| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is iorB [H]
Identifier: 77460390
GI number: 77460390
Start: 4706684
End: 4709005
Strand: Reverse
Name: iorB [H]
Synonym: Pfl01_4169
Alternate gene names: 77460390
Gene position: 4709005-4706684 (Counterclockwise)
Preceding gene: 77460391
Following gene: 77460389
Centisome position: 73.14
GC content: 63.57
Gene sequence:
>2322_bases ATGAGCCGTCTACCGAACGATTTCGCCCTGAGCAACCTGAGCCGTCGGGGCTTCCTCAAGGGCGTCGGCGCCACCGGGGC GTTGGTGCTGGCGGCGAGCTGGGGCTGGCAGGGTGCGCTGGCCGAAGACAAACCGAAGCAGTTCGGCGCCGACGGCATGC CCAACGGCTGGATCGACGATCCGAAGGTCTACGTCAGCATTGCCGCCGACGGCACGGTGACCGTGGTCTGTAACCGTTCG GAAATGGGCCAGGGCGTGCGCACCAGCCTGACCATGGTGATTGCCGATGAGCTGGAAGCCGACTGGGCGCACGTCAAGGT TCAGCAGGCGCCGGGTGATGAAGTGCGCTTCGGCAACCAGGACACTGACGGCTCGCGCAGCATGCGTCACTGGTACGAAC CGATGCGCCGTTGCGGCGCCGCCGCCCGGATCATGCTGGAACAAGCGGCCGCCGCCCAGTGGAAGGTGCCGGTCGGCGAA TGCCGCGCGCAACTGCATAAAGTCATTCACACACCGTCCGGACGCGAGCTGGGTTACGGTGAGCTGGCCGCTGCGGCCAG TGCGCTGACGGTGCCGGCCCGTGACAGCCTGCGGCTCAAGCAGCCGTCGGAATTCCGCTATATCGGCAAGCAAGGTACCA AAGCCATCGACGGTGCCGACATCGTCAATGGTCGCGCGGTTTACGGGGCTGACGTGCATTTCGACGGCATGCTGTTTGCG GTGATTGCGCGTCCGGCGGTGTACGGTGGCAAGGTCAAATCGGTGGACGACAGCGCCGCGCTGAAAGTGCCGGGCGTCCT CAAAGTCATCCAGATCGAGCCTCGGCCATTGCCTTCCGAATTCCAGCCGTTAGGCGGCGTGGCCGTGGTGGCCAGCAACA CCTGGGCGGCATTGAAGGGCCGTGAAGCGCTGAAGATCGAGTGGGACGATGGCCCGAACGCCACTTATGACTCGGTCGCC TATCGCAAAGAGATCGAAGCCGCTTCGCTGAAACCGGGCAAAGTGGTGCGCAATACCGGCGACATCGACAAGGCCATCGG CAGCGCCGCCAGCACGCTGGAAGCCTCTTATTACTTGCCGCATCTGGCCCAGGCACCGATGGAGCCGATGGTCGCCATCG CCCGTTACAAGGATGACACCTGCGAGGCCTGGGCACCGAGCCAGGCGCCGCAGGTCACCCGCGAGCGGATCGCCGAACGC CTGGGGCTGCCGTTCGATAACGTCACCTTCAATGTCACGCTGTTGGGCGGTGGTTTCGGGCGCAAGTCCAAACCGGACTT CGTCGTTGAAGCGGCCGTGCTCGCCAAGGAATTCCCTGGCAAGGCAGTGCGCGTGCAATGGACCCGGGAAGACGATATCC ACAACTCGTATTTCCACACTGTGTCCGCCGAATACCTCAAGGCCGGCGTCGGCAAGGACGGCTTGCCGTCTGCCTGGTTG CACCGCACGGTGGCGCCGAGCATCACCGCGCTGTTTGCGCCGGGCATGAACCACGAGGCCGCATTCGAACTGGGCATGGG CTTTACCAACATGGCCTACGCGATTCCCAACGTGCGCCTGGAAAACCCTGAAGCCACGGTTCATACGCGGGTGGGCTGGT ATCGCTCGGTGTCGAATATTCCCCATGGTTTTGCGATCCAGAGTTTCGTCGATGAACTGGCGCACAAAGCCAAGGAAGAT