| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460650
Identifier: 77460650
GI number: 77460650
Start: 4988597
End: 4989052
Strand: Direct
Name: 77460650
Synonym: Pfl01_4429
Alternate gene names: NA
Gene position: 4988597-4989052 (Clockwise)
Preceding gene: 77460645
Following gene: 77460652
Centisome position: 77.48
GC content: 64.47
Gene sequence:
>456_bases ATGGCATTTCGCCCTCTCACAGCCAGAGCGCCCGCCGTTCTGCTACGCGAAGCCAGGCCGTTGAAAGCCATCCTCGGTCA CGCCCAGCGCCTGGCTCATCTGCAACGTCTGCTCGAAAGCCAACTGCAACCCGCCGCCCGTGAACACTGCCACGTCGCCA AGTGGCGCGAAGGCGAACTGTTGCTGATCGTCACCGACGGTCATTGGGCCACGCGTCTGCGCTATCAGCAGAAACGTCTG CAACGGCAACTGCAGATGTTCGACGAGTTCGCCAATCTGACGCGGATCAAGTTCGCCGTGCGGCCACCGACCCTCCAGCG CGAGGCGAACGGGCCGACGATCGATCTGTCGACGGATGCGGCGGCGACCATCCAGGCCACCGCCGACGGGATCAGCGATC CGAATCTGCGGGCAGCACTGGAACGACTGGCCGCCCACGCCAAACCCAAGGCCTGA
Upstream 100 bases:
>100_bases AGTCGTTGATTTAATGGGCAAAGCAGGGACAAAAGCAATGGGCGAGTGAAATGGGTGCTATCTGCTACCATGGCGCCTCT GCAACTTCAGGTCCTAGATC
Downstream 100 bases:
>100_bases GCCTTATTGATCAGCGGCGTTTGCTGCCACCGAGCAATGACCCCATCAGGCCGCGCACCAATTGTTTACCCAGCGAGTTC GCTGCCTGGCGCATCGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MAFRPLTARAPAVLLREARPLKAILGHAQRLAHLQRLLESQLQPAAREHCHVAKWREGELLLIVTDGHWATRLRYQQKRL QRQLQMFDEFANLTRIKFAVRPPTLQREANGPTIDLSTDAAATIQATADGISDPNLRAALERLAAHAKPKA
Sequences:
>Translated_151_residues MAFRPLTARAPAVLLREARPLKAILGHAQRLAHLQRLLESQLQPAAREHCHVAKWREGELLLIVTDGHWATRLRYQQKRL QRQLQMFDEFANLTRIKFAVRPPTLQREANGPTIDLSTDAAATIQATADGISDPNLRAALERLAAHAKPKA >Mature_150_residues AFRPLTARAPAVLLREARPLKAILGHAQRLAHLQRLLESQLQPAAREHCHVAKWREGELLLIVTDGHWATRLRYQQKRLQ RQLQMFDEFANLTRIKFAVRPPTLQREANGPTIDLSTDAAATIQATADGISDPNLRAALERLAAHAKPKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16974; Mature: 16843
Theoretical pI: Translated: 11.40; Mature: 11.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFRPLTARAPAVLLREARPLKAILGHAQRLAHLQRLLESQLQPAAREHCHVAKWREGEL CCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCE LLIVTDGHWATRLRYQQKRLQRQLQMFDEFANLTRIKFAVRPPTLQREANGPTIDLSTDA EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEECCCC AATIQATADGISDPNLRAALERLAAHAKPKA CCEEEECCCCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure AFRPLTARAPAVLLREARPLKAILGHAQRLAHLQRLLESQLQPAAREHCHVAKWREGEL CCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCE LLIVTDGHWATRLRYQQKRLQRQLQMFDEFANLTRIKFAVRPPTLQREANGPTIDLSTDA EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEECCCC AATIQATADGISDPNLRAALERLAAHAKPKA CCEEEECCCCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA