| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is wrbA [H]
Identifier: 77460450
GI number: 77460450
Start: 4771790
End: 4772386
Strand: Direct
Name: wrbA [H]
Synonym: Pfl01_4229
Alternate gene names: 77460450
Gene position: 4771790-4772386 (Clockwise)
Preceding gene: 77460449
Following gene: 77460451
Centisome position: 74.11
GC content: 67.84
Gene sequence:
>597_bases GTGAGTGCGCCGTACATTCTGGTTCTGTATTACAGCCGCAGCGGCTCGACCAACGAGATGGCCCGGCAGATTGCCCGTGG CGTCGAGCAGGCCGGCCTCGAAGCGCGCCTGCGCACCGTGCCGGCGATCTCCACCGAGTGCGAAGCCGTGGCGCCGGACA TTCCGGATGAAGGCGCGCTGTACGCCACATTGGATGACCTGAAGAACTGCGCCGGCCTGGCCCTCGGCAGCCCGACCCGT TTCGGCAACATGGCCGCGCCGCTCAAGTACTTCCTCGACGGCACCAGCAACCTGTGGCTGACCGGCGCGCTGGTCGGCAA ACCGGCCGGGGTGTTCACCTCCACCGCCAGCCTGCACGGCGGTCAGGAAACCACCCTGCTGTCAATGATGCTGCCGCTGC TGCACCACGGCATGCTGATCACCGGCCTGCCTTACAGCGAGTCGGCGCTGCTGGAAACCCAGGGCGGCGGCACGCCGTAC GGCGCCAGCCATCACGCCGGGGCCGACGGCAAAAGCGGCCTCGATCAGCACGAAGTGGCGCTGTGCCGAGCCCTCGGTGC ACGCCTGGCCAATACGGCCCGGAAACTGGGGAACTGA
Upstream 100 bases:
>100_bases CGATCGCGGCCCATCCAAAGCTGATGGAGCGACCGATTCTCGAAGCCGGCGACAAAGCCGTCATCGGCCGTCCACCGGAG CAGATCCTGGAGCTGCTGCC
Downstream 100 bases:
>100_bases GATGGCCAGAAAGCCGAAAGTCCTGCCCGCCGTCGAGTGGCTGGAACCACGAGTGCGGGCGATGCGGGTGATCAGTCTGC TGTGCTTTTTCGGCCTGGCC
Product: flavodoxin/nitric oxide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MSAPYILVLYYSRSGSTNEMARQIARGVEQAGLEARLRTVPAISTECEAVAPDIPDEGALYATLDDLKNCAGLALGSPTR FGNMAAPLKYFLDGTSNLWLTGALVGKPAGVFTSTASLHGGQETTLLSMMLPLLHHGMLITGLPYSESALLETQGGGTPY GASHHAGADGKSGLDQHEVALCRALGARLANTARKLGN
Sequences:
>Translated_198_residues MSAPYILVLYYSRSGSTNEMARQIARGVEQAGLEARLRTVPAISTECEAVAPDIPDEGALYATLDDLKNCAGLALGSPTR FGNMAAPLKYFLDGTSNLWLTGALVGKPAGVFTSTASLHGGQETTLLSMMLPLLHHGMLITGLPYSESALLETQGGGTPY GASHHAGADGKSGLDQHEVALCRALGARLANTARKLGN >Mature_197_residues SAPYILVLYYSRSGSTNEMARQIARGVEQAGLEARLRTVPAISTECEAVAPDIPDEGALYATLDDLKNCAGLALGSPTRF GNMAAPLKYFLDGTSNLWLTGALVGKPAGVFTSTASLHGGQETTLLSMMLPLLHHGMLITGLPYSESALLETQGGGTPYG ASHHAGADGKSGLDQHEVALCRALGARLANTARKLGN
Specific function: Seems To Enhance The Formation And/Or Stability Of Noncovalent Complexes Between The Trp Repressor Protein And Operator-Bearing DNA. However, Wrba Does Not Specifically Influence The Affinity Or Mode Of Binding Of Trpr To Its Operator. It Seems Possible T
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
Organism=Escherichia coli, GI1787239, Length=200, Percent_Identity=39.5, Blast_Score=124, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6319849, Length=198, Percent_Identity=35.8585858585859, Blast_Score=104, Evalue=8e-24, Organism=Saccharomyces cerevisiae, GI6320235, Length=198, Percent_Identity=32.8282828282828, Blast_Score=91, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6319526, Length=183, Percent_Identity=32.7868852459016, Blast_Score=76, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008254 - InterPro: IPR010089 - InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 20642; Mature: 20511
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPYILVLYYSRSGSTNEMARQIARGVEQAGLEARLRTVPAISTECEAVAPDIPDEGAL CCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCHHCCCCCCCCCCE YATLDDLKNCAGLALGSPTRFGNMAAPLKYFLDGTSNLWLTGALVGKPAGVFTSTASLHG EEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCEECCHHCCC GQETTLLSMMLPLLHHGMLITGLPYSESALLETQGGGTPYGASHHAGADGKSGLDQHEVA CCHHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH LCRALGARLANTARKLGN HHHHHHHHHHHHHHHHCC >Mature Secondary Structure SAPYILVLYYSRSGSTNEMARQIARGVEQAGLEARLRTVPAISTECEAVAPDIPDEGAL CCCEEEEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCHHCCCCCCCCCCE YATLDDLKNCAGLALGSPTRFGNMAAPLKYFLDGTSNLWLTGALVGKPAGVFTSTASLHG EEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCEECCHHCCC GQETTLLSMMLPLLHHGMLITGLPYSESALLETQGGGTPYGASHHAGADGKSGLDQHEVA CCHHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH LCRALGARLANTARKLGN HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA