| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is arcC [H]
Identifier: 77460609
GI number: 77460609
Start: 4947515
End: 4948444
Strand: Direct
Name: arcC [H]
Synonym: Pfl01_4388
Alternate gene names: 77460609
Gene position: 4947515-4948444 (Clockwise)
Preceding gene: 77460608
Following gene: 77460610
Centisome position: 76.84
GC content: 63.66
Gene sequence:
>930_bases ATGCGTATCGTCGTAGCTCTGGGCGGTAACGCCCTGCTCCGCCGTGGTGAGCCGATGACCGCTGACAACCAGCGCGCCAA CATCCGCATCGCCACCGAGCAAATCGCCAAGATCCACCCCGGCAACCAACTGGTCATCGCCCACGGCAATGGCCCGCAAG TCGGCCTGCTGTCGTTGCAGGCAGCGGCCTACACCTCCGTCACCCCTTACCCGCTGGACGTGCTCGGTGCCGAAACCGAA GGCATGATCGGCTACATCATCGAACAGGAACTGGGCAACCTGCTGGACTTCGAAGTCCCGTTCGCCACCCTGCTCACCCA GGTCGAAGTCGATGCCAACGACCCGGCGTTCAAGAATCCGACAAAACCGATCGGCCCGGTCTACGGGAAGGCCGAAGCAG AAAAACTCGCTGCTGAAAAAGGCTGGGCCATCGCCCCGGACGGCGACAAGTTCCGCCGTGTGGTGGCCAGCCCCCGGCCG AAACGCATCTTCGAAATCCGTCCGATCAAGTGGCTGCTGGACAAGGGCAGCATCGTGATCTGCGCCGGCGGTGGCGGCAT CCCCACCATGTACGGTGCTCACGGCAAGCTGCAAGGCATCGAAGCGGTGATCGACAAGGACCTGTGCTCGGCGCTGCTGG CCGAACAACTGGAGGCGGACTTGCTGGTGATCGCCACCGACGTCAACGCGGCGTACATCGACTTCAAGAAACCCACCGAG AAAGCCATCGCCCAGGCCCACCCGGACGAACTCGAACGCCTGGGCTTCGCCGCCGGCTCCATGGGGCCGAAGGTGCAGGC AGCCTGTGAATTTGCGCGCCATACTGGCAAGGTCGCGGTGATCGGTTCGCTCTCGGACATCGAAGCCATCGTCCAGGGCA CCGCCGGTACGCGGGTCAGCACGGCAGCACCGGGCATCACCTACCGATAA
Upstream 100 bases:
>100_bases TGGTGTCGACCCTGGCTGATCTGTAAGCGTTGCCCCTGACCTGCGGGCGTCGCCGAAGGCTGCGCCCGCAGGCTCACCGA ATTCTGAAAGGACATGCACC
Downstream 100 bases:
>100_bases AAAGAAACTCCGGGGGCAGACCTCAGGTCTGCCCTTCTCCCATGCCTTGAAAGGAGAAAACCATGGCCCAGTTCGAACCC GGTCATTTGCATATCGAGCG
Product: carbamate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MRIVVALGGNALLRRGEPMTADNQRANIRIATEQIAKIHPGNQLVIAHGNGPQVGLLSLQAAAYTSVTPYPLDVLGAETE GMIGYIIEQELGNLLDFEVPFATLLTQVEVDANDPAFKNPTKPIGPVYGKAEAEKLAAEKGWAIAPDGDKFRRVVASPRP KRIFEIRPIKWLLDKGSIVICAGGGGIPTMYGAHGKLQGIEAVIDKDLCSALLAEQLEADLLVIATDVNAAYIDFKKPTE KAIAQAHPDELERLGFAAGSMGPKVQAACEFARHTGKVAVIGSLSDIEAIVQGTAGTRVSTAAPGITYR
Sequences:
>Translated_309_residues MRIVVALGGNALLRRGEPMTADNQRANIRIATEQIAKIHPGNQLVIAHGNGPQVGLLSLQAAAYTSVTPYPLDVLGAETE GMIGYIIEQELGNLLDFEVPFATLLTQVEVDANDPAFKNPTKPIGPVYGKAEAEKLAAEKGWAIAPDGDKFRRVVASPRP KRIFEIRPIKWLLDKGSIVICAGGGGIPTMYGAHGKLQGIEAVIDKDLCSALLAEQLEADLLVIATDVNAAYIDFKKPTE KAIAQAHPDELERLGFAAGSMGPKVQAACEFARHTGKVAVIGSLSDIEAIVQGTAGTRVSTAAPGITYR >Mature_309_residues MRIVVALGGNALLRRGEPMTADNQRANIRIATEQIAKIHPGNQLVIAHGNGPQVGLLSLQAAAYTSVTPYPLDVLGAETE GMIGYIIEQELGNLLDFEVPFATLLTQVEVDANDPAFKNPTKPIGPVYGKAEAEKLAAEKGWAIAPDGDKFRRVVASPRP KRIFEIRPIKWLLDKGSIVICAGGGGIPTMYGAHGKLQGIEAVIDKDLCSALLAEQLEADLLVIATDVNAAYIDFKKPTE KAIAQAHPDELERLGFAAGSMGPKVQAACEFARHTGKVAVIGSLSDIEAIVQGTAGTRVSTAAPGITYR
Specific function: Arginine degradation via arginine deiminase; third step. [C]
COG id: COG0549
COG function: function code E; Carbamate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbamate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786732, Length=298, Percent_Identity=51.6778523489933, Blast_Score=280, Evalue=6e-77, Organism=Escherichia coli, GI1789238, Length=313, Percent_Identity=42.4920127795527, Blast_Score=194, Evalue=7e-51, Organism=Escherichia coli, GI1786516, Length=309, Percent_Identity=39.1585760517799, Blast_Score=169, Evalue=1e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR003964 [H]
Pfam domain/function: PF00696 AA_kinase [H]
EC number: =2.7.2.2 [H]
Molecular weight: Translated: 32751; Mature: 32751
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIVVALGGNALLRRGEPMTADNQRANIRIATEQIAKIHPGNQLVIAHGNGPQVGLLSLQ CEEEEEECCCEEEECCCCCCCCCCCCEEEEEEHHHHHCCCCCEEEEEECCCCCEEEEEEE AAAYTSVTPYPLDVLGAETEGMIGYIIEQELGNLLDFEVPFATLLTQVEVDANDPAFKNP HHHHCCCCCCCHHEECCCCCCCEEEEEHHHHCCCEECCCCHHHHHEEEEECCCCCCCCCC TKPIGPVYGKAEAEKLAAEKGWAIAPDGDKFRRVVASPRPKRIFEIRPIKWLLDKGSIVI CCCCCCCCCCHHHHHHHHHCCCEECCCCHHHHHHHCCCCCCEEEEECCEEEEECCCCEEE CAGGGGIPTMYGAHGKLQGIEAVIDKDLCSALLAEQLEADLLVIATDVNAAYIDFKKPTE EECCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCHH KAIAQAHPDELERLGFAAGSMGPKVQAACEFARHTGKVAVIGSLSDIEAIVQGTAGTRVS HHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCCCCEEE TAAPGITYR CCCCCCCCC >Mature Secondary Structure MRIVVALGGNALLRRGEPMTADNQRANIRIATEQIAKIHPGNQLVIAHGNGPQVGLLSLQ CEEEEEECCCEEEECCCCCCCCCCCCEEEEEEHHHHHCCCCCEEEEEECCCCCEEEEEEE AAAYTSVTPYPLDVLGAETEGMIGYIIEQELGNLLDFEVPFATLLTQVEVDANDPAFKNP HHHHCCCCCCCHHEECCCCCCCEEEEEHHHHCCCEECCCCHHHHHEEEEECCCCCCCCCC TKPIGPVYGKAEAEKLAAEKGWAIAPDGDKFRRVVASPRPKRIFEIRPIKWLLDKGSIVI CCCCCCCCCCHHHHHHHHHCCCEECCCCHHHHHHHCCCCCCEEEEECCEEEEECCCCEEE CAGGGGIPTMYGAHGKLQGIEAVIDKDLCSALLAEQLEADLLVIATDVNAAYIDFKKPTE EECCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCHH KAIAQAHPDELERLGFAAGSMGPKVQAACEFARHTGKVAVIGSLSDIEAIVQGTAGTRVS HHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCCCCEEE TAAPGITYR CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2537202; 10984043 [H]