| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is flgA [C]
Identifier: 77460475
GI number: 77460475
Start: 4800930
End: 4801628
Strand: Direct
Name: flgA [C]
Synonym: Pfl01_4254
Alternate gene names: 77460475
Gene position: 4800930-4801628 (Clockwise)
Preceding gene: 77460467
Following gene: 77460476
Centisome position: 74.57
GC content: 60.09
Gene sequence:
>699_bases ATGTCCGCCGTTTGCCTTTTTTTCGCTGGCAGCCCTGCCGGTGCTGATGCGGTTACCTTGCCTGACATGCTTATCGGCGT CACTCAGGGCTTTCTTGAATTCACCGTAGAAGACTATCTGGCTACCAGTCAAACGGAAGGCCGTTATGAAATCGAGGTCA ACCAGCTCGATCCACGCATGCGCATGCCTATGTGCGACAAGGAATTGACAGCGACACTGGAGAGTCCGGCACGTCCTTTG GGCCGTGTCACGGTGAAGGTCCGCTGCGAAGGCGCCTCCCCCTGGACGGTGTTCGTGCCCGCTCAAGTCCGCCTGTTTCG CGAGATTGTCACGACCACGCGGCCACTCAAACGCGCCGGCATCATCGAGCCGCAGGACGTGACCTTGCGCGAGCGCGACG TCAGCACGATCAACCAGGGTTTCCTGACGTCGGTGGATGAAGCCATCGGACAGAAATTGACCCGACCAACGGTCGCCGAT CAAGTCATCACCCTGGTGCATCTGGAACAGGCGGAAGTGGTTCGCAAGGGCGATCAGGTGGTGATCACCGCCCGCAGCGG TACCCTCGCCGTGCGGATGCCGGGCGAAGCGCTGGCCAACGGCGGCCTGAAAGAACAGATTCGGGTGAAAAACCTCAACT CCCAACGGGTCATCAAGGCGCAGGTTGTGGCGCCCGGCCAGGTGGAAGTAGCGATGTAA
Upstream 100 bases:
>100_bases CATTGCTAAACGGCACGGCGCTTGCTTTTTAACTCGTATGAACGCTCAAACGACATTTTTCCGACGCCTGACATCTCCCC TCCGCAGAGGGCTTTGCGCG
Downstream 100 bases:
>100_bases GCGGCGAGTGAGCGGCAGAATGAACGGATATTTGAAAAGCCCCTGAGTACTCAAGCAGAAAACTGGCGCTGACCAGAGCT GTTCCCTAAACTGTGCCGCA
Product: flagellar basal body P-ring biosynthesis protein FlgA
Products: NA
Alternate protein names: Flagella Basal Body P-Ring Formation Protein FlgA; Flageller Protein FlgA; SAF Domain-Containing Protein; Flagellar Basal Body P-Ring Biosynthesis Protein; Flagellar Basal-Body P-Ring Formation Protein FlgA; Flagellar Protein; Chaperon For Flagellar Basal Body P-Ring Formation; Lateral Flagellar P-Ring Addition Protein; Basal-Body Periplasmic P Ring Assembly Protein; Flagellar Basal Body P-Ring Biosynthesis Protein-Like; Flagella Basal Body P-Ring Formation Protein Flga; SAF Domain Protein
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MSAVCLFFAGSPAGADAVTLPDMLIGVTQGFLEFTVEDYLATSQTEGRYEIEVNQLDPRMRMPMCDKELTATLESPARPL GRVTVKVRCEGASPWTVFVPAQVRLFREIVTTTRPLKRAGIIEPQDVTLRERDVSTINQGFLTSVDEAIGQKLTRPTVAD QVITLVHLEQAEVVRKGDQVVITARSGTLAVRMPGEALANGGLKEQIRVKNLNSQRVIKAQVVAPGQVEVAM
Sequences:
>Translated_232_residues MSAVCLFFAGSPAGADAVTLPDMLIGVTQGFLEFTVEDYLATSQTEGRYEIEVNQLDPRMRMPMCDKELTATLESPARPL GRVTVKVRCEGASPWTVFVPAQVRLFREIVTTTRPLKRAGIIEPQDVTLRERDVSTINQGFLTSVDEAIGQKLTRPTVAD QVITLVHLEQAEVVRKGDQVVITARSGTLAVRMPGEALANGGLKEQIRVKNLNSQRVIKAQVVAPGQVEVAM >Mature_231_residues SAVCLFFAGSPAGADAVTLPDMLIGVTQGFLEFTVEDYLATSQTEGRYEIEVNQLDPRMRMPMCDKELTATLESPARPLG RVTVKVRCEGASPWTVFVPAQVRLFREIVTTTRPLKRAGIIEPQDVTLRERDVSTINQGFLTSVDEAIGQKLTRPTVADQ VITLVHLEQAEVVRKGDQVVITARSGTLAVRMPGEALANGGLKEQIRVKNLNSQRVIKAQVVAPGQVEVAM
Specific function: Involved In The Assembly Process Of The P-Ring Formation. It May Associate With Flgf On The Rod Constituting A Structure Essential For The P-Ring Assembly Or May Act As A Modulator Protein For The P-Ring Assembly. [C]
COG id: COG1261
COG function: function code NO; Flagellar basal body P-ring biosynthesis protein
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25330; Mature: 25198
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVCLFFAGSPAGADAVTLPDMLIGVTQGFLEFTVEDYLATSQTEGRYEIEVNQLDPRM CCEEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC RMPMCDKELTATLESPARPLGRVTVKVRCEGASPWTVFVPAQVRLFREIVTTTRPLKRAG CCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEECHHHHHHHHHHHCCCCHHHCC IIEPQDVTLRERDVSTINQGFLTSVDEAIGQKLTRPTVADQVITLVHLEQAEVVRKGDQV CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEE VITARSGTLAVRMPGEALANGGLKEQIRVKNLNSQRVIKAQVVAPGQVEVAM EEEECCCEEEEEECCHHHHCCCCHHEEEEECCCCCEEEEEEEECCCEEEEEC >Mature Secondary Structure SAVCLFFAGSPAGADAVTLPDMLIGVTQGFLEFTVEDYLATSQTEGRYEIEVNQLDPRM CEEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC RMPMCDKELTATLESPARPLGRVTVKVRCEGASPWTVFVPAQVRLFREIVTTTRPLKRAG CCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEECHHHHHHHHHHHCCCCHHHCC IIEPQDVTLRERDVSTINQGFLTSVDEAIGQKLTRPTVADQVITLVHLEQAEVVRKGDQV CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEE VITARSGTLAVRMPGEALANGGLKEQIRVKNLNSQRVIKAQVVAPGQVEVAM EEEECCCEEEEEECCHHHHCCCCHHEEEEECCCCCEEEEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA