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The map label for this gene is tolR [H]

Identifier: 77460625

GI number: 77460625

Start: 4964957

End: 4965418

Strand: Reverse

Name: tolR [H]

Synonym: Pfl01_4404

Alternate gene names: 77460625

Gene position: 4965418-4964957 (Counterclockwise)

Preceding gene: 77460626

Following gene: 77460624

Centisome position: 77.12

GC content: 59.09

Gene sequence:

>462_bases
ATGGCTTTAATCACTCGAGCCCGACACAAGCGCAAGCCGGTCGCCGAGATGAACGTAGTGCCTTACATCGACGTGATGCT
GGTGCTGCTGGTCATCTTCATGGTGACTGCGCCGATGCTCAATCAGGGCGTGAAAGTGGATCTGCCCAAGGTTTCCAGCG
AAGCCTTGCCGCAGGACAACAACACCCAGGTGCTGACCATTTCGATCAAGTCGGACAAGACCTACTACTGGAACCTTGGC
AGCGAAGTCGACACCGAGAAGCAGCAGGACCGGGCCATGACCCTGCCACAGATGACCGACGCGGTGACCAAGATCATTCG
CGCCGGCACTGAAGGCGGCAAGCGTACCCAGGTCTTCATCCGTGGCGACAAGTCCGTCGATTATGGCTCCGTCATGGGCG
CCATGGGCGGGTTGCAGAAAGCCGGGGTCGGTAACGTTGGCTTGATCACCGAGGCGCCCTGA

Upstream 100 bases:

>100_bases
GCGAAACCTTGCTGAGCCGCTACTACACCTTCGCCGATGAGTTCCAGGCGATCCTGCACCGCAAAGTGCACACCAGCGAA
GAATAAGCAGGTATTTCCCG

Downstream 100 bases:

>100_bases
TGCAGCAACAGCGAGAGCCGTCCGCCTCGGAAAGCTACTTCTGGCCCAGTGTCTGGGCGATTGGCTTGCACGTGCTGGTG
TTCGGCATGCTGTTCGTCAG

Product: biopolymer transport protein ExbD/TolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MALITRARHKRKPVAEMNVVPYIDVMLVLLVIFMVTAPMLNQGVKVDLPKVSSEALPQDNNTQVLTISIKSDKTYYWNLG
SEVDTEKQQDRAMTLPQMTDAVTKIIRAGTEGGKRTQVFIRGDKSVDYGSVMGAMGGLQKAGVGNVGLITEAP

Sequences:

>Translated_153_residues
MALITRARHKRKPVAEMNVVPYIDVMLVLLVIFMVTAPMLNQGVKVDLPKVSSEALPQDNNTQVLTISIKSDKTYYWNLG
SEVDTEKQQDRAMTLPQMTDAVTKIIRAGTEGGKRTQVFIRGDKSVDYGSVMGAMGGLQKAGVGNVGLITEAP
>Mature_152_residues
ALITRARHKRKPVAEMNVVPYIDVMLVLLVIFMVTAPMLNQGVKVDLPKVSSEALPQDNNTQVLTISIKSDKTYYWNLGS
EVDTEKQQDRAMTLPQMTDAVTKIIRAGTEGGKRTQVFIRGDKSVDYGSVMGAMGGLQKAGVGNVGLITEAP

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=136, Percent_Identity=37.5, Blast_Score=89, Evalue=9e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 16680; Mature: 16549

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALITRARHKRKPVAEMNVVPYIDVMLVLLVIFMVTAPMLNQGVKVDLPKVSSEALPQDN
CCCCCCHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCC
NTQVLTISIKSDKTYYWNLGSEVDTEKQQDRAMTLPQMTDAVTKIIRAGTEGGKRTQVFI
CCEEEEEEEECCCEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEE
RGDKSVDYGSVMGAMGGLQKAGVGNVGLITEAP
ECCCCCCHHHHHHHHCCCCCCCCCCCCEEECCC
>Mature Secondary Structure 
ALITRARHKRKPVAEMNVVPYIDVMLVLLVIFMVTAPMLNQGVKVDLPKVSSEALPQDN
CCCCCHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCC
NTQVLTISIKSDKTYYWNLGSEVDTEKQQDRAMTLPQMTDAVTKIIRAGTEGGKRTQVFI
CCEEEEEEEECCCEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEE
RGDKSVDYGSVMGAMGGLQKAGVGNVGLITEAP
ECCCCCCHHHHHHHHCCCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]