| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is tas [H]
Identifier: 77460916
GI number: 77460916
Start: 5296657
End: 5297697
Strand: Direct
Name: tas [H]
Synonym: Pfl01_4695
Alternate gene names: 77460916
Gene position: 5296657-5297697 (Clockwise)
Preceding gene: 77460908
Following gene: 77460918
Centisome position: 82.27
GC content: 60.81
Gene sequence:
>1041_bases ATGGACTATCGCCAGCTAGGCCGTACCGACCTGAACGTGAGTGCAATCTGCCTCGGCACCATGACCTGGGGCGAGCAAAA CACTGAAGCTGAAGCCTTCGCCCAGATCGAACGGGCAAAAGAGGCCGGGATCAATTTCCTCGACACTGCCGAAATGTACC CGGTGCCGCCAAAAGCCGACACCTACGCCACCACCGAGCGCTACATCGGCAATTACTTCAAGAGCCGTGGCGACCGCGCC GACTGGATTCTCGCCAGCAAGATCGCCGGCCCCGGCAACACCATCGACTACATCCGCGACAAGAACCTGCGCCACAACCG CCAGCACATCACCGAGGCCGTGGACGCCAGCCTCAAGCGCCTGCAGACCGACTACATCGACCTCTACCAGTTGCACTGGC CGGAGCGCAGCACCAACTTTTTCGGACAGCTGGGCTACAAGCACCAGACCGAAGCCAACCTGACGCCGCTCGAAGACACC CTTGAGGCGCTCGATGAGCAAGTGAAGGCCGGCAAGATCCGCCACATCGGTTTGTCCAACGAAACGCCGTGGGGCACCAT GCGATTTCTCGCCCTGGCCGAAGCCCGTGGCTGGCCGCGCGCTGTCTCGATCCAGAACCCGTACAACCTGCTCAACCGCA GTTTCGAGATCGGTCTGGCGGAAATCGCCATCCGTGAACAATGCGGCCTGCTCGCCTATTCGCCGCTGGCGTTCGGTTTC CTGTCGGGCAAGTACGAAGGTGGGGCGCGTCCACCGAAAGGCCGCCTGAGCCTCTACAGCCGTTTCAGCCGCTATTTCAA CCCGCAATCGGAAGCAGCATGCAGCCGTTACGTGGCGCTGGCCCGTGAACACGGCCTGGATCCGGCACAAATGGCCCTGG CCTTTGTGAATCAGCAACCGTTCGTCACCAGCAACATCATCGGGGCGACGACGCTGGAACAGCTGGACAGCAACATTGCG AGCTACGAGCTGAAACTGTCGAAGGAAGTGCTGGAAGGGATCGAAGCGATTCACAAGGATTATCCGAACCCGGCGCCGTG A
Upstream 100 bases:
>100_bases GCGGGGCATCACTTCCACTGCAGAAAGAGGTCGGCAATTATGCAGATTGCGAAAAAAATTTCAACCTGCTTTTATGCTTG TTTTGCCCAAGGAGCACCCG
Downstream 100 bases:
>100_bases TCAGCCGCTAAAAGCTTCGCGACCAGGCTCGCTCCCACAGGTACAGCGTGATGATTGTGGGAGCGAGCCTGCTCGCGAAG GGGCCAGTCAACTCACTGCA
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MDYRQLGRTDLNVSAICLGTMTWGEQNTEAEAFAQIERAKEAGINFLDTAEMYPVPPKADTYATTERYIGNYFKSRGDRA DWILASKIAGPGNTIDYIRDKNLRHNRQHITEAVDASLKRLQTDYIDLYQLHWPERSTNFFGQLGYKHQTEANLTPLEDT LEALDEQVKAGKIRHIGLSNETPWGTMRFLALAEARGWPRAVSIQNPYNLLNRSFEIGLAEIAIREQCGLLAYSPLAFGF LSGKYEGGARPPKGRLSLYSRFSRYFNPQSEAACSRYVALAREHGLDPAQMALAFVNQQPFVTSNIIGATTLEQLDSNIA SYELKLSKEVLEGIEAIHKDYPNPAP
Sequences:
>Translated_346_residues MDYRQLGRTDLNVSAICLGTMTWGEQNTEAEAFAQIERAKEAGINFLDTAEMYPVPPKADTYATTERYIGNYFKSRGDRA DWILASKIAGPGNTIDYIRDKNLRHNRQHITEAVDASLKRLQTDYIDLYQLHWPERSTNFFGQLGYKHQTEANLTPLEDT LEALDEQVKAGKIRHIGLSNETPWGTMRFLALAEARGWPRAVSIQNPYNLLNRSFEIGLAEIAIREQCGLLAYSPLAFGF LSGKYEGGARPPKGRLSLYSRFSRYFNPQSEAACSRYVALAREHGLDPAQMALAFVNQQPFVTSNIIGATTLEQLDSNIA SYELKLSKEVLEGIEAIHKDYPNPAP >Mature_346_residues MDYRQLGRTDLNVSAICLGTMTWGEQNTEAEAFAQIERAKEAGINFLDTAEMYPVPPKADTYATTERYIGNYFKSRGDRA DWILASKIAGPGNTIDYIRDKNLRHNRQHITEAVDASLKRLQTDYIDLYQLHWPERSTNFFGQLGYKHQTEANLTPLEDT LEALDEQVKAGKIRHIGLSNETPWGTMRFLALAEARGWPRAVSIQNPYNLLNRSFEIGLAEIAIREQCGLLAYSPLAFGF LSGKYEGGARPPKGRLSLYSRFSRYFNPQSEAACSRYVALAREHGLDPAQMALAFVNQQPFVTSNIIGATTLEQLDSNIA SYELKLSKEVLEGIEAIHKDYPNPAP
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=353, Percent_Identity=28.328611898017, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI4504825, Length=351, Percent_Identity=28.2051282051282, Blast_Score=118, Evalue=7e-27, Organism=Homo sapiens, GI27436964, Length=355, Percent_Identity=27.0422535211268, Blast_Score=108, Evalue=6e-24, Organism=Homo sapiens, GI27436962, Length=353, Percent_Identity=26.628895184136, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI27436966, Length=355, Percent_Identity=26.7605633802817, Blast_Score=105, Evalue=4e-23, Organism=Homo sapiens, GI27436971, Length=358, Percent_Identity=25.9776536312849, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI41152114, Length=234, Percent_Identity=28.2051282051282, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI41327764, Length=331, Percent_Identity=27.4924471299094, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI223718702, Length=343, Percent_Identity=26.530612244898, Blast_Score=72, Evalue=6e-13, Organism=Escherichia coli, GI1789199, Length=346, Percent_Identity=54.3352601156069, Blast_Score=379, Evalue=1e-106, Organism=Escherichia coli, GI87081735, Length=351, Percent_Identity=31.0541310541311, Blast_Score=149, Evalue=4e-37, Organism=Escherichia coli, GI1789375, Length=334, Percent_Identity=29.3413173652695, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1788070, Length=340, Percent_Identity=27.9411764705882, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI1788081, Length=336, Percent_Identity=28.5714285714286, Blast_Score=77, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6325169, Length=358, Percent_Identity=25.4189944134078, Blast_Score=98, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6319958, Length=320, Percent_Identity=26.25, Blast_Score=88, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6323998, Length=348, Percent_Identity=25.2873563218391, Blast_Score=84, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6319951, Length=345, Percent_Identity=23.4782608695652, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6322615, Length=268, Percent_Identity=23.5074626865672, Blast_Score=70, Evalue=4e-13, Organism=Drosophila melanogaster, GI24646159, Length=187, Percent_Identity=29.9465240641711, Blast_Score=66, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 38904; Mature: 38904
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYRQLGRTDLNVSAICLGTMTWGEQNTEAEAFAQIERAKEAGINFLDTAEMYPVPPKAD CCHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCC TYATTERYIGNYFKSRGDRADWILASKIAGPGNTIDYIRDKNLRHNRQHITEAVDASLKR CHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHH LQTDYIDLYQLHWPERSTNFFGQLGYKHQTEANLTPLEDTLEALDEQVKAGKIRHIGLSN HHHHHHHHHHEECCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCC ETPWGTMRFLALAEARGWPRAVSIQNPYNLLNRSFEIGLAEIAIREQCGLLAYSPLAFGF CCCCHHHHHHHHHHCCCCCCEEECCCHHHHHCCCHHHHHHHHHHHHHCCCEEECHHHHHH LSGKYEGGARPPKGRLSLYSRFSRYFNPQSEAACSRYVALAREHGLDPAQMALAFVNQQP HCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC FVTSNIIGATTLEQLDSNIASYELKLSKEVLEGIEAIHKDYPNPAP CCHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDYRQLGRTDLNVSAICLGTMTWGEQNTEAEAFAQIERAKEAGINFLDTAEMYPVPPKAD CCHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCC TYATTERYIGNYFKSRGDRADWILASKIAGPGNTIDYIRDKNLRHNRQHITEAVDASLKR CHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHH LQTDYIDLYQLHWPERSTNFFGQLGYKHQTEANLTPLEDTLEALDEQVKAGKIRHIGLSN HHHHHHHHHHEECCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCC ETPWGTMRFLALAEARGWPRAVSIQNPYNLLNRSFEIGLAEIAIREQCGLLAYSPLAFGF CCCCHHHHHHHHHHCCCCCCEEECCCHHHHHCCCHHHHHHHHHHHHHCCCEEECHHHHHH LSGKYEGGARPPKGRLSLYSRFSRYFNPQSEAACSRYVALAREHGLDPAQMALAFVNQQP HCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC FVTSNIIGATTLEQLDSNIASYELKLSKEVLEGIEAIHKDYPNPAP CCHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9560382; 9278503 [H]