| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is rimI [H]
Identifier: 77460996
GI number: 77460996
Start: 5383065
End: 5383517
Strand: Reverse
Name: rimI [H]
Synonym: Pfl01_4775
Alternate gene names: 77460996
Gene position: 5383517-5383065 (Counterclockwise)
Preceding gene: 77460997
Following gene: 77460994
Centisome position: 83.62
GC content: 62.25
Gene sequence:
>453_bases ATGAGTGACGCTGTATCGTTTCGCCCGATGACCGAGGCGGATCTGGACGCCGTGCTGAAGATTGAATTCGCCGCGTACAG CCATCCGTGGACCCGCGGGATTTTTCTCGACGGCCTGGGCAAGTACCAGATCTGGCTGATGTTCGAAGGTGAGCAGCAGG TGGGACACGGGGTGGTGCAGATCATTCTCGATGAGGCGCACCTGCTCAACATCACGGTCAAGCCGGAAAACCAGGGGCGC GGGCTGGGGCTGACCCTGCTCGAATACCTGATGTCCCGCGCCTACGCCGCCGATGCCCGGGAATGCTTTCTGGAAGTGCG CGACAGCAACACCTCGGCCTTTCGCTTGTACGAGCGCTATGGCTTCAACGAGATCGGCCGGCGCCGGGATTACTACCCGG CGGTCGGCGGGCGTGAAGATGCCGTGGTCATGGCCTGCACGCTCGTCGACTGA
Upstream 100 bases:
>100_bases TGGGCCGTGCCGGGGCTGGAATTGTTGATGGATGAGCCACAGCGCAAGGCCGCGGTGTGGCAAGCCATGCGTCGGCTGAT GGCGCGCTGGAAAGAATCGA
Downstream 100 bases:
>100_bases TCGCGGCAGGTGTCCTCAGCGCTTGCGATCCAGCGGATCGCGGCGCGCCAGTTCCGCTTCATCCAGCCCGTTGCCGCCGC CGATGTCGTTGCCGTCGACC
Product: 30S ribosomal protein S18P alanine acetyltransferase
Products: NA
Alternate protein names: Acetylating enzyme for N-terminal of ribosomal protein S18 [H]
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MSDAVSFRPMTEADLDAVLKIEFAAYSHPWTRGIFLDGLGKYQIWLMFEGEQQVGHGVVQIILDEAHLLNITVKPENQGR GLGLTLLEYLMSRAYAADARECFLEVRDSNTSAFRLYERYGFNEIGRRRDYYPAVGGREDAVVMACTLVD
Sequences:
>Translated_150_residues MSDAVSFRPMTEADLDAVLKIEFAAYSHPWTRGIFLDGLGKYQIWLMFEGEQQVGHGVVQIILDEAHLLNITVKPENQGR GLGLTLLEYLMSRAYAADARECFLEVRDSNTSAFRLYERYGFNEIGRRRDYYPAVGGREDAVVMACTLVD >Mature_149_residues SDAVSFRPMTEADLDAVLKIEFAAYSHPWTRGIFLDGLGKYQIWLMFEGEQQVGHGVVQIILDEAHLLNITVKPENQGRG LGLTLLEYLMSRAYAADARECFLEVRDSNTSAFRLYERYGFNEIGRRRDYYPAVGGREDAVVMACTLVD
Specific function: This enzyme acetylates the N-terminal alanine of ribosomal protein S18 [H]
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI2367381, Length=136, Percent_Identity=40.4411764705882, Blast_Score=105, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR006464 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.128 [H]
Molecular weight: Translated: 17004; Mature: 16872
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAVSFRPMTEADLDAVLKIEFAAYSHPWTRGIFLDGLGKYQIWLMFEGEQQVGHGVVQ CCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEECCCCEEEEEEEECCHHHCCCEEE IILDEAHLLNITVKPENQGRGLGLTLLEYLMSRAYAADARECFLEVRDSNTSAFRLYERY EEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHEEEECCCCCCEEEHHHHC GFNEIGRRRDYYPAVGGREDAVVMACTLVD CCHHHCCCCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure SDAVSFRPMTEADLDAVLKIEFAAYSHPWTRGIFLDGLGKYQIWLMFEGEQQVGHGVVQ CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEECCCCEEEEEEEECCHHHCCCEEE IILDEAHLLNITVKPENQGRGLGLTLLEYLMSRAYAADARECFLEVRDSNTSAFRLYERY EEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHEEEECCCCCCEEEHHHHC GFNEIGRRRDYYPAVGGREDAVVMACTLVD CCHHHCCCCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]