Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77460787

Identifier: 77460787

GI number: 77460787

Start: 5159702

End: 5160964

Strand: Reverse

Name: 77460787

Synonym: Pfl01_4566

Alternate gene names: NA

Gene position: 5160964-5159702 (Counterclockwise)

Preceding gene: 77460788

Following gene: 77460783

Centisome position: 80.16

GC content: 59.46

Gene sequence:

>1263_bases
ATGGATTTCAGCTTTGGAACAGTCAGGACGTTCGGTAAAGGATGGTTTTTTGTTCACGTGCTCGCAGGAGTGTTTTCGTC
CTCGGCGCTGGCGGTCACTCAAGAGATTCGCGCCAGTTTCATTCCCGATCCCGCCAATCCGCAAAACAATCAATTCATCA
ACCAGACCCCGCAGAGTGGTTATTGCGCCACGTACGTCAATGATTGCAAGGCCTACAACCTGTCCGGTCTACGGTTGCCA
CTGCGTTTTTCCGCAATCCACGCCATCGAACCCGGAGCGCCCGAACGGGCCGGGGCGACGCTCAAGGCGCCAGCGCAGTG
GCGAAGTCTGAACGTCTCGAATGTGGTGACGGGGGAGTCGCATCCCGTGGAAATCCGGATCGGAGCCCTTGGATCGCAAT
ATGTCCTGAGCGACACCGTGACCGATCTGACGGGTGCCTCGAACGATCTGGAGGGACACAATCGATTGTGGGTCGGTGGC
TCATGGGGAGGTGCGCCCGGCTCCTGTCAGCATGGCGCGATGGCCACCTACGGGCCTGACAGTTATACGTTTTTCTGGCG
GACCCCGAGCGATTCGGCGTGCAGCAAGGCAGCAGCCTACTCCATTCCGTGGATGACCTACGACTACCTGGATCTGGGTT
ACGAACTGCGCACCCCCGATCCCTTGGTCATGTCGGCGGGGCTGTACACGGGGGAACTGAGTTACTCCATCGCGCCTGGC
GGCGACTTTGACATGGGCGACAACATGCTGCCGGACAATTCGAGCCTTACCTTTCGCTTCGTACTGGATGTCCAGCATGT
ACTCAAGGTCGCCCTGCCGCCGGGTGGCAACAGGATCGAACTGGTGCCGCAGGGCGGCTGGCAGGCCTGGCTTCAGGAAG
GACGCCGGCCTGCACGACTGTTCCGGGATCAGACCTTCAACATTTCCGCCTCTTCGAAATTCAAGATGTTCTTCCAGTGC
GAGTATGGCGGTATCGGTGCCTGTGCCCTGCGTGATACCGAAACCGGCTCGACGTTCCCGCAGGTCTACCTCAGCGTGAG
CCTGCCTCACGGCATCACCGACATGGCCGGTCAACCGGTCAGACAAAGGCCTCTGACGGACGATTCGCAGGGGACGATCT
TTCAACCCAAGCGCGTTCTGGAGCGGGCGGCGGGCACCTTGCACTTTGAAATACCGGCGTTCTACGTGGAGCAGATGTTG
CAACCCGGCAAGGCCAGACGGTATGCCGGTAACATCACCGTGATCTGGGATTCGGAGGTCTAG

Upstream 100 bases:

>100_bases
TACGGCACCGTCAACATCATGTTCAGCGCGGCAGCTCCGGCGGGGTAATTGAAGGACAACCTCAAGCAATCACCACGGCT
TTCAGTGCAAGGAAGGGTCA

Downstream 100 bases:

>100_bases
GTCGCGCCTGTGCCACGCCCTGAAGGCAGCTGCCTTCAGGGCGTGGCGAGGGTCAGATCCTCGCCCGGCTCATGGCTTCG
CGGGTCAGCCTTCTGCTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MDFSFGTVRTFGKGWFFVHVLAGVFSSSALAVTQEIRASFIPDPANPQNNQFINQTPQSGYCATYVNDCKAYNLSGLRLP
LRFSAIHAIEPGAPERAGATLKAPAQWRSLNVSNVVTGESHPVEIRIGALGSQYVLSDTVTDLTGASNDLEGHNRLWVGG
SWGGAPGSCQHGAMATYGPDSYTFFWRTPSDSACSKAAAYSIPWMTYDYLDLGYELRTPDPLVMSAGLYTGELSYSIAPG
GDFDMGDNMLPDNSSLTFRFVLDVQHVLKVALPPGGNRIELVPQGGWQAWLQEGRRPARLFRDQTFNISASSKFKMFFQC
EYGGIGACALRDTETGSTFPQVYLSVSLPHGITDMAGQPVRQRPLTDDSQGTIFQPKRVLERAAGTLHFEIPAFYVEQML
QPGKARRYAGNITVIWDSEV

Sequences:

>Translated_420_residues
MDFSFGTVRTFGKGWFFVHVLAGVFSSSALAVTQEIRASFIPDPANPQNNQFINQTPQSGYCATYVNDCKAYNLSGLRLP
LRFSAIHAIEPGAPERAGATLKAPAQWRSLNVSNVVTGESHPVEIRIGALGSQYVLSDTVTDLTGASNDLEGHNRLWVGG
SWGGAPGSCQHGAMATYGPDSYTFFWRTPSDSACSKAAAYSIPWMTYDYLDLGYELRTPDPLVMSAGLYTGELSYSIAPG
GDFDMGDNMLPDNSSLTFRFVLDVQHVLKVALPPGGNRIELVPQGGWQAWLQEGRRPARLFRDQTFNISASSKFKMFFQC
EYGGIGACALRDTETGSTFPQVYLSVSLPHGITDMAGQPVRQRPLTDDSQGTIFQPKRVLERAAGTLHFEIPAFYVEQML
QPGKARRYAGNITVIWDSEV
>Mature_420_residues
MDFSFGTVRTFGKGWFFVHVLAGVFSSSALAVTQEIRASFIPDPANPQNNQFINQTPQSGYCATYVNDCKAYNLSGLRLP
LRFSAIHAIEPGAPERAGATLKAPAQWRSLNVSNVVTGESHPVEIRIGALGSQYVLSDTVTDLTGASNDLEGHNRLWVGG
SWGGAPGSCQHGAMATYGPDSYTFFWRTPSDSACSKAAAYSIPWMTYDYLDLGYELRTPDPLVMSAGLYTGELSYSIAPG
GDFDMGDNMLPDNSSLTFRFVLDVQHVLKVALPPGGNRIELVPQGGWQAWLQEGRRPARLFRDQTFNISASSKFKMFFQC
EYGGIGACALRDTETGSTFPQVYLSVSLPHGITDMAGQPVRQRPLTDDSQGTIFQPKRVLERAAGTLHFEIPAFYVEQML
QPGKARRYAGNITVIWDSEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45959; Mature: 45959

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFSFGTVRTFGKGWFFVHVLAGVFSSSALAVTQEIRASFIPDPANPQNNQFINQTPQSG
CCCCCCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
YCATYVNDCKAYNLSGLRLPLRFSAIHAIEPGAPERAGATLKAPAQWRSLNVSNVVTGES
EEEEEECCCCEECCCCEEEEEEEEEEEEECCCCCHHCCCEEECCCHHHCCCCCEEECCCC
HPVEIRIGALGSQYVLSDTVTDLTGASNDLEGHNRLWVGGSWGGAPGSCQHGAMATYGPD
CCEEEEEECCCCCEEEHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCC
SYTFFWRTPSDSACSKAAAYSIPWMTYDYLDLGYELRTPDPLVMSAGLYTGELSYSIAPG
CEEEEEECCCCHHHHHHHHEECCCEEEEHHHCCEEECCCCCEEEECCEEECEEEEEECCC
GDFDMGDNMLPDNSSLTFRFVLDVQHVLKVALPPGGNRIELVPQGGWQAWLQEGRRPARL
CCCCCCCCCCCCCCCEEEEEEEEHHHHHHEECCCCCCEEEEEECCCHHHHHHCCCCHHHH
FRDQTFNISASSKFKMFFQCEYGGIGACALRDTETGSTFPQVYLSVSLPHGITDMAGQPV
HCCCEEEECCCCCEEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEECCCCCHHHCCCCH
RQRPLTDDSQGTIFQPKRVLERAAGTLHFEIPAFYVEQMLQPGKARRYAGNITVIWDSEV
HCCCCCCCCCCCEECHHHHHHHHCCEEEEECHHHHHHHHHCCCCCCEEECCEEEEECCCC
>Mature Secondary Structure
MDFSFGTVRTFGKGWFFVHVLAGVFSSSALAVTQEIRASFIPDPANPQNNQFINQTPQSG
CCCCCCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
YCATYVNDCKAYNLSGLRLPLRFSAIHAIEPGAPERAGATLKAPAQWRSLNVSNVVTGES
EEEEEECCCCEECCCCEEEEEEEEEEEEECCCCCHHCCCEEECCCHHHCCCCCEEECCCC
HPVEIRIGALGSQYVLSDTVTDLTGASNDLEGHNRLWVGGSWGGAPGSCQHGAMATYGPD
CCEEEEEECCCCCEEEHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCC
SYTFFWRTPSDSACSKAAAYSIPWMTYDYLDLGYELRTPDPLVMSAGLYTGELSYSIAPG
CEEEEEECCCCHHHHHHHHEECCCEEEEHHHCCEEECCCCCEEEECCEEECEEEEEECCC
GDFDMGDNMLPDNSSLTFRFVLDVQHVLKVALPPGGNRIELVPQGGWQAWLQEGRRPARL
CCCCCCCCCCCCCCCEEEEEEEEHHHHHHEECCCCCCEEEEEECCCHHHHHHCCCCHHHH
FRDQTFNISASSKFKMFFQCEYGGIGACALRDTETGSTFPQVYLSVSLPHGITDMAGQPV
HCCCEEEECCCCCEEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEECCCCCHHHCCCCH
RQRPLTDDSQGTIFQPKRVLERAAGTLHFEIPAFYVEQMLQPGKARRYAGNITVIWDSEV
HCCCCCCCCCCCEECHHHHHHHHCCEEEEECHHHHHHHHHCCCCCCEEECCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA