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The map label for this gene is rsmI [H]

Identifier: 77460904

GI number: 77460904

Start: 5286947

End: 5287828

Strand: Reverse

Name: rsmI [H]

Synonym: Pfl01_4683

Alternate gene names: 77460904

Gene position: 5287828-5286947 (Counterclockwise)

Preceding gene: 77460909

Following gene: 77460903

Centisome position: 82.13

GC content: 60.2

Gene sequence:

>882_bases
GTGTGCGCTTTGACTGCTCCAGGTCCTTTGAATTCCGCTGCGGGCTCGCTTTATGTGGTGGCGACGCCCATCGGCAACCT
GGATGACATCAGTGCGCGGGCGTTGAAGATCCTGCGCGAGGTGGCGCTGATCGCCGCCGAAGACACGCGCCACTCACAGC
GCCTGATGCAGCACTTCGGCATCTCCACACCGCTGGCGGCCTGTCATGAACACAACGAGCGGGATGAAGGCAGTCGCTTC
ATAACTCGTCTGTTGGCAGGTGACAACGTTGCACTGATTTCCGATGCCGGTACGCCGCTGATCTCCGATCCTGGTTATCA
CCTGGTGCGTCAGGCGCGTGCCGCCGGGATCAATGTGGTGCCGGTGCCAGGTGCGTGCGCGTTGATCGCGGCATTGTCGG
CTGCCGGTCTGCCATCCGACCGTTTTATCTTCGAAGGCTTTTTGCCGGCCAAGGCCGTAGGGCGCAAGGCGCGGCTGGAA
GCTATCAAGGAAGAACCGCGCACGTTGATTTTCTACGAGGCGCCGCATCGTATTCTGGAATGCCTGCAGGATATGGAAGC
GGTGTTCGGCGCTGACCGTCCGGCATTGCTCGCTCGTGAAATCACCAAAACCTTCGAAACACTCAAGGGATTACCGCTGA
GCGAGTTGCGGGCATTCGTCGAGGCCGACAGCAATCAGCAGCGCGGCGAGTGCGTTGTTGTGGTGGCGGGCTGGACCGCA
CCGGAATCCGAAGACGCTGTCAGCAGCGAGGCGATGCGTATCCTTAACCTGTTGCTGGAAGAGATGCCGCTCAAGCGTGC
GGCAGCCCTGGCAGCGCAAATCACCGGTGAGCGCAAAAACGTGCTGTATCAGGTCGCGCTGGATCAGCAAAAAGATGCGT
AA

Upstream 100 bases:

>100_bases
AAGAGTGCGCAGCCTCACAATGGTGCGACAAACCGTGTCCGACCCGAGCGCATCGTTCGACGTACTACGCGCTACAATGG
CGGTTTTTACCGATCATGAG

Downstream 100 bases:

>100_bases
CCCGTCGCGCAGACCGGTTTGCGGGCTATTAGCGCTTGTTCTTCGGCCGCTCTGCCGTTAACCTGCGCGGCGGAGAGTCG
ATCGGACAGTCGCTGCCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MCALTAPGPLNSAAGSLYVVATPIGNLDDISARALKILREVALIAAEDTRHSQRLMQHFGISTPLAACHEHNERDEGSRF
ITRLLAGDNVALISDAGTPLISDPGYHLVRQARAAGINVVPVPGACALIAALSAAGLPSDRFIFEGFLPAKAVGRKARLE
AIKEEPRTLIFYEAPHRILECLQDMEAVFGADRPALLAREITKTFETLKGLPLSELRAFVEADSNQQRGECVVVVAGWTA
PESEDAVSSEAMRILNLLLEEMPLKRAAALAAQITGERKNVLYQVALDQQKDA

Sequences:

>Translated_293_residues
MCALTAPGPLNSAAGSLYVVATPIGNLDDISARALKILREVALIAAEDTRHSQRLMQHFGISTPLAACHEHNERDEGSRF
ITRLLAGDNVALISDAGTPLISDPGYHLVRQARAAGINVVPVPGACALIAALSAAGLPSDRFIFEGFLPAKAVGRKARLE
AIKEEPRTLIFYEAPHRILECLQDMEAVFGADRPALLAREITKTFETLKGLPLSELRAFVEADSNQQRGECVVVVAGWTA
PESEDAVSSEAMRILNLLLEEMPLKRAAALAAQITGERKNVLYQVALDQQKDA
>Mature_293_residues
MCALTAPGPLNSAAGSLYVVATPIGNLDDISARALKILREVALIAAEDTRHSQRLMQHFGISTPLAACHEHNERDEGSRF
ITRLLAGDNVALISDAGTPLISDPGYHLVRQARAAGINVVPVPGACALIAALSAAGLPSDRFIFEGFLPAKAVGRKARLE
AIKEEPRTLIFYEAPHRILECLQDMEAVFGADRPALLAREITKTFETLKGLPLSELRAFVEADSNQQRGECVVVVAGWTA
PESEDAVSSEAMRILNLLLEEMPLKRAAALAAQITGERKNVLYQVALDQQKDA

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=280, Percent_Identity=57.8571428571429, Blast_Score=314, Evalue=4e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 31537; Mature: 31537

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCALTAPGPLNSAAGSLYVVATPIGNLDDISARALKILREVALIAAEDTRHSQRLMQHFG
CCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
ISTPLAACHEHNERDEGSRFITRLLAGDNVALISDAGTPLISDPGYHLVRQARAAGINVV
CCCHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCEEE
PVPGACALIAALSAAGLPSDRFIFEGFLPAKAVGRKARLEAIKEEPRTLIFYEAPHRILE
ECCCHHHHHHHHHHCCCCCCCHHEECCCCHHHHCHHHHHHHHHCCCCEEEEECCHHHHHH
CLQDMEAVFGADRPALLAREITKTFETLKGLPLSELRAFVEADSNQQRGECVVVVAGWTA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEEECCCC
PESEDAVSSEAMRILNLLLEEMPLKRAAALAAQITGERKNVLYQVALDQQKDA
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHEEEEEECCCCCCC
>Mature Secondary Structure
MCALTAPGPLNSAAGSLYVVATPIGNLDDISARALKILREVALIAAEDTRHSQRLMQHFG
CCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
ISTPLAACHEHNERDEGSRFITRLLAGDNVALISDAGTPLISDPGYHLVRQARAAGINVV
CCCHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCEEE
PVPGACALIAALSAAGLPSDRFIFEGFLPAKAVGRKARLEAIKEEPRTLIFYEAPHRILE
ECCCHHHHHHHHHHCCCCCCCHHEECCCCHHHHCHHHHHHHHHCCCCEEEEECCHHHHHH
CLQDMEAVFGADRPALLAREITKTFETLKGLPLSELRAFVEADSNQQRGECVVVVAGWTA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEEECCCC
PESEDAVSSEAMRILNLLLEEMPLKRAAALAAQITGERKNVLYQVALDQQKDA
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]