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The map label for this gene is 77460581

Identifier: 77460581

GI number: 77460581

Start: 4912703

End: 4913419

Strand: Reverse

Name: 77460581

Synonym: Pfl01_4360

Alternate gene names: NA

Gene position: 4913419-4912703 (Counterclockwise)

Preceding gene: 77460582

Following gene: 77460578

Centisome position: 76.31

GC content: 62.06

Gene sequence:

>717_bases
ATGGATCACCAGCCTTCAGCTCCAACGGTTTATCAACTGGCCCCCGAGCAAGTCGCCGGGCCATATTTCCGCAATCCCAA
GCTGCTGCGTCGCAACATCAGCGAAGGCGCCGAAGGCCTGCCGTTGCTGCTGCGCCTGACCATCGTCGATGCCATGACCG
CCGAGCCGATCAGCGGTGCGCTGGTGGATATCTGGCACTGCAACGCACGCGGCGCCTATTCCGGCTGGAGCCGGGTGAAC
CCGGATCTGGAAGTCGACGTTGAGGATATCGGCTCGATCCCGCGAACCGACGACGACACTTATTTGCGCGGCGGTCAGTT
CAGCGACCACAAGGGCAGGGTGCGCTTCACCACGATCTATCCGGGTTTCTACGCCGGTCGCACCCTGCATGTTCACGTGG
CGGTGCGCATCGTCGCCGGCAACGAATACCTGGAGGAGCGCAATGTGGCCTGGGTCGGGCAGCTGTATTTTCCGGAGGTG
GTTTCCCGCGGCGTGCTCAATGCCAAGGCCTACCGCGGGCGCAGTTCGCTGCCGGTGTGCAACAACGACGATGCCTACTA
CGCCAACATGGGCGGCGAAGAGTCGACCCTGACGGTGTGGCCGATCGGTCGTGATTCACACGAGGACGGGTACTTCGGCC
ACCTCACGATCGGCATCGACACCTTTGCGGTGTCGTCGCAGATCAAGCCCGAGGACTTCGACAAGTACACGGTTTAA

Upstream 100 bases:

>100_bases
TTTGCCCGAAAACCTTCGTTATCTCGAGATACATAGTTACCGCACCTGGCTGCGCGTGTGGCGTTAACCTGCGTTCATCT
TATGGAAGAGAGAGCGCGTC

Downstream 100 bases:

>100_bases
CGCAGTTCATTCAACGCCAGAACCAGCTGCTGAATCTCCGCCGCCGTCGTGGTCAGCGACGGCGTGACACGGATGCACGG
CCCGCAGGCAGCGCCGTTGC

Product: intradiol ring-cleavage dioxygenase

Products: NA

Alternate protein names: Protocatechuate Dioxygenase; Dioxygenase; Twin-Arginine Translocation Pathway Signal; Protocatechuate 3 4-Dioxygenase Beta Chain; Protocatechuate 3 4-Dioxygenase; Dioxygenase Subfamily Protein; Protocatechuate 3 4-Dioxygenase Beta Subunit Like Protein; Protocatechuate 3,4-Dioxygenase Protein Beta Chain; Intradiol-Dioxygenase-Like Protein; Protocatechuate 3 4-Dioxygenase Subunit Beta; Catechol 1 2-Dioxygenase; Ring-Cleaving Dioxygenase Protein; Intradiol Dioxygenase

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MDHQPSAPTVYQLAPEQVAGPYFRNPKLLRRNISEGAEGLPLLLRLTIVDAMTAEPISGALVDIWHCNARGAYSGWSRVN
PDLEVDVEDIGSIPRTDDDTYLRGGQFSDHKGRVRFTTIYPGFYAGRTLHVHVAVRIVAGNEYLEERNVAWVGQLYFPEV
VSRGVLNAKAYRGRSSLPVCNNDDAYYANMGGEESTLTVWPIGRDSHEDGYFGHLTIGIDTFAVSSQIKPEDFDKYTV

Sequences:

>Translated_238_residues
MDHQPSAPTVYQLAPEQVAGPYFRNPKLLRRNISEGAEGLPLLLRLTIVDAMTAEPISGALVDIWHCNARGAYSGWSRVN
PDLEVDVEDIGSIPRTDDDTYLRGGQFSDHKGRVRFTTIYPGFYAGRTLHVHVAVRIVAGNEYLEERNVAWVGQLYFPEV
VSRGVLNAKAYRGRSSLPVCNNDDAYYANMGGEESTLTVWPIGRDSHEDGYFGHLTIGIDTFAVSSQIKPEDFDKYTV
>Mature_238_residues
MDHQPSAPTVYQLAPEQVAGPYFRNPKLLRRNISEGAEGLPLLLRLTIVDAMTAEPISGALVDIWHCNARGAYSGWSRVN
PDLEVDVEDIGSIPRTDDDTYLRGGQFSDHKGRVRFTTIYPGFYAGRTLHVHVAVRIVAGNEYLEERNVAWVGQLYFPEV
VSRGVLNAKAYRGRSSLPVCNNDDAYYANMGGEESTLTVWPIGRDSHEDGYFGHLTIGIDTFAVSSQIKPEDFDKYTV

Specific function: Unknown

COG id: COG3485

COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26496; Mature: 26496

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHQPSAPTVYQLAPEQVAGPYFRNPKLLRRNISEGAEGLPLLLRLTIVDAMTAEPISGA
CCCCCCCCEEEEECHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCCCCC
LVDIWHCNARGAYSGWSRVNPDLEVDVEDIGSIPRTDDDTYLRGGQFSDHKGRVRFTTIY
EEEEEECCCCCCCCCHHHCCCCCEECHHHHCCCCCCCCCCEEECCCCCCCCCCEEEEEEC
PGFYAGRTLHVHVAVRIVAGNEYLEERNVAWVGQLYFPEVVSRGVLNAKAYRGRSSLPVC
CCCCCCCEEEEEEEEEEEECCHHHHHCCEEEEEEEHHHHHHHCCCCCCHHHCCCCCCCEE
NNDDAYYANMGGEESTLTVWPIGRDSHEDGYFGHLTIGIDTFAVSSQIKPEDFDKYTV
CCCCCEEEECCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MDHQPSAPTVYQLAPEQVAGPYFRNPKLLRRNISEGAEGLPLLLRLTIVDAMTAEPISGA
CCCCCCCCEEEEECHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCCCCC
LVDIWHCNARGAYSGWSRVNPDLEVDVEDIGSIPRTDDDTYLRGGQFSDHKGRVRFTTIY
EEEEEECCCCCCCCCHHHCCCCCEECHHHHCCCCCCCCCCEEECCCCCCCCCCEEEEEEC
PGFYAGRTLHVHVAVRIVAGNEYLEERNVAWVGQLYFPEVVSRGVLNAKAYRGRSSLPVC
CCCCCCCEEEEEEEEEEEECCHHHHHCCEEEEEEEHHHHHHHCCCCCCHHHCCCCCCCEE
NNDDAYYANMGGEESTLTVWPIGRDSHEDGYFGHLTIGIDTFAVSSQIKPEDFDKYTV
CCCCCEEEECCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA