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The map label for this gene is yedY [H]

Identifier: 77461005

GI number: 77461005

Start: 5399451

End: 5400464

Strand: Reverse

Name: yedY [H]

Synonym: Pfl01_4784

Alternate gene names: 77461005

Gene position: 5400464-5399451 (Counterclockwise)

Preceding gene: 77461006

Following gene: 77461004

Centisome position: 83.88

GC content: 56.21

Gene sequence:

>1014_bases
ATGCTGATCAAAGTCCCCAAAGCGTCCGATTGCCATGAGTCGGACGTCACGCCTGAATCCATTTATCTCTCTCGCCGGCA
ATTGCTCGGAGCGACCGCGGCTGGTTTGGCCATGAGCAGTCTGCCGCGCTGGGCCAGTGCCGAAGAGGCTGCCCGCTATG
CCGATGTCGAGGCCGGAAAGGCGCCCGCCTGGTTCAACGAGAAATTACCCTCTGTCAAATGGGGTGCGGTGAGCGTCAAG
GATGAGGCGATCACACCTTTCAAAGACGCGACCCATTACAACAACTTCTATGAATTCGGCACCGACAAGGGCGACCCGGC
GGCCAATGCCGGTTCGTTGAAAACCGAACCGTGGAGTGTTGTCGTGGACGGGGAGGTCGGTAAACCGGGGCGTTATGCCC
TGGAAGACTTCATGAAACCGTACCAGTTGGAGGAGCGTATCTATCGCCTTCGTTGTGTCGAGGCGTGGTCGATGGTGATT
CCCTGGATCGGTTTCCCCATTTCGGCGTTGTTGAAGCAGGTAGAGCCCACTTCCAATGCCAAATACATTCGCTTCGAAAC
CTTGCAGGATCCGAAGAGCATGCCCGGACAGCGTTCGGGATTTGCCTTGATCGATTGGCCCTATGTAGAAGGCTTGCGTC
TGGATGAGGCGATGAATCCCTTGGCGATTCTGGCGGTGGGTATGTATGGCCGTGAATTGCCAAACCAGAACGGTGCGCCG
TTGCGTCTGGTGGTGCCGTGGAAGTATGGCTTCAAGAGCGTCAAATCCATCGTGCGGATCAGTCTGGTCAGCGAACAGCC
GAAGACAACCTGGCAAAGCATTGCGGCGGATGAGTACGGGTTCTATGCGAATGTGAACCCCACGGTCGACCATCCTCGTT
GGACTCAGGCGCGGGAGCGGCGACTGCCTAACAGTCTGTTCAAACCGAATGTGCGTGATACGCAGATGTTCAACGGTTAT
GCGGACGAGGTCGCTTCTTTATATACAGGGCTCGATTTGCGGAAGAACTACTGA

Upstream 100 bases:

>100_bases
ATCTGTTGCATCTTCGTCGTCACAAACACGCCGAGTGATGTAATTTCCCTCATACTCCGCAGTCTATGGTGCATCTGTCC
TCCAAAGCTGCGGAGTTGCC

Downstream 100 bases:

>100_bases
TGCGATATCCGATCTGGCGCGTAGGTGTTTTCCTGGCTGCGGCGATCTGGCCGCTGTTGTGGTTCTATCAGGCCTTTGCG
GATCTGCTTGGGCCTGATCC

Product: putative sulfite oxidase subunit YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MLIKVPKASDCHESDVTPESIYLSRRQLLGATAAGLAMSSLPRWASAEEAARYADVEAGKAPAWFNEKLPSVKWGAVSVK
DEAITPFKDATHYNNFYEFGTDKGDPAANAGSLKTEPWSVVVDGEVGKPGRYALEDFMKPYQLEERIYRLRCVEAWSMVI
PWIGFPISALLKQVEPTSNAKYIRFETLQDPKSMPGQRSGFALIDWPYVEGLRLDEAMNPLAILAVGMYGRELPNQNGAP
LRLVVPWKYGFKSVKSIVRISLVSEQPKTTWQSIAADEYGFYANVNPTVDHPRWTQARERRLPNSLFKPNVRDTQMFNGY
ADEVASLYTGLDLRKNY