CCGCTCAAGTACCAGATCAAATTGCTCGGCCCGGATCGGCAGATCGACCCACGCACGCTCAGTGAAGAATGGAATTACGG CGAATCCCCCGAGCGTTATCCGATCGACACCGGGCGCATGCGCACCGTGCTGGAAACGGCAGCCAAGGCGGCGGGTTGGG GTCGTCAACTGCCCAAGGGTCGTGGTCTCGGATTGGCCGTGCATTACAGCTTCGTCACCTACGTGGCGGCGGTGATCGAA GTCGAGGTCAAGGACGACGGCACGCTGATCGTGCACAAGGCCGATATCGCCGTGGATTGCGGCCCGCAGATCAACCCCGA GCGCATCCGTTCGCAGTTCGAAGGCGCTTGTGTGATGGGCCTGGGCAACGCCGTGTGGGGCGAAATCAGCTTCAAGGACG GCAAGGTGCAGCAAGACAACTTCCATATGTATGAAGTGGCGCGCATGTCGCTGGCGCCGAAGGAAGTTGCGGTGCATCTG GTGACGCCGCCGGGCGAGGTGCCGTTGGGCGGTGTCGGTGAGCCGGGCGTGCCGCCGATTGCGCCGGCGCTGTGCAACGC GATCTTCGCCGCCACCGGTCAGCGCATTCGCAACCTGCCGGTGCGCTACCAGTTGCAGGGCTGGCAAAAGGCGCAAGCGT GA
Upstream 100 bases:
>100_bases TCGAAGAAGCGATGGTCGGCAACATCTGCCGCTGCGGCACCTACAACCGGATCAAGACCGCGATCCGTCAGGCATCCACT CACCTGAAGGAGGCCAAGGC
Downstream 100 bases:
>100_bases TGGACAGCGCCGATCTGAATGTCCTGCGCAGTGTGCTCGAATGGCGTCGCGCCGGGCAGCGAGTGATGTTGTTCAGCGTG GTGCAGACCTGGGGCACCGC
Product: twin-arginine translocation pathway signal protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 773; Mature: 772
Protein sequence:
>773_residues MSRLPNDFALSNLSRRGFLKGVGATGALVLAASWGWQGALAEDKPKQFGADGMPNGWIDDPKVYVSIAADGTVTVVCNRS EMGQGVRTSLTMVIADELEADWAHVKVQQAPGDEVRFGNQDTDGSRSMRHWYEPMRRCGAAARIMLEQAAAAQWKVPVGE CRAQLHKVIHTPSGRELGYGELAAAASALTVPARDSLRLKQPSEFRYIGKQGTKAIDGADIVNGRAVYGADVHFDGMLFA VIARPAVYGGKVKSVDDSAALKVPGVLKVIQIEPRPLPSEFQPLGGVAVVASNTWAALKGREALKIEWDDGPNATYDSVA YRKEIEAASLKPGKVVRNTGDIDKAIGSAASTLEASYYLPHLAQAPMEPMVAIARYKDDTCEAWAPSQAPQVTRERIAER LGLPFDNVTFNVTLLGGGFGRKSKPDFVVEAAVLAKEFPGKAVRVQWTREDDIHNSYFHTVSAEYLKAGVGKDGLPSAWL HRTVAPSITALFAPGMNHEAAFELGMGFTNMAYAIPNVRLENPEATVHTRVGWYRSVSNIPHGFAIQSFVDELAHKAKED PLKYQIKLLGPDRQIDPRTLSEEWNYGESPERYPIDTGRMRTVLETAAKAAGWGRQLPKGRGLGLAVHYSFVTYVAAVIE VEVKDDGTLIVHKADIAVDCGPQINPERIRSQFEGACVMGLGNAVWGEISFKDGKVQQDNFHMYEVARMSLAPKEVAVHL VTPPGEVPLGGVGEPGVPPIAPALCNAIFAATGQRIRNLPVRYQLQGWQKAQA
Sequences:
>Translated_773_residues MSRLPNDFALSNLSRRGFLKGVGATGALVLAASWGWQGALAEDKPKQFGADGMPNGWIDDPKVYVSIAADGTVTVVCNRS EMGQGVRTSLTMVIADELEADWAHVKVQQAPGDEVRFGNQDTDGSRSMRHWYEPMRRCGAAARIMLEQAAAAQWKVPVGE CRAQLHKVIHTPSGRELGYGELAAAASALTVPARDSLRLKQPSEFRYIGKQGTKAIDGADIVNGRAVYGADVHFDGMLFA VIARPAVYGGKVKSVDDSAALKVPGVLKVIQIEPRPLPSEFQPLGGVAVVASNTWAALKGREALKIEWDDGPNATYDSVA YRKEIEAASLKPGKVVRNTGDIDKAIGSAASTLEASYYLPHLAQAPMEPMVAIARYKDDTCEAWAPSQAPQVTRERIAER LGLPFDNVTFNVTLLGGGFGRKSKPDFVVEAAVLAKEFPGKAVRVQWTREDDIHNSYFHTVSAEYLKAGVGKDGLPSAWL HRTVAPSITALFAPGMNHEAAFELGMGFTNMAYAIPNVRLENPEATVHTRVGWYRSVSNIPHGFAIQSFVDELAHKAKED PLKYQIKLLGPDRQIDPRTLSEEWNYGESPERYPIDTGRMRTVLETAAKAAGWGRQLPKGRGLGLAVHYSFVTYVAAVIE VEVKDDGTLIVHKADIAVDCGPQINPERIRSQFEGACVMGLGNAVWGEISFKDGKVQQDNFHMYEVARMSLAPKEVAVHL VTPPGEVPLGGVGEPGVPPIAPALCNAIFAATGQRIRNLPVRYQLQGWQKAQA >Mature_772_residues SRLPNDFALSNLSRRGFLKGVGATGALVLAASWGWQGALAEDKPKQFGADGMPNGWIDDPKVYVSIAADGTVTVVCNRSE MGQGVRTSLTMVIADELEADWAHVKVQQAPGDEVRFGNQDTDGSRSMRHWYEPMRRCGAAARIMLEQAAAAQWKVPVGEC RAQLHKVIHTPSGRELGYGELAAAASALTVPARDSLRLKQPSEFRYIGKQGTKAIDGADIVNGRAVYGADVHFDGMLFAV IARPAVYGGKVKSVDDSAALKVPGVLKVIQIEPRPLPSEFQPLGGVAVVASNTWAALKGREALKIEWDDGPNATYDSVAY RKEIEAASLKPGKVVRNTGDIDKAIGSAASTLEASYYLPHLAQAPMEPMVAIARYKDDTCEAWAPSQAPQVTRERIAERL GLPFDNVTFNVTLLGGGFGRKSKPDFVVEAAVLAKEFPGKAVRVQWTREDDIHNSYFHTVSAEYLKAGVGKDGLPSAWLH RTVAPSITALFAPGMNHEAAFELGMGFTNMAYAIPNVRLENPEATVHTRVGWYRSVSNIPHGFAIQSFVDELAHKAKEDP LKYQIKLLGPDRQIDPRTLSEEWNYGESPERYPIDTGRMRTVLETAAKAAGWGRQLPKGRGLGLAVHYSFVTYVAAVIEV EVKDDGTLIVHKADIAVDCGPQINPERIRSQFEGACVMGLGNAVWGEISFKDGKVQQDNFHMYEVARMSLAPKEVAVHLV TPPGEVPLGGVGEPGVPPIAPALCNAIFAATGQRIRNLPVRYQLQGWQKAQA
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789230, Length=409, Percent_Identity=24.4498777506112, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI1786478, Length=394, Percent_Identity=25.6345177664975, Blast_Score=69, Evalue=9e-13, Organism=Escherichia coli, GI1789246, Length=536, Percent_Identity=23.3208955223881, Blast_Score=68, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 83843; Mature: 83712
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLPNDFALSNLSRRGFLKGVGATGALVLAASWGWQGALAEDKPKQFGADGMPNGWIDD CCCCCCHHHHHHHHHCCCEECCCCCCEEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCC PKVYVSIAADGTVTVVCNRSEMGQGVRTSLTMVIADELEADWAHVKVQQAPGDEVRFGNQ CEEEