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The map label for this gene is nanR [C]

Identifier: 77461101

GI number: 77461101

Start: 5503752

End: 5504447

Strand: Direct

Name: nanR [C]

Synonym: Pfl01_4880

Alternate gene names: 77461101

Gene position: 5503752-5504447 (Clockwise)

Preceding gene: 77461100

Following gene: 77461105

Centisome position: 85.48

GC content: 63.36

Gene sequence:

>696_bases
ATGAACAGTCTTGCCACGCCGTCGCACCCTCGCCCGACCTCGGCGGCCCTGCCCTTCTCCCGCCTGCAAGCGCCGGTGGA
CGATCTGTATCCGCGCCTGTTCGACGCAATCCTGGAGCAACGCATCGATGCCGCCAGCCGTTTCACCGAAGAAAGTCTCA
AGCAGATGTTCGGCGTCAGCCGCGCCGATGTGCGTCGGGTGCTGACCCAGCTGTCCCACGAACAGATCATCGTGCTGCGG
GCCAACCATCGACCACGAGTGGCCGCGCCGGACGCCGAGCAGACACGTCAGGCCCTGCACGCCCGGCGCTTGGCCGAGAA
CACGCTGGTGCGGCTGGCTTGTCAGCATGCGCAGGCTGAAGATTTGAAGCGCCTGCGAGCACTGATCGAACGGGAGCGTC
AAGCTGTGGATCAAGATCGGCGCGGGGCGGCAATTCGCCTGTCCGGGGAGTTTCATTTGCAGGTAGCGAAAATGGCGCAG
AATGCACCTTTGGCGCATTTTCTCGGCACGTTGGTGCCGTTGACCTCACTGGCGATTGCGCGATGCACAGAAACCACGCA
CAGCTGTTGCGGCTGGCAGGATCACGCCCGGATCGTCGAGGCGATCGAGCGTGATGACTCCGTCGAGGCGGCGTCGCTGA
TGAACCGTCATCTGGATCACCTGGAGCAGACGATTCTCAGCGGCTCCACGCACTGA

Upstream 100 bases:

>100_bases
GCGCCGGCACATCCTGCGTGAAGGCCAGCGGATGGGCATCGAGCTGAATATCCCGGATGACAACCTGAGCCACTGAAACG
CCTCACACTGGAGACCGGCC

Downstream 100 bases:

>100_bases
GAGCGCGGCGGACTCAGTTCGCCGCCACCCTGGCAAACCCCGCCCGGATTTTCTCTTCCGGCAAATCGTCAGCGATAAAC
ACGATCACGCTTTCCCGCGC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; Transcriptional Regulator Protein GntR Family; Transcriptional Regulator Gntr Family; Transcription Regulator Protein; Transcriptional Regulator Protein; GntR Family Regulatory Protein; GntR Family Transcription Regulator Protein; GntR-Family Transcriptional Regulator; GntR Domain-Containing Protein; Bacterial Regulatory Protein; FCD Domain Protein; Transcriptional Regulator GntR Family Protein; GntR-Type Regulator; TRANSCRIPTIONal REGULATOR GntR Family

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MNSLATPSHPRPTSAALPFSRLQAPVDDLYPRLFDAILEQRIDAASRFTEESLKQMFGVSRADVRRVLTQLSHEQIIVLR
ANHRPRVAAPDAEQTRQALHARRLAENTLVRLACQHAQAEDLKRLRALIERERQAVDQDRRGAAIRLSGEFHLQVAKMAQ
NAPLAHFLGTLVPLTSLAIARCTETTHSCCGWQDHARIVEAIERDDSVEAASLMNRHLDHLEQTILSGSTH

Sequences:

>Translated_231_residues
MNSLATPSHPRPTSAALPFSRLQAPVDDLYPRLFDAILEQRIDAASRFTEESLKQMFGVSRADVRRVLTQLSHEQIIVLR
ANHRPRVAAPDAEQTRQALHARRLAENTLVRLACQHAQAEDLKRLRALIERERQAVDQDRRGAAIRLSGEFHLQVAKMAQ
NAPLAHFLGTLVPLTSLAIARCTETTHSCCGWQDHARIVEAIERDDSVEAASLMNRHLDHLEQTILSGSTH
>Mature_231_residues
MNSLATPSHPRPTSAALPFSRLQAPVDDLYPRLFDAILEQRIDAASRFTEESLKQMFGVSRADVRRVLTQLSHEQIIVLR
ANHRPRVAAPDAEQTRQALHARRLAENTLVRLACQHAQAEDLKRLRALIERERQAVDQDRRGAAIRLSGEFHLQVAKMAQ
NAPLAHFLGTLVPLTSLAIARCTETTHSCCGWQDHARIVEAIERDDSVEAASLMNRHLDHLEQTILSGSTH

Specific function: Sialic acid (NANA) and N-acetylmannosamine utilization [C]

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25903; Mature: 25903

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLATPSHPRPTSAALPFSRLQAPVDDLYPRLFDAILEQRIDAASRFTEESLKQMFGVS
CCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RADVRRVLTQLSHEQIIVLRANHRPRVAAPDAEQTRQALHARRLAENTLVRLACQHAQAE
HHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
DLKRLRALIERERQAVDQDRRGAAIRLSGEFHLQVAKMAQNAPLAHFLGTLVPLTSLAIA
HHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RCTETTHSCCGWQDHARIVEAIERDDSVEAASLMNRHLDHLEQTILSGSTH
HHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNSLATPSHPRPTSAALPFSRLQAPVDDLYPRLFDAILEQRIDAASRFTEESLKQMFGVS
CCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RADVRRVLTQLSHEQIIVLRANHRPRVAAPDAEQTRQALHARRLAENTLVRLACQHAQAE
HHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
DLKRLRALIERERQAVDQDRRGAAIRLSGEFHLQVAKMAQNAPLAHFLGTLVPLTSLAIA
HHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RCTETTHSCCGWQDHARIVEAIERDDSVEAASLMNRHLDHLEQTILSGSTH
HHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA