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The map label for this gene is yihS [H]

Identifier: 77460592

GI number: 77460592

Start: 4924645

End: 4925904

Strand: Reverse

Name: yihS [H]

Synonym: Pfl01_4371

Alternate gene names: 77460592

Gene position: 4925904-4924645 (Counterclockwise)

Preceding gene: 77460593

Following gene: 77460591

Centisome position: 76.51

GC content: 63.81

Gene sequence:

>1260_bases
ATGGATCATTTCAATCCGGGCTTCAGCAGTTGGCTGAACGCCCCTGCCCACCAGCAATGGCTCGCCGATGAAGGCCTGCG
CCTGCTGGCATTTGCCAAGGCTTCACGGCTGCCCGAAGGGTTTGGCAATCTCGATGAGCGCGGCCAGCTCCAGGCCGGCG
CGCAAGCCGAAACCATGAACACCGCGCGCATGACCCACAGCTTCGCCATGGCCCACATTCAAGGCCTGCCGGGATTCGCC
GAGCTGGTCGATCACGGCATTGCGGCCCTGCGCGGCCCGTTGCGTGATGCGCTGCACGGTGGCTGGTTCGCCGTCGCCGA
ACACCGTGATGGCAACACCGGCAAGAATGCCTATCTGCATGCTTTCGTCGCCCTCGCGGCCAGTTCCGCTGTGGTCGCCC
AGCGTCCCGGCGCGCAGGCGTTGCTGGATGACGCCATCGACATCATCGACACGTATTTCTGGAGCGAAGAAGAGGGCGCC
ATGCGCGAATTCTTCAATCGCGACTGGCGCGAAGAGGAAGCCTATCGCGGCGCCAACAGCAACATGCACGCCACCGAAGC
GTTCCTCGCTTTGGCCGATGTCACCGACGACCCGCGCTGGCTGTTGCGTGCGCAGCGCATCGTCGAGCGGGTGATTCACG
GGCACGCCGCTGCCAACGATTACCTGGTGATCGAGCATTTCGACCGCAACTGGCAGCCGCTGCGCGAATACAACCATGAC
AATCCCGCCGACGGTTTCCGTCCCTACGGCACCACGCCGGGGCACGGTTTCGAGTGGGCGCGGCTGTTGCTGCACCTCGA
AGCCGCGCGGGTCCAGGCTGGCATGCTCACCCCCGGCTGGCTGGCCACCGATGCGCAAAAGCTGTTCGAACAAAACTGCC
GCCATGGCTGGGACGTCGATGGTGCGCCGGGCATCGTCTACACCCTCGACTGGAACAACAAAGCCGTGGTGCGCCATCGC
CTGCACTGGACTCACGCCGAGGCCAGCGCTGCCGCCAGTGCCTTGCTCAAACGCACCGGCGACGCGCAGTACGAAACCTG
GTATCGCCTGTTCTGGGAATTTTGCGAAACGTATTTCATCGACCGCTGCGACGGCAGCTGGCATCACGAACTCGACCCGC
AAAACCGCCCGAGCGCCGATATCTGGGCGGGCAAACCGGATCTGTACCACGCCTGGCAGGCTGTTCTGATTCCGCGTCTG
CCGCTGGCACCGAGCATGGCCAGTGCTCTGGCACACCTGTCTCGAAGCGTTCCTGTGTAA

Upstream 100 bases:

>100_bases
ATTGTCACCGCTCGGTGACAAAACCCGCCCCCTTCGTTACAAGACCCTCCCGGCCCGTTGTTTAGACTGCCCGCAGTCAT
AACAACAAAAAAGGCCACCC

Downstream 100 bases:

>100_bases
CCATGTGGTGACATTCGCGCGTCCCTTCGTTACCTGCGAGGGGAAACGCTCTGTTTAAACTCGTGTGCAGCGCAAGCACC
AGACTTGCATGCATAACAAC

Product: N-acylglucosamine 2-epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MDHFNPGFSSWLNAPAHQQWLADEGLRLLAFAKASRLPEGFGNLDERGQLQAGAQAETMNTARMTHSFAMAHIQGLPGFA
ELVDHGIAALRGPLRDALHGGWFAVAEHRDGNTGKNAYLHAFVALAASSAVVAQRPGAQALLDDAIDIIDTYFWSEEEGA
MREFFNRDWREEEAYRGANSNMHATEAFLALADVTDDPRWLLRAQRIVERVIHGHAAANDYLVIEHFDRNWQPLREYNHD
NPADGFRPYGTTPGHGFEWARLLLHLEAARVQAGMLTPGWLATDAQKLFEQNCRHGWDVDGAPGIVYTLDWNNKAVVRHR
LHWTHAEASAAASALLKRTGDAQYETWYRLFWEFCETYFIDRCDGSWHHELDPQNRPSADIWAGKPDLYHAWQAVLIPRL
PLAPSMASALAHLSRSVPV

