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The map label for this gene is glpM [H]

Identifier: 77460762

GI number: 77460762

Start: 5116708

End: 5117046

Strand: Direct

Name: glpM [H]

Synonym: Pfl01_4541

Alternate gene names: 77460762

Gene position: 5116708-5117046 (Clockwise)

Preceding gene: 77460761

Following gene: 77460765

Centisome position: 79.47

GC content: 61.06

Gene sequence:

>339_bases
GTGGATCTGATTTTCAAGGCAATGCTCGGTGCGGCCGTGGTGGTGATCCTCGCCATGCTGGCCAAGACCAAAAACTACTA
CATTGCCGGGCTGGTGCCGCTGTTCCCGACCTTCGCCCTGATCGCCCACTACATCGTCGGCAAGGGCCGTTCGATCGACG
ACCTGAAGACCACCATCGTCTTCGGCATGTGGTCGATCATTCCGTACTTCGTCTATCTGGCGACGCTGTACGTGATGGTC
GACCGCATGCGCCTCGAAGCTTCGCTGGCGGTCGCGGCAGTGGCGTGGCTGATGGCGGCGACGGTGCTGGTGTCGGTGTG
GGTGCGGCTGCATGCATAA

Upstream 100 bases:

>100_bases
GCGGCAACCTGACCCAGGCCAGCCTGGAACTGGGCATGGCCAAGACCACGCTGTTCGACAAAGTGAAAAAATACGGCCTG
AGCCATTAAGCGAGAACAAC

Downstream 100 bases:

>100_bases
AAAATCACGCTCGTCACCGTTTACCGTTTACCGTGAGTCCAGCTATTTACATTGACTAGTTGTAAGGGCCCCATGGCAGT
TGTTCAAATGACCAACTATT

Product: GlpM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MDLIFKAMLGAAVVVILAMLAKTKNYYIAGLVPLFPTFALIAHYIVGKGRSIDDLKTTIVFGMWSIIPYFVYLATLYVMV
DRMRLEASLAVAAVAWLMAATVLVSVWVRLHA

Sequences:

>Translated_112_residues
MDLIFKAMLGAAVVVILAMLAKTKNYYIAGLVPLFPTFALIAHYIVGKGRSIDDLKTTIVFGMWSIIPYFVYLATLYVMV
DRMRLEASLAVAAVAWLMAATVLVSVWVRLHA
>Mature_112_residues
MDLIFKAMLGAAVVVILAMLAKTKNYYIAGLVPLFPTFALIAHYIVGKGRSIDDLKTTIVFGMWSIIPYFVYLATLYVMV
DRMRLEASLAVAAVAWLMAATVLVSVWVRLHA

Specific function: Could play a role in alginate biosynthesis. Overexpression may be lethal [H]

COG id: COG3136

COG function: function code R; Uncharacterized membrane protein required for alginate biosynthesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ydgC [H]

Homologues:

Organism=Escherichia coli, GI1787892, Length=111, Percent_Identity=57.6576576576577, Blast_Score=132, Evalue=4e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009707
- ProDom:   PD028709 [H]

Pfam domain/function: PF06942 GlpM [H]

EC number: NA

Molecular weight: Translated: 12396; Mature: 12396

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLIFKAMLGAAVVVILAMLAKTKNYYIAGLVPLFPTFALIAHYIVGKGRSIDDLKTTIV
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
FGMWSIIPYFVYLATLYVMVDRMRLEASLAVAAVAWLMAATVLVSVWVRLHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLIFKAMLGAAVVVILAMLAKTKNYYIAGLVPLFPTFALIAHYIVGKGRSIDDLKTTIV
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
FGMWSIIPYFVYLATLYVMVDRMRLEASLAVAAVAWLMAATVLVSVWVRLHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7642508; 10984043 [H]