Sequences:

>Translated_337_residues
MLIKVPKASDCHESDVTPESIYLSRRQLLGATAAGLAMSSLPRWASAEEAARYADVEAGKAPAWFNEKLPSVKWGAVSVK
DEAITPFKDATHYNNFYEFGTDKGDPAANAGSLKTEPWSVVVDGEVGKPGRYALEDFMKPYQLEERIYRLRCVEAWSMVI
PWIGFPISALLKQVEPTSNAKYIRFETLQDPKSMPGQRSGFALIDWPYVEGLRLDEAMNPLAILAVGMYGRELPNQNGAP
LRLVVPWKYGFKSVKSIVRISLVSEQPKTTWQSIAADEYGFYANVNPTVDHPRWTQARERRLPNSLFKPNVRDTQMFNGY
ADEVASLYTGLDLRKNY
>Mature_337_residues
MLIKVPKASDCHESDVTPESIYLSRRQLLGATAAGLAMSSLPRWASAEEAARYADVEAGKAPAWFNEKLPSVKWGAVSVK
DEAITPFKDATHYNNFYEFGTDKGDPAANAGSLKTEPWSVVVDGEVGKPGRYALEDFMKPYQLEERIYRLRCVEAWSMVI
PWIGFPISALLKQVEPTSNAKYIRFETLQDPKSMPGQRSGFALIDWPYVEGLRLDEAMNPLAILAVGMYGRELPNQNGAP
LRLVVPWKYGFKSVKSIVRISLVSEQPKTTWQSIAADEYGFYANVNPTVDHPRWTQARERRLPNSLFKPNVRDTQMFNGY
ADEVASLYTGLDLRKNY

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=329, Percent_Identity=54.4072948328268, Blast_Score=346, Evalue=1e-96,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 37896; Mature: 37896

Theoretical pI: Translated: 7.48; Mature: 7.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIKVPKASDCHESDVTPESIYLSRRQLLGATAAGLAMSSLPRWASAEEAARYADVEAGK
CEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCC
APAWFNEKLPSVKWGAVSVKDEAITPFKDATHYNNFYEFGTDKGDPAANAGSLKTEPWSV
CCCCHHCCCCCCCCCEEEECCCCCCCCHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCEEE
VVDGEVGKPGRYALEDFMKPYQLEERIYRLRCVEAWSMVIPWIGFPISALLKQVEPTSNA
EEECCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC
KYIRFETLQDPKSMPGQRSGFALIDWPYVEGLRLDEAMNPLAILAVGMYGRELPNQNGAP
EEEEEEECCCHHHCCCCCCCEEEEECCCCCCEEHHHHCCCHHHHHHHHHHHHCCCCCCCC
LRLVVPWKYGFKSVKSIVRISLVSEQPKTTWQSIAADEYGFYANVNPTVDHPRWTQARER
EEEEECCHHCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHH
RLPNSLFKPNVRDTQMFNGYADEVASLYTGLDLRKNY
CCCHHHCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLIKVPKASDCHESDVTPESIYLSRRQLLGATAAGLAMSSLPRWASAEEAARYADVEAGK
CEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCC
APAWFNEKLPSVKWGAVSVKDEAITPFKDATHYNNFYEFGTDKGDPAANAGSLKTEPWSV
CCCCHHCCCCCCCCCEEEECCCCCCCCHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCEEE
VVDGEVGKPGRYALEDFMKPYQLEERIYRLRCVEAWSMVIPWIGFPISALLKQVEPTSNA
EEECCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC
KYIRFETLQDPKSMPGQRSGFALIDWPYVEGLRLDEAMNPLAILAVGMYGRELPNQNGAP
EEEEEEECCCHHHCCCCCCCEEEEECCCCCCEEHHHHCCCHHHHHHHHHHHHCCCCCCCC
LRLVVPWKYGFKSVKSIVRISLVSEQPKTTWQSIAADEYGFYANVNPTVDHPRWTQARER
EEEEECCHHCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHH
RLPNSLFKPNVRDTQMFNGYADEVASLYTGLDLRKNY
CCCHHHCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12928499 [H]