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The map label for this gene is yggA [H]

Identifier: 77460706

GI number: 77460706

Start: 5056530

End: 5057132

Strand: Direct

Name: yggA [H]

Synonym: Pfl01_4485

Alternate gene names: 77460706

Gene position: 5056530-5057132 (Clockwise)

Preceding gene: 77460705

Following gene: 77460707

Centisome position: 78.54

GC content: 64.34

Gene sequence:

>603_bases
ATGTGGCAAAGCTATACCAACGGTTTGTTGGTGGCGTTCGGGCTGATCATGGCGATCGGTACCCAGAATGCCTTTGTCCT
GGCGCAGAGCCTGCGGCGTGAACATCACCTGCCGGTCGCTGCATTGTGCGTCGCCTGCGATGCGCTGCTGGTGGCGGCAG
GTGTGTTCGGTCTGGCCACGGTGCTGGCGCAGAACCCGACCTTGCTGGCGGTTGCCCGCTGGGGCGGCGCGGTGTTCCTG
ATCTGGTACGGCAGCCAGGCGCTGCGCCGGGCCTGTTCGAAACAGAGCCTGCAACAGGGTGAAAACCAGACCGTACGTTC
GCTGCGGGCGGTGATGCTCAGCGCTCTGGCGGTGACCCTGCTCAACCCGCACGTCTATCTCGACACCGTTTTGCTGATCG
GCTCCCTCGGTGCGCAGCAGTCGGTGCCCGGCGCTTATGTGGTCGGCGCGGCGAGTGCTTCGCTGCTGTGGTTCTTCACT
CTGGCGTTCGGCGCGGCATGGCTCGCGCCGTGGCTGGCACGGCCGAGTACCTGGCGGATTCTGGATCTGTTGGTGGCGGT
GATGATGTTCACGGTAGCGGGTCAGCTCATTCTGGCTTCGTGA

Upstream 100 bases:

>100_bases
TTGCCGGCTACTACCACGATCATTTGTTCGTCGGTCAGGCCGACGCCGAACGAGCCATGCAAGTGCTGCGCGATCTCGCA
GCCAACGCGGAGTAACCGTC

Downstream 100 bases:

>100_bases
TTATTCCAAACAGCTCTGGAACCTCTATCCCACACAGTTGTTGCGTGGTTAAGCCGCACCCCCGGTGCTATGATCCGAAC
CCTGCGCCGCAAAGAGTAAA

Product: lysine exporter protein LysE/YggA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MWQSYTNGLLVAFGLIMAIGTQNAFVLAQSLRREHHLPVAALCVACDALLVAAGVFGLATVLAQNPTLLAVARWGGAVFL
IWYGSQALRRACSKQSLQQGENQTVRSLRAVMLSALAVTLLNPHVYLDTVLLIGSLGAQQSVPGAYVVGAASASLLWFFT
LAFGAAWLAPWLARPSTWRILDLLVAVMMFTVAGQLILAS

Sequences:

>Translated_200_residues
MWQSYTNGLLVAFGLIMAIGTQNAFVLAQSLRREHHLPVAALCVACDALLVAAGVFGLATVLAQNPTLLAVARWGGAVFL
IWYGSQALRRACSKQSLQQGENQTVRSLRAVMLSALAVTLLNPHVYLDTVLLIGSLGAQQSVPGAYVVGAASASLLWFFT
LAFGAAWLAPWLARPSTWRILDLLVAVMMFTVAGQLILAS
>Mature_200_residues
MWQSYTNGLLVAFGLIMAIGTQNAFVLAQSLRREHHLPVAALCVACDALLVAAGVFGLATVLAQNPTLLAVARWGGAVFL
IWYGSQALRRACSKQSLQQGENQTVRSLRAVMLSALAVTLLNPHVYLDTVLLIGSLGAQQSVPGAYVVGAASASLLWFFT
LAFGAAWLAPWLARPSTWRILDLLVAVMMFTVAGQLILAS

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=199, Percent_Identity=43.21608040201, Blast_Score=140, Evalue=8e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 21323; Mature: 21323

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWQSYTNGLLVAFGLIMAIGTQNAFVLAQSLRREHHLPVAALCVACDALLVAAGVFGLAT
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
VLAQNPTLLAVARWGGAVFLIWYGSQALRRACSKQSLQQGENQTVRSLRAVMLSALAVTL
HHHCCCCEEEEEECCCEEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LNPHVYLDTVLLIGSLGAQQSVPGAYVVGAASASLLWFFTLAFGAAWLAPWLARPSTWRI
HCCHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LDLLVAVMMFTVAGQLILAS
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MWQSYTNGLLVAFGLIMAIGTQNAFVLAQSLRREHHLPVAALCVACDALLVAAGVFGLAT
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
VLAQNPTLLAVARWGGAVFLIWYGSQALRRACSKQSLQQGENQTVRSLRAVMLSALAVTL
HHHCCCCEEEEEECCCEEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LNPHVYLDTVLLIGSLGAQQSVPGAYVVGAASASLLWFFTLAFGAAWLAPWLARPSTWRI
HCCHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LDLLVAVMMFTVAGQLILAS
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9286976 [H]