Sequences:

>Translated_419_residues
MDHFNPGFSSWLNAPAHQQWLADEGLRLLAFAKASRLPEGFGNLDERGQLQAGAQAETMNTARMTHSFAMAHIQGLPGFA
ELVDHGIAALRGPLRDALHGGWFAVAEHRDGNTGKNAYLHAFVALAASSAVVAQRPGAQALLDDAIDIIDTYFWSEEEGA
MREFFNRDWREEEAYRGANSNMHATEAFLALADVTDDPRWLLRAQRIVERVIHGHAAANDYLVIEHFDRNWQPLREYNHD
NPADGFRPYGTTPGHGFEWARLLLHLEAARVQAGMLTPGWLATDAQKLFEQNCRHGWDVDGAPGIVYTLDWNNKAVVRHR
LHWTHAEASAAASALLKRTGDAQYETWYRLFWEFCETYFIDRCDGSWHHELDPQNRPSADIWAGKPDLYHAWQAVLIPRL
PLAPSMASALAHLSRSVPV
>Mature_419_residues
MDHFNPGFSSWLNAPAHQQWLADEGLRLLAFAKASRLPEGFGNLDERGQLQAGAQAETMNTARMTHSFAMAHIQGLPGFA
ELVDHGIAALRGPLRDALHGGWFAVAEHRDGNTGKNAYLHAFVALAASSAVVAQRPGAQALLDDAIDIIDTYFWSEEEGA
MREFFNRDWREEEAYRGANSNMHATEAFLALADVTDDPRWLLRAQRIVERVIHGHAAANDYLVIEHFDRNWQPLREYNHD
NPADGFRPYGTTPGHGFEWARLLLHLEAARVQAGMLTPGWLATDAQKLFEQNCRHGWDVDGAPGIVYTLDWNNKAVVRHR
LHWTHAEASAAASALLKRTGDAQYETWYRLFWEFCETYFIDRCDGSWHHELDPQNRPSADIWAGKPDLYHAWQAVLIPRL
PLAPSMASALAHLSRSVPV

Specific function: Unknown

COG id: COG2942

COG function: function code G; N-acyl-D-glucosamine 2-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acylglucosamine 2-epimerase family [H]

Homologues:

Organism=Escherichia coli, GI87082342, Length=403, Percent_Identity=47.394540942928, Blast_Score=372, Evalue=1e-104,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR010819 [H]

Pfam domain/function: PF07221 GlcNAc_2-epim [H]

EC number: 5.-.-.- [C]

Molecular weight: Translated: 47122; Mature: 47122

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHFNPGFSSWLNAPAHQQWLADEGLRLLAFAKASRLPEGFGNLDERGQLQAGAQAETMN
CCCCCCCHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
TARMTHSFAMAHIQGLPGFAELVDHGIAALRGPLRDALHGGWFAVAEHRDGNTGKNAYLH
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHH
AFVALAASSAVVAQRPGAQALLDDAIDIIDTYFWSEEEGAMREFFNRDWREEEAYRGANS
HHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHCCCCC
NMHATEAFLALADVTDDPRWLLRAQRIVERVIHGHAAANDYLVIEHFDRNWQPLREYNHD
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHCCCC
NPADGFRPYGTTPGHGFEWARLLLHLEAARVQAGMLTPGWLATDAQKLFEQNCRHGWDVD
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC
GAPGIVYTLDWNNKAVVRHRLHWTHAEASAAASALLKRTGDAQYETWYRLFWEFCETYFI
CCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
DRCDGSWHHELDPQNRPSADIWAGKPDLYHAWQAVLIPRLPLAPSMASALAHLSRSVPV
HCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDHFNPGFSSWLNAPAHQQWLADEGLRLLAFAKASRLPEGFGNLDERGQLQAGAQAETMN
CCCCCCCHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
TARMTHSFAMAHIQGLPGFAELVDHGIAALRGPLRDALHGGWFAVAEHRDGNTGKNAYLH
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHH
AFVALAASSAVVAQRPGAQALLDDAIDIIDTYFWSEEEGAMREFFNRDWREEEAYRGANS
HHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHCCCCC
NMHATEAFLALADVTDDPRWLLRAQRIVERVIHGHAAANDYLVIEHFDRNWQPLREYNHD
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHCCCC
NPADGFRPYGTTPGHGFEWARLLLHLEAARVQAGMLTPGWLATDAQKLFEQNCRHGWDVD
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC
GAPGIVYTLDWNNKAVVRHRLHWTHAEASAAASALLKRTGDAQYETWYRLFWEFCETYFI
CCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
DRCDGSWHHELDPQNRPSADIWAGKPDLYHAWQAVLIPRLPLAPSMASALAHLSRSVPV
HCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503 [H]