCGCGGTTTCAACCTGAATGCCGATCTTGGCGGCGGGGTGA
GTCTGCGGCCGGTGAGCAAGGCGCCGTCCATCGACCGGATTTCCAGTCTGGTGCTGCGTACCGACCAACCGCTGGATATC
GATCAGCTCAGCGAATTCATGAATGAATTGCTGGAAGAGCACGGCAAGCAATTGCTGCGCTACAAAGGCGTGTTGAACAT
CGCGGGCGAAGATCGGCGGCTGGTGTTTCAGGGCGTGCTGAAACTCTACGGCTTCGACTGGGACACCGAGTGGGCGGAAG
GCGAGGCGCGGGAAAGCGTGATCGTGTTTATCGCTGACGATTTGCCGGAAGAGAAAATCCGGGCGGGGTTTGCCAGGGTG
GCGGCGAACTGA

Upstream 100 bases:

>100_bases
AAGTGCTGCTGAATCGCTGATCGCGGTTCACCAGAGATAGGTGGGAGCAGGTCTTTCGGCCTGCTCCCATTTTTATTTGT
GCAATTGAAGGAGATCGAGT

Downstream 100 bases:

>100_bases
GTCCGCCGCGCTCTCAGTGCGTGGAGCCGCTGAGAATCGTCTGCTCCAGGTGATCCAGATGACGGTTCATCAGCGACGCC
GCCTCGACGGAGTCATCACG

Product: cobalamin synthesis protein/P47K

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MSSPIPVTVLSGFLGAGKTTLLRHLLKAEHGLKIAVIENEFSDASIDTQLLGDEPVQVMTLANGCVCCTIHTDLTKALYL
LLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRERYLLDGIITLVDAAHAELHLTQTIAQAQIGFADRLLVSKT
DLVDEAAFTALSERLTRINRRAPIRVVEHGNIDLAELLDVRGFNLNADLGGGVSLRPVSKAPSIDRISSLVLRTDQPLDI
DQLSEFMNELLEEHGKQLLRYKGVLNIAGEDRRLVFQGVLKLYGFDWDTEWAEGEARESVIVFIADDLPEEKIRAGFARV
AAN

Sequences:

>Translated_323_residues
MSSPIPVTVLSGFLGAGKTTLLRHLLKAEHGLKIAVIENEFSDASIDTQLLGDEPVQVMTLANGCVCCTIHTDLTKALYL
LLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRERYLLDGIITLVDAAHAELHLTQTIAQAQIGFADRLLVSKT
DLVDEAAFTALSERLTRINRRAPIRVVEHGNIDLAELLDVRGFNLNADLGGGVSLRPVSKAPSIDRISSLVLRTDQPLDI
DQLSEFMNELLEEHGKQLLRYKGVLNIAGEDRRLVFQGVLKLYGFDWDTEWAEGEARESVIVFIADDLPEEKIRAGFARV
AAN
>Mature_322_residues
SSPIPVTVLSGFLGAGKTTLLRHLLKAEHGLKIAVIENEFSDASIDTQLLGDEPVQVMTLANGCVCCTIHTDLTKALYLL
LERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRERYLLDGIITLVDAAHAELHLTQTIAQAQIGFADRLLVSKTD
LVDEAAFTALSERLTRINRRAPIRVVEHGNIDLAELLDVRGFNLNADLGGGVSLRPVSKAPSIDRISSLVLRTDQPLDID
QLSEFMNELLEEHGKQLLRYKGVLNIAGEDRRLVFQGVLKLYGFDWDTEWAEGEARESVIVFIADDLPEEKIRAGFARVA
AN

Specific function: Binds GTP. May function as GTP-dependent regulator [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI126722884, Length=344, Percent_Identity=30.8139534883721, Blast_Score=157, Evalue=1e-38,
Organism=Homo sapiens, GI33469141, Length=344, Percent_Identity=30.5232558139535, Blast_Score=156, Evalue=2e-38,
Organism=Homo sapiens, GI148727351, Length=344, Percent_Identity=30.8139534883721, Blast_Score=155, Evalue=5e-38,
Organism=Homo sapiens, GI146231952, Length=345, Percent_Identity=31.304347826087, Blast_Score=153, Evalue=2e-37,
Organism=Homo sapiens, GI223941779, Length=339, Percent_Identity=29.4985250737463, Blast_Score=142, Evalue=4e-34,
Organism=Homo sapiens, GI223941776, Length=330, Percent_Identity=30.3030303030303, Blast_Score=140, Evalue=1e-33,
Organism=Homo sapiens, GI119120938, Length=332, Percent_Identity=26.5060240963855, Blast_Score=116, Evalue=3e-26,
Organism=Escherichia coli, GI87082430, Length=319, Percent_Identity=54.858934169279, Blast_Score=320, Evalue=7e-89,
Organism=Escherichia coli, GI1788499, Length=208, Percent_Identity=29.8076923076923, Blast_Score=67, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6324356, Length=366, Percent_Identity=30.0546448087432, Blast_Score=125, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 35584; Mature: 35453

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPIPVTVLSGFLGAGKTTLLRHLLKAEHGLKIAVIENEFSDASIDTQLLGDEPVQVMT
CCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHCCCCCEEEEE
LANGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE
ECCCEEEEEECHHHHHHHHHHHHHCCCCCEEEHEEEEEECCCCCCCCHHHHHEECHHHHH
RYLLDGIITLVDAAHAELHLTQTIAQAQIGFADRLLVSKTDLVDEAAFTALSERLTRINR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RAPIRVVEHGNIDLAELLDVRGFNLNADLGGGVSLRPVSKAPSIDRISSLVLRTDQPLDI
CCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCCCH
DQLSEFMNELLEEHGKQLLRYKGVLNIAGEDRRLVFQGVLKLYGFDWDTEWAEGEARESV
HHHHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
IVFIADDLPEEKIRAGFARVAAN
EEEEECCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSPIPVTVLSGFLGAGKTTLLRHLLKAEHGLKIAVIENEFSDASIDTQLLGDEPVQVMT
CCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHCCCCCEEEEE
LANGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE
ECCCEEEEEECHHHHHHHHHHHHHCCCCCEEEHEEEEEECCCCCCCCHHHHHEECHHHHH
RYLLDGIITLVDAAHAELHLTQTIAQAQIGFADRLLVSKTDLVDEAAFTALSERLTRINR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RAPIRVVEHGNIDLAELLDVRGFNLNADLGGGVSLRPVSKAPSIDRISSLVLRTDQPLDI
CCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCCCH
DQLSEFMNELLEEHGKQLLRYKGVLNIAGEDRRLVFQGVLKLYGFDWDTEWAEGEARESV
HHHHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
IVFIADDLPEEKIRAGFARVAAN
EEEEECCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 1650347 [H]