| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460683
Identifier: 77460683
GI number: 77460683
Start: 5034290
End: 5034919
Strand: Direct
Name: 77460683
Synonym: Pfl01_4462
Alternate gene names: NA
Gene position: 5034290-5034919 (Clockwise)
Preceding gene: 77460682
Following gene: 77460686
Centisome position: 78.19
GC content: 64.29
Gene sequence:
>630_bases ATGCCCGATGACATCCATTTCTACGAACCGGCCAACGGCCACGGCCTGCCGCACGATCCGTTCAACGCCATCGTCGGCCC GCGTCCCATCGGCTGGATTTCTTCGCAGGATGCCGAGGGCCGGCTGAACCTGGCGCCCTACAGCTTTTTCAACGCGTTCA ACTACATTCCGCCGATCATCGGGTTCTCCAGCGTCGGTCGCAAAGACAGCCTGAACAACATCGAGCAGACCGGCGAATTC GTCTGGAACCTCGCCACCCGCCCGCTGGCCGAGCAGATGAACCAGAGCTGCGCGATGGTCGGGCCGGAGGTCAACGAGTT CGAACTGGCGGGGCTGACGCCGGTGGCGTCGAAAGTGATTGCCGTGCCGCGCGTGGCCGAAAGCCCGGTGTCCTTCGAAT GCAAGGTCACCCAGATCATTCAGTTGCAGCGCGCCGACGGCGAGACCGTGCCGAGCTGGCTGGTGCTCGGCGAAGTGGTT GCCGTGCACATTGCCAAATGGCTGTTGAAGGACGGGATCTACGACACCGCCGCCGCCGAACCGATACTGCGGGGCGGCGG GCCGGCGGACTACTTCCAGCTGGGGCCGGAGGCGTTGTTCAAGATGTGGCGCCCGGGGGCGACGAAGTAA
Upstream 100 bases:
>100_bases CGGCTTCGGTCGGGCTTAGTCATGTCTGGAGGGCTGGAAATCAGCCGCCCGTCCTTGCACTATGGCCGCTCTCTGACAGC CGTTTCCAGGAACACCCGCC
Downstream 100 bases:
>100_bases GCGCTTACCAGATCAGCTCGGCGTCGTCGGTGACGCCCTTGAGCTTGTCCAGCTCATTGATCGCGGCTTCATCGGCGGCG ATGGCGCCGGGAAAAACCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MPDDIHFYEPANGHGLPHDPFNAIVGPRPIGWISSQDAEGRLNLAPYSFFNAFNYIPPIIGFSSVGRKDSLNNIEQTGEF VWNLATRPLAEQMNQSCAMVGPEVNEFELAGLTPVASKVIAVPRVAESPVSFECKVTQIIQLQRADGETVPSWLVLGEVV AVHIAKWLLKDGIYDTAAAEPILRGGGPADYFQLGPEALFKMWRPGATK
Sequences:
>Translated_209_residues MPDDIHFYEPANGHGLPHDPFNAIVGPRPIGWISSQDAEGRLNLAPYSFFNAFNYIPPIIGFSSVGRKDSLNNIEQTGEF VWNLATRPLAEQMNQSCAMVGPEVNEFELAGLTPVASKVIAVPRVAESPVSFECKVTQIIQLQRADGETVPSWLVLGEVV AVHIAKWLLKDGIYDTAAAEPILRGGGPADYFQLGPEALFKMWRPGATK >Mature_208_residues PDDIHFYEPANGHGLPHDPFNAIVGPRPIGWISSQDAEGRLNLAPYSFFNAFNYIPPIIGFSSVGRKDSLNNIEQTGEFV WNLATRPLAEQMNQSCAMVGPEVNEFELAGLTPVASKVIAVPRVAESPVSFECKVTQIIQLQRADGETVPSWLVLGEVVA VHIAKWLLKDGIYDTAAAEPILRGGGPADYFQLGPEALFKMWRPGATK
Specific function: Unknown
COG id: COG1853
COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flavoredoxin family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002563 - InterPro: IPR012349 - InterPro: IPR009002 [H]
Pfam domain/function: PF01613 Flavin_Reduct [H]
EC number: NA
Molecular weight: Translated: 22831; Mature: 22700
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDDIHFYEPANGHGLPHDPFNAIVGPRPIGWISSQDAEGRLNLAPYSFFNAFNYIPPII CCCCCEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCHH GFSSVGRKDSLNNIEQTGEFVWNLATRPLAEQMNQSCAMVGPEVNEFELAGLTPVASKVI CHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCHHHCCCCCCCEEECCCCHHHHHHH AVPRVAESPVSFECKVTQIIQLQRADGETVPSWLVLGEVVAVHIAKWLLKDGIYDTAAAE HCCCCCCCCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHC PILRGGGPADYFQLGPEALFKMWRPGATK HHHCCCCCHHHHHCCHHHHHHHCCCCCCC >Mature Secondary Structure PDDIHFYEPANGHGLPHDPFNAIVGPRPIGWISSQDAEGRLNLAPYSFFNAFNYIPPII CCCCEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCHH GFSSVGRKDSLNNIEQTGEFVWNLATRPLAEQMNQSCAMVGPEVNEFELAGLTPVASKVI CHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCHHHCCCCCCCEEECCCCHHHHHHH AVPRVAESPVSFECKVTQIIQLQRADGETVPSWLVLGEVVAVHIAKWLLKDGIYDTAAAE HCCCCCCCCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHC PILRGGGPADYFQLGPEALFKMWRPGATK HHHCCCCCHHHHHCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]