| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460787
Identifier: 77460787
GI number: 77460787
Start: 5159702
End: 5160964
Strand: Reverse
Name: 77460787
Synonym: Pfl01_4566
Alternate gene names: NA
Gene position: 5160964-5159702 (Counterclockwise)
Preceding gene: 77460788
Following gene: 77460783
Centisome position: 80.16
GC content: 59.46
Gene sequence:
>1263_bases ATGGATTTCAGCTTTGGAACAGTCAGGACGTTCGGTAAAGGATGGTTTTTTGTTCACGTGCTCGCAGGAGTGTTTTCGTC CTCGGCGCTGGCGGTCACTCAAGAGATTCGCGCCAGTTTCATTCCCGATCCCGCCAATCCGCAAAACAATCAATTCATCA ACCAGACCCCGCAGAGTGGTTATTGCGCCACGTACGTCAATGATTGCAAGGCCTACAACCTGTCCGGTCTACGGTTGCCA CTGCGTTTTTCCGCAATCCACGCCATCGAACCCGGAGCGCCCGAACGGGCCGGGGCGACGCTCAAGGCGCCAGCGCAGTG GCGAAGTCTGAACGTCTCGAATGTGGTGACGGGGGAGTCGCATCCCGTGGAAATCCGGATCGGAGCCCTTGGATCGCAAT ATGTCCTGAGCGACACCGTGACCGATCTGACGGGTGCCTCGAACGATCTGGAGGGACACAATCGATTGTGGGTCGGTGGC TCATGGGGAGGTGCGCCCGGCTCCTGTCAGCATGGCGCGATGGCCACCTACGGGCCTGACAGTTATACGTTTTTCTGGCG GACCCCGAGCGATTCGGCGTGCAGCAAGGCAGCAGCCTACTCCATTCCGTGGATGACCTACGACTACCTGGATCTGGGTT ACGAACTGCGCACCCCCGATCCCTTGGTCATGTCGGCGGGGCTGTACACGGGGGAACTGAGTTACTCCATCGCGCCTGGC GGCGACTTTGACATGGGCGACAACATGCTGCCGGACAATTCGAGCCTTACCTTTCGCTTCGTACTGGATGTCCAGCATGT ACTCAAGGTCGCCCTGCCGCCGGGTGGCAACAGGATCGAACTGGTGCCGCAGGGCGGCTGGCAGGCCTGGCTTCAGGAAG GACGCCGGCCTGCACGACTGTTCCGGGATCAGACCTTCAACATTTCCGCCTCTTCGAAATTCAAGATGTTCTTCCAGTGC GAGTATGGCGGTATCGGTGCCTGTGCCCTGCGTGATACCGAAACCGGCTCGACGTTCCCGCAGGTCTACCTCAGCGTGAG CCTGCCTCACGGCATCACCGACATGGCCGGTCAACCGGTCAGACAAAGGCCTCTGACGGACGATTCGCAGGGGACGATCT TTCAACCCAAGCGCGTTCTGGAGCGGGCGGCGGGCACCTTGCACTTTGAAATACCGGCGTTCTACGTGGAGCAGATGTTG CAACCCGGCAAGGCCAGACGGTATGCCGGTAACATCACCGTGATCTGGGATTCGGAGGTCTAG
Upstream 100 bases:
>100_bases TACGGCACCGTCAACATCATGTTCAGCGCGGCAGCTCCGGCGGGGTAATTGAAGGACAACCTCAAGCAATCACCACGGCT TTCAGTGCAAGGAAGGGTCA
Downstream 100 bases:
>100_bases GTCGCGCCTGTGCCACGCCCTGAAGGCAGCTGCCTTCAGGGCGTGGCGAGGGTCAGATCCTCGCCCGGCTCATGGCTTCG CGGGTCAGCCTTCTGCTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MDFSFGTVRTFGKGWFFVHVLAGVFSSSALAVTQEIRASFIPDPANPQNNQFINQTPQSGYCATYVNDCKAYNLSGLRLP LRFSAIHAIEPGAPERAGATLKAPAQWRSLNVSNVVTGESHPVEIRIGALGSQYVLSDTVTDLTGASNDLEGHNRLWVGG SWGGAPGSCQHGAMATYGPDSYTFFWRTPSDSACSKAAAYSIPWMTYDYLDLGYELRTPDPLVMSAGLYTGELSYSIAPG GDFDMGDNMLPDNSSLTFRFVLDVQHVLKVALPPGGNRIELVPQGGWQAWLQEGRRPARLFRDQTFNISASSKFKMFFQC EYGGIGACALRDTETGSTFPQVYLSVSLPHGITDMAGQPVRQRPLTDDSQGTIFQPKRVLERAAGTLHFEIPAFYVEQML QPGKARRYAGNITVIWDSEV
Sequences:
>Translated_420_residues MDFSFGTVRTFGKGWFFVHVLAGVFSSSALAVTQEIRASFIPDPANPQNNQFINQTPQSGYCATYVNDCKAYNLSGLRLP LRFSAIHAIEPGAPERAGATLKAPAQWRSLNVSNVVTGESHPVEIRIGALGSQYVLSDTVTDLTGASNDLEGHNRLWVGG SWGGAPGSCQHGAMATYGPDSYTFFWRTPSDSACSKAAAYSIPWMTYDYLDLGYELRTPDPLVMSAGLYTGELSYSIAPG GDFDMGDNMLPDNSSLTFRFVLDVQHVLKVALPPGGNRIELVPQGGWQAWLQEGRRPARLFRDQTFNISASSKFKMFFQC EYGGIGACALRDTETGSTFPQVYLSVSLPHGITDMAGQPVRQRPLTDDSQGTIFQPKRVLERAAGTLHFEIPAFYVEQML QPGKARRYAGNITVIWDSEV >Mature_420_residues MDFSFGTVRTFGKGWFFVHVLAGVFSSSALAVTQEIRASFIPDPANPQNNQFINQTPQSGYCATYVNDCKAYNLSGLRLP LRFSAIHAIEPGAPERAGATLKAPAQWRSLNVSNVVTGESHPVEIRIGALGSQYVLSDTVTDLTGASNDLEGHNRLWVGG SWGGAPGSCQHGAMATYGPDSYTFFWRTPSDSACSKAAAYSIPWMTYDYLDLGYELRTPDPLVMSAGLYTGELSYSIAPG GDFDMGDNMLPDNSSLTFRFVLDVQHVLKVALPPGGNRIELVPQGGWQAWLQEGRRPARLFRDQTFNISASSKFKMFFQC EYGGIGACALRDTETGSTFPQVYLSVSLPHGITDMAGQPVRQRPLTDDSQGTIFQPKRVLERAAGTLHFEIPAFYVEQML QPGKARRYAGNITVIWDSEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45959; Mature: 45959
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFSFGTVRTFGKGWFFVHVLAGVFSSSALAVTQEIRASFIPDPANPQNNQFINQTPQSG CCCCCCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC YCATYVNDCKAYNLSGLRLPLRFSAIHAIEPGAPERAGATLKAPAQWRSLNVSNVVTGES EEEEEECCCCEECCCCEEEEEEEEEEEEECCCCCHHCCCEEECCCHHHCCCCCEEECCCC HPVEIRIGALGSQYVLSDTVTDLTGASNDLEGHNRLWVGGSWGGAPGSCQHGAMATYGPD CCEEEEEECCCCCEEEHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCC SYTFFWRTPSDSACSKAAAYSIPWMTYDYLDLGYELRTPDPLVMSAGLYTGELSYSIAPG CEEEEEECCCCHHHHHHHHEECCCEEEEHHHCCEEECCCCCEEEECCEEECEEEEEECCC GDFDMGDNMLPDNSSLTFRFVLDVQHVLKVALPPGGNRIELVPQGGWQAWLQEGRRPARL CCCCCCCCCCCCCCCEEEEEEEEHHHHHHEECCCCCCEEEEEECCCHHHHHHCCCCHHHH FRDQTFNISASSKFKMFFQCEYGGIGACALRDTETGSTFPQVYLSVSLPHGITDMAGQPV HCCCEEEECCCCCEEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEECCCCCHHHCCCCH RQRPLTDDSQGTIFQPKRVLERAAGTLHFEIPAFYVEQMLQPGKARRYAGNITVIWDSEV HCCCCCCCCCCCEECHHHHHHHHCCEEEEECHHHHHHHHHCCCCCCEEECCEEEEECCCC >Mature Secondary Structure MDFSFGTVRTFGKGWFFVHVLAGVFSSSALAVTQEIRASFIPDPANPQNNQFINQTPQSG CCCCCCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC YCATYVNDCKAYNLSGLRLPLRFSAIHAIEPGAPERAGATLKAPAQWRSLNVSNVVTGES EEEEEECCCCEECCCCEEEEEEEEEEEEECCCCCHHCCCEEECCCHHHCCCCCEEECCCC HPVEIRIGALGSQYVLSDTVTDLTGASNDLEGHNRLWVGGSWGGAPGSCQHGAMATYGPD CCEEEEEECCCCCEEEHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCC SYTFFWRTPSDSACSKAAAYSIPWMTYDYLDLGYELRTPDPLVMSAGLYTGELSYSIAPG CEEEEEECCCCHHHHHHHHEECCCEEEEHHHCCEEECCCCCEEEECCEEECEEEEEECCC GDFDMGDNMLPDNSSLTFRFVLDVQHVLKVALPPGGNRIELVPQGGWQAWLQEGRRPARL CCCCCCCCCCCCCCCEEEEEEEEHHHHHHEECCCCCCEEEEEECCCHHHHHHCCCCHHHH FRDQTFNISASSKFKMFFQCEYGGIGACALRDTETGSTFPQVYLSVSLPHGITDMAGQPV HCCCEEEECCCCCEEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEECCCCCHHHCCCCH RQRPLTDDSQGTIFQPKRVLERAAGTLHFEIPAFYVEQMLQPGKARRYAGNITVIWDSEV HCCCCCCCCCCCEECHHHHHHHHCCEEEEECHHHHHHHHHCCCCCCEEECCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA