Click here to switch to the map view.

The map label for this gene is yhcB [C]

Identifier: 77460922

GI number: 77460922

Start: 5303483

End: 5303917

Strand: Direct

Name: yhcB [C]

Synonym: Pfl01_4701

Alternate gene names: 77460922

Gene position: 5303483-5303917 (Clockwise)

Preceding gene: 77460918

Following gene: 77460923

Centisome position: 82.37

GC content: 59.77

Gene sequence:

>435_bases
GTGGAACACTCGCTCTTAGTTTGGTTGTTACCGACTCTTGCCCTGGTTGTGGGTGTCGCCATTGGTTTCCTGATCGCTCG
CGTTGCGCCGAACGCCGCGCCCAGCCGCACGCAGCGTCAACTGGATGATATTCAGGAACGTTTCGACAGTTATCAGAACG
AAGTGGTGACCCACTTCAACAGCACCGCCAATCTGGTCAAGAAACTGACCCAGAGCTATCAGGAAGTGCAGGATCACCTC
GCCGACGGCGCCAACCGCCTGGCCCTGGACGAGCAGACCCGTCAACGCTTGCTCGCCTCGCTGCACTCTGAAGCAGCACA
GGCCCCACGGGAACGCCTGACACCACCACGGGATCAGGAACCTCCGCGTGACTACGCGCCGAAGACCCCGAACTCGCCGG
GCATGCTTGACGAGCATTACGGCCTGAAGAAGTAA

Upstream 100 bases:

>100_bases
TAGCAAATTGTCTGTGCCAGTCTATTGCGAGTGAATCGCGGTATACAGCGCAGGTTCGAGCCGTTAACGTAAAGCAAAGC
CGTTTATAGAGGAAGGACTC

Downstream 100 bases:

>100_bases
AATCTTCGCACCAGCGAAAGCCCTTGGACCAGTAATTGGCCAAGGGCTTTTCTGTTTTTTGCAGGATGTGCAGGGGCGAT
CATTTTATCAGGGCATATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MEHSLLVWLLPTLALVVGVAIGFLIARVAPNAAPSRTQRQLDDIQERFDSYQNEVVTHFNSTANLVKKLTQSYQEVQDHL
ADGANRLALDEQTRQRLLASLHSEAAQAPRERLTPPRDQEPPRDYAPKTPNSPGMLDEHYGLKK

Sequences:

>Translated_144_residues
MEHSLLVWLLPTLALVVGVAIGFLIARVAPNAAPSRTQRQLDDIQERFDSYQNEVVTHFNSTANLVKKLTQSYQEVQDHL
ADGANRLALDEQTRQRLLASLHSEAAQAPRERLTPPRDQEPPRDYAPKTPNSPGMLDEHYGLKK
>Mature_144_residues
MEHSLLVWLLPTLALVVGVAIGFLIARVAPNAAPSRTQRQLDDIQERFDSYQNEVVTHFNSTANLVKKLTQSYQEVQDHL
ADGANRLALDEQTRQRLLASLHSEAAQAPRERLTPPRDQEPPRDYAPKTPNSPGMLDEHYGLKK

Specific function: Unknown

COG id: COG3105

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16204; Mature: 16204

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHSLLVWLLPTLALVVGVAIGFLIARVAPNAAPSRTQRQLDDIQERFDSYQNEVVTHFN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
STANLVKKLTQSYQEVQDHLADGANRLALDEQTRQRLLASLHSEAAQAPRERLTPPRDQE
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCC
PPRDYAPKTPNSPGMLDEHYGLKK
CCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEHSLLVWLLPTLALVVGVAIGFLIARVAPNAAPSRTQRQLDDIQERFDSYQNEVVTHFN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
STANLVKKLTQSYQEVQDHLADGANRLALDEQTRQRLLASLHSEAAQAPRERLTPPRDQE
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCC
PPRDYAPKTPNSPGMLDEHYGLKK
CCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA