Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is ybgA [H]

Identifier: 77460955

GI number: 77460955

Start: 5339377

End: 5340339

Strand: Direct

Name: ybgA [H]

Synonym: Pfl01_4734

Alternate gene names: 77460955

Gene position: 5339377-5340339 (Clockwise)

Preceding gene: 77460954

Following gene: 77460956

Centisome position: 82.93

GC content: 60.33

Gene sequence:

>963_bases
ATGTCCGACTCATCGACGTCCCTGCCAAAAATCGCCATCAGCGCCTGCCTGATGGGGGCCGAAGTTCGCTACAACGGCGG
CCACAAGGAATCGCGTTTGTGCAGCCGCACCCTGGCCGAGCATTTTGAGTTCGTTCCCGTCTGTCCTGAGGTAGCGATTG
GTCTCGGGATACCCCGCGAGCCGATTCGTCTGGTGGGCGACCCGCAAAAGCCTGATGCGGTCGGCACCGTCAATCCATCG
ATCAATGTTACCCAGCCACTGGCCGCTTACGGCGAGAAAATGGCCGGGGAACTCAGTGACATCTGCGGCTACATCTTCAT
GCAGCAATCGCCGTCCTGCGGACTGGAGCGGGTCAAGGTCTACCACGCCAACGGCGCACCGGTGAATGGTGGCGGGCGCG
GCATTTACGCCGACGCGTTCTGTGCACGGCATCCGGACCTGCCGGTGGAAGAAGCCGGGCGTCTTAATGATCCGGTGCTG
CGGGAAAATTTCATCACCCGCGTACTCGCCTACCGCGAATGGCAGCAAGTGCTCCAGCAAGGCTTGAGCCGCCGCGCGCT
CACCGACTTCCATTCGCGCTACAAATACCTGCTGATGGCTCACAATCCGGTGCAATACAAGGCGCTGGGCAATCTGCTGG
GCAACATGGGCCGGACCGACCCGATCGAACTGGGCCCACGCTATTTCAGTGAACTGATGGCGGCACTCAAGAAATGCGCC
ACCCGCCGCACCCACAGCAATGTCCTGCAGCACATCAGTGGCTACCTGAAGCAGGCCATCAGCCCAGAAGACAAACAGGA
AGTGCAGCACATCATCGGCCAATACCGACACGGCATCGTGCCGCTGGTGGTACCGCTGACGCTGCTCAAGCATCACTTTC
GCCTCCACCCGGATCCCTACATTGCGCAGCAGGTGTACCTGCAGCCGCATCCGGAAAACCTCAGTCTGCGAAACGCCATT
TGA

Upstream 100 bases:

>100_bases
AACTTATACAAAAAGTTTGACTTGTACACCCATGAATCTATGCTGAGAGAATGTTGTACAGATCTATTCGTCTGTACAGG
ATCAGATTCGAGGTTGTTGC

Downstream 100 bases:

>100_bases
TGAACGACTCACCCGACACCAGCGCCCGGGAAGACCTCGGCGCCGACTTCAAGAAAGCCCTCGACGAAGGCTGGCTGCCG
ATCCGCGAAGTCGCGCGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF169; TKP [H]

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MSDSSTSLPKIAISACLMGAEVRYNGGHKESRLCSRTLAEHFEFVPVCPEVAIGLGIPREPIRLVGDPQKPDAVGTVNPS
INVTQPLAAYGEKMAGELSDICGYIFMQQSPSCGLERVKVYHANGAPVNGGGRGIYADAFCARHPDLPVEEAGRLNDPVL
RENFITRVLAYREWQQVLQQGLSRRALTDFHSRYKYLLMAHNPVQYKALGNLLGNMGRTDPIELGPRYFSELMAALKKCA
TRRTHSNVLQHISGYLKQAISPEDKQEVQHIIGQYRHGIVPLVVPLTLLKHHFRLHPDPYIAQQVYLQPHPENLSLRNAI

Sequences:

>Translated_320_residues
MSDSSTSLPKIAISACLMGAEVRYNGGHKESRLCSRTLAEHFEFVPVCPEVAIGLGIPREPIRLVGDPQKPDAVGTVNPS
INVTQPLAAYGEKMAGELSDICGYIFMQQSPSCGLERVKVYHANGAPVNGGGRGIYADAFCARHPDLPVEEAGRLNDPVL
RENFITRVLAYREWQQVLQQGLSRRALTDFHSRYKYLLMAHNPVQYKALGNLLGNMGRTDPIELGPRYFSELMAALKKCA
TRRTHSNVLQHISGYLKQAISPEDKQEVQHIIGQYRHGIVPLVVPLTLLKHHFRLHPDPYIAQQVYLQPHPENLSLRNAI
>Mature_319_residues
SDSSTSLPKIAISACLMGAEVRYNGGHKESRLCSRTLAEHFEFVPVCPEVAIGLGIPREPIRLVGDPQKPDAVGTVNPSI
NVTQPLAAYGEKMAGELSDICGYIFMQQSPSCGLERVKVYHANGAPVNGGGRGIYADAFCARHPDLPVEEAGRLNDPVLR
ENFITRVLAYREWQQVLQQGLSRRALTDFHSRYKYLLMAHNPVQYKALGNLLGNMGRTDPIELGPRYFSELMAALKKCAT
RRTHSNVLQHISGYLKQAISPEDKQEVQHIIGQYRHGIVPLVVPLTLLKHHFRLHPDPYIAQQVYLQPHPENLSLRNAI

Specific function: Unknown

COG id: COG3272

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786925, Length=159, Percent_Identity=31.4465408805031, Blast_Score=98, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013560 [H]

Pfam domain/function: PF08349 DUF1722 [H]

EC number: NA

Molecular weight: Translated: 35630; Mature: 35499

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSSTSLPKIAISACLMGAEVRYNGGHKESRLCSRTLAEHFEFVPVCPEVAIGLGIPRE
CCCCCCCCHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCC
PIRLVGDPQKPDAVGTVNPSINVTQPLAAYGEKMAGELSDICGYIFMQQSPSCGLERVKV
CHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
YHANGAPVNGGGRGIYADAFCARHPDLPVEEAGRLNDPVLRENFITRVLAYREWQQVLQQ
EECCCCCCCCCCCCEEHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GLSRRALTDFHSRYKYLLMAHNPVQYKALGNLLGNMGRTDPIELGPRYFSELMAALKKCA
HHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHH
TRRTHSNVLQHISGYLKQAISPEDKQEVQHIIGQYRHGIVPLVVPLTLLKHHFRLHPDPY
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHH
IAQQVYLQPHPENLSLRNAI
HHHHHEECCCCCCCCCCCCC
>Mature Secondary Structure 
SDSSTSLPKIAISACLMGAEVRYNGGHKESRLCSRTLAEHFEFVPVCPEVAIGLGIPRE
CCCCCCCHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCC
PIRLVGDPQKPDAVGTVNPSINVTQPLAAYGEKMAGELSDICGYIFMQQSPSCGLERVKV
CHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
YHANGAPVNGGGRGIYADAFCARHPDLPVEEAGRLNDPVLRENFITRVLAYREWQQVLQQ
EECCCCCCCCCCCCEEHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GLSRRALTDFHSRYKYLLMAHNPVQYKALGNLLGNMGRTDPIELGPRYFSELMAALKKCA
HHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHH
TRRTHSNVLQHISGYLKQAISPEDKQEVQHIIGQYRHGIVPLVVPLTLLKHHFRLHPDPY
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHH
IAQQVYLQPHPENLSLRNAI
HHHHHEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6325460; 8905232; 9278503; 8387990 [H]