Click here to switch to the map view.

The map label for this gene is ribH [H]

Identifier: 77460499

GI number: 77460499

Start: 4827130

End: 4827639

Strand: Direct

Name: ribH [H]

Synonym: Pfl01_4278

Alternate gene names: 77460499

Gene position: 4827130-4827639 (Clockwise)

Preceding gene: 77460493

Following gene: 77460507

Centisome position: 74.97

GC content: 60.2

Gene sequence:

>510_bases
ATGCAACCCACCGCTATCGACAGCAAAAGCAAACACACCCACGGCGAGCGCGTCGCGTTCATCCAGGCCTGCTGGCACAA
GGAAATCGTCGACCAGAGCCGTAAAGGCTTCCTCGCCGAAATGATCGCTCAGGGTTATCAGGAATCGGACATCGATTTCT
TCGAAGTCGGCGGCGCCTTTGAAATGCCCCTGCACGCCAAGCTGCTGGCCAAGACCGGTCGTTATGCCGGTATCGTTGCC
GCCGCCCTGGTGGTGGACGGCGGAATCTACCGTCACGAGTTCGTCGCCCAGTCGGTGGTCAGCGGCCTGATGCAGGTGCA
GCTGGAAACCGAAGTGCCGGTGTTTTCGGTGTCGCTGACCCCGCACCACTTCCATGCCGGCGAAGAACACCAGAAGTTCT
TCTTCGAGCATTTCGTGCACAAGGGTCAGGAAGCGGCGAAGACCTGCGCCGATACGTTGCAGAAAGTGCGTGCATTGCGC
CGCACCGAGCCGCGTGCTGTAGCGGTCTGA

Upstream 100 bases:

>100_bases
GACGCCAAAGGGCCGTCCGCCGCGTTCGCGCGAGCGTGCGTACCCTTGAATCCCTTTCGATTCATAACGCCCTGTTTTTC
ACACAAACAGGAGTCAGAAC

Downstream 100 bases:

>100_bases
TGCAATAACGATCTCCCCCGCGCGCTGCGTGGGGGAGATTTCAGTGTCAGGCAAGATTTTCGTCAGTGGTCGGCACGATC
AGAATACCCGCCCGCAGGCC

Product: riboflavin synthase subunit beta

Products: NA

Alternate protein names: DMRL synthase 2; Lumazine synthase 2; Riboflavin synthase 2 beta chain [H]

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MQPTAIDSKSKHTHGERVAFIQACWHKEIVDQSRKGFLAEMIAQGYQESDIDFFEVGGAFEMPLHAKLLAKTGRYAGIVA
AALVVDGGIYRHEFVAQSVVSGLMQVQLETEVPVFSVSLTPHHFHAGEEHQKFFFEHFVHKGQEAAKTCADTLQKVRALR
RTEPRAVAV

Sequences:

>Translated_169_residues
MQPTAIDSKSKHTHGERVAFIQACWHKEIVDQSRKGFLAEMIAQGYQESDIDFFEVGGAFEMPLHAKLLAKTGRYAGIVA
AALVVDGGIYRHEFVAQSVVSGLMQVQLETEVPVFSVSLTPHHFHAGEEHQKFFFEHFVHKGQEAAKTCADTLQKVRALR
RTEPRAVAV
>Mature_169_residues
MQPTAIDSKSKHTHGERVAFIQACWHKEIVDQSRKGFLAEMIAQGYQESDIDFFEVGGAFEMPLHAKLLAKTGRYAGIVA
AALVVDGGIYRHEFVAQSVVSGLMQVQLETEVPVFSVSLTPHHFHAGEEHQKFFFEHFVHKGQEAAKTCADTLQKVRALR
RTEPRAVAV

Specific function: Riboflavin synthase is a bifunctional enzyme complex catalyzing the formation of riboflavin from 5-amino-6-(1'-D)- ribityl-amino-2,4(1H,3H)-pyrimidinedione and L-3,4-dihydrohy-2- butanone-4-phosphate via 6,7-dimethyl-8-lumazine. The beta subunit catalyzes

COG id: COG0054

COG function: function code H; Riboflavin synthase beta-chain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DMRL synthase family [H]

Homologues:

Organism=Escherichia coli, GI1786617, Length=149, Percent_Identity=30.8724832214765, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002180 [H]

Pfam domain/function: PF00885 DMRL_synthase [H]

EC number: =2.5.1.9 [H]

Molecular weight: Translated: 18845; Mature: 18845

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPTAIDSKSKHTHGERVAFIQACWHKEIVDQSRKGFLAEMIAQGYQESDIDFFEVGGAF
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEECCCEE
EMPLHAKLLAKTGRYAGIVAAALVVDGGIYRHEFVAQSVVSGLMQVQLETEVPVFSVSLT
CCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
PHHFHAGEEHQKFFFEHFVHKGQEAAKTCADTLQKVRALRRTEPRAVAV
CHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQPTAIDSKSKHTHGERVAFIQACWHKEIVDQSRKGFLAEMIAQGYQESDIDFFEVGGAF
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEECCCEE
EMPLHAKLLAKTGRYAGIVAAALVVDGGIYRHEFVAQSVVSGLMQVQLETEVPVFSVSLT
CCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
PHHFHAGEEHQKFFFEHFVHKGQEAAKTCADTLQKVRALRRTEPRAVAV
CHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12928499 [H]