| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yfhJ [C]
Identifier: 77460827
GI number: 77460827
Start: 5207240
End: 5207440
Strand: Reverse
Name: yfhJ [C]
Synonym: Pfl01_4606
Alternate gene names: 77460827
Gene position: 5207440-5207240 (Counterclockwise)
Preceding gene: 77460828
Following gene: 77460826
Centisome position: 80.88
GC content: 52.74
Gene sequence:
>201_bases ATGAGCTACGGTTGGAATGATGTTCAACGTATTGCAGAAGAGCTGGCTGAGGCCAAGCCGGGTGTAGATCCGTATTCTGT CAATTTCGTCGAGTTGCAGCAGTGGATCCAAGAGCTGCCGGACTTCGACAATACCTCTGGTCGTGTCGGCGAGAAGGTAT TGGAGGCGGTTCAGACTCTCTGGGCCGATGAATTGGACTGA
Upstream 100 bases:
>100_bases CTTGCCAGGCGATCGTCGGTGAAGAAGACATCACCGTCGAGATTCCGAAATATTCGCTTAACCATGCGGCCGAAGCGCCG CACTGACTGGTAAGACTGTC
Downstream 100 bases:
>100_bases TCGTCCTCGCAGGTTAGGCAATACCCAAGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGCAAATTACCGTTTCTGGA GTTACACCATGGCTGTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 66; Mature: 65
Protein sequence:
>66_residues MSYGWNDVQRIAEELAEAKPGVDPYSVNFVELQQWIQELPDFDNTSGRVGEKVLEAVQTLWADELD
Sequences:
>Translated_66_residues MSYGWNDVQRIAEELAEAKPGVDPYSVNFVELQQWIQELPDFDNTSGRVGEKVLEAVQTLWADELD >Mature_65_residues SYGWNDVQRIAEELAEAKPGVDPYSVNFVELQQWIQELPDFDNTSGRVGEKVLEAVQTLWADELD
Specific function: Unknown
COG id: COG2975
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfhJ [H]
Homologues:
Organism=Escherichia coli, GI1788873, Length=64, Percent_Identity=42.1875, Blast_Score=60, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007479 [H]
Pfam domain/function: PF04384 DUF528 [H]
EC number: NA
Molecular weight: Translated: 7541; Mature: 7410
Theoretical pI: Translated: 3.68; Mature: 3.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYGWNDVQRIAEELAEAKPGVDPYSVNFVELQQWIQELPDFDNTSGRVGEKVLEAVQTL CCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH WADELD HHHCCC >Mature Secondary Structure SYGWNDVQRIAEELAEAKPGVDPYSVNFVELQQWIQELPDFDNTSGRVGEKVLEAVQTL CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH WADELD HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8809750; 10984043 [H]