| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yaiL [H]
Identifier: 77460436
GI number: 77460436
Start: 4756998
End: 4757540
Strand: Reverse
Name: yaiL [H]
Synonym: Pfl01_4215
Alternate gene names: 77460436
Gene position: 4757540-4756998 (Counterclockwise)
Preceding gene: 77460437
Following gene: 77460429
Centisome position: 73.89
GC content: 58.93
Gene sequence:
>543_bases ATGAGCCTTTCCCTTCGCGACCAGTTGCTCAAAGCAGGGCTGGTCAACCAAAAGCAGGCCAAGCAGGTCAGCAAAGACAA ACAGAAACAACAGCGTCTGGCCCACAAAGGCCAGATCGAACTGGATGACTCCCAGCAGCGCGCCGCCCAAGAAGCCATGG CCGAGAAGGTCAAGCGCGATCAGGAGCTGAACCGTCAGCAGCAGGAGAAGGCCGAGGCCAAGGCCCGCGCTGCGCAGGTC AAGCAGTTGATCGAAGTCTCGCGTCTGCCGAAGCTGACGACCGAGGACTACTACAACTTCGTCGACGACAAGAAGGTCAA GCGCATCTCCGTCAACACGCTGATGCGCAACAAGCTCAGCAGCGGCTCGCTGGCGATCGTGCACCATGCCGGCGGCTACG AAGTGATTCCTCGTGAGGCGGCCCTGAAGATCCAGGAGCGCGATCCACAGCGCATCGTGCAGCTCAACGAGAAGGTTGAA GAGGTCAATGCCGAGGACGATCCGTACGCGGCCTATGTGATCCCTGATGATCTGATGTGGTAA
Upstream 100 bases:
>100_bases GCACCCTCGAAGAGTTGGACGCCCTGTGGGGCGAAGCCAAACGTCAGGAAAAGAATTTGCCCAGCTGCGGCTGAGCCGTT GCCCAAGTGAGTAAGCATCA
Downstream 100 bases:
>100_bases TCGGGTCTCGTCTGGCTGCGAAGCGGCCCTGAAGCACCCAACAACGACAAACCCCGCTCATGGCGGGGTTTGTCGTTTTC AATGCTGTGGTTTTGCTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MSLSLRDQLLKAGLVNQKQAKQVSKDKQKQQRLAHKGQIELDDSQQRAAQEAMAEKVKRDQELNRQQQEKAEAKARAAQV KQLIEVSRLPKLTTEDYYNFVDDKKVKRISVNTLMRNKLSSGSLAIVHHAGGYEVIPREAALKIQERDPQRIVQLNEKVE EVNAEDDPYAAYVIPDDLMW
Sequences:
>Translated_180_residues MSLSLRDQLLKAGLVNQKQAKQVSKDKQKQQRLAHKGQIELDDSQQRAAQEAMAEKVKRDQELNRQQQEKAEAKARAAQV KQLIEVSRLPKLTTEDYYNFVDDKKVKRISVNTLMRNKLSSGSLAIVHHAGGYEVIPREAALKIQERDPQRIVQLNEKVE EVNAEDDPYAAYVIPDDLMW >Mature_179_residues SLSLRDQLLKAGLVNQKQAKQVSKDKQKQQRLAHKGQIELDDSQQRAAQEAMAEKVKRDQELNRQQQEKAEAKARAAQVK QLIEVSRLPKLTTEDYYNFVDDKKVKRISVNTLMRNKLSSGSLAIVHHAGGYEVIPREAALKIQERDPQRIVQLNEKVEE VNAEDDPYAAYVIPDDLMW
Specific function: Unknown
COG id: COG3122
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081724, Length=184, Percent_Identity=38.5869565217391, Blast_Score=110, Evalue=4e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018636 [H]
Pfam domain/function: PF09831 DUF2058 [H]
EC number: NA
Molecular weight: Translated: 20633; Mature: 20502
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSLRDQLLKAGLVNQKQAKQVSKDKQKQQRLAHKGQIELDDSQQRAAQEAMAEKVKRD CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH QELNRQQQEKAEAKARAAQVKQLIEVSRLPKLTTEDYYNFVDDKKVKRISVNTLMRNKLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCC SGSLAIVHHAGGYEVIPREAALKIQERDPQRIVQLNEKVEEVNAEDDPYAAYVIPDDLMW CCCEEEEEECCCCEECCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC >Mature Secondary Structure SLSLRDQLLKAGLVNQKQAKQVSKDKQKQQRLAHKGQIELDDSQQRAAQEAMAEKVKRD CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH QELNRQQQEKAEAKARAAQVKQLIEVSRLPKLTTEDYYNFVDDKKVKRISVNTLMRNKLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCC SGSLAIVHHAGGYEVIPREAALKIQERDPQRIVQLNEKVEEVNAEDDPYAAYVIPDDLMW CCCEEEEEECCCCEECCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]