| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460639
Identifier: 77460639
GI number: 77460639
Start: 4975426
End: 4975779
Strand: Reverse
Name: 77460639
Synonym: Pfl01_4418
Alternate gene names: NA
Gene position: 4975779-4975426 (Counterclockwise)
Preceding gene: 77460641
Following gene: 77460638
Centisome position: 77.28
GC content: 48.31
Gene sequence:
>354_bases GTGTCGGCGCAAACTTATATCACGCCGACCATGTTGGCGATACTTGCGCATTCAACCTTTCAGCTTCTTTACGAGCGTGT CGCAATCGGCTTGGTAGATGTCGCAAATTTACAGTCCAAATGCAATGGGACTGACAACTTCAGCGCTGTTTTACAGGGCT TGAGCATCGGTAAAAAAGAGTCCCTTGGCAAAACGCTTGAATCTCCATCGGGCAACCCTGCCACTGTTTTTATTGGGCTC AAGGCATCCACTTCTTGTGGTGCGCTTATAGTCCATATGGGTATGAATGCAACAAGCGTGCACAAACCGCTGAATTGTTC CGGTTTTTTTCAGAGCGCTCGTCTGACGCTGTAA
Upstream 100 bases:
>100_bases TCATGCTCCACTTCATCACGCGCATCGTGATTTGCTCCTTTGGTTTTAGAAGAGTACTGCCGTCCCACCTGTTTTATTAT CTGGGCGGCTCTTTCTTTTT
Downstream 100 bases:
>100_bases AAACCTCATAAAACCGGGGGCTTCGAGGGCCTGTCAGTCAGGCTTGACGCCATCCTTCGCATGGTGTTGCTCCGTGAGTT TTGCTACGCGACAACCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MSAQTYITPTMLAILAHSTFQLLYERVAIGLVDVANLQSKCNGTDNFSAVLQGLSIGKKESLGKTLESPSGNPATVFIGL KASTSCGALIVHMGMNATSVHKPLNCSGFFQSARLTL
Sequences:
>Translated_117_residues MSAQTYITPTMLAILAHSTFQLLYERVAIGLVDVANLQSKCNGTDNFSAVLQGLSIGKKESLGKTLESPSGNPATVFIGL KASTSCGALIVHMGMNATSVHKPLNCSGFFQSARLTL >Mature_116_residues SAQTYITPTMLAILAHSTFQLLYERVAIGLVDVANLQSKCNGTDNFSAVLQGLSIGKKESLGKTLESPSGNPATVFIGLK ASTSCGALIVHMGMNATSVHKPLNCSGFFQSARLTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12304; Mature: 12173
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAQTYITPTMLAILAHSTFQLLYERVAIGLVDVANLQSKCNGTDNFSAVLQGLSIGKKE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHH SLGKTLESPSGNPATVFIGLKASTSCGALIVHMGMNATSVHKPLNCSGFFQSARLTL HHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEECCCCHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SAQTYITPTMLAILAHSTFQLLYERVAIGLVDVANLQSKCNGTDNFSAVLQGLSIGKKE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHH SLGKTLESPSGNPATVFIGLKASTSCGALIVHMGMNATSVHKPLNCSGFFQSARLTL HHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEECCCCHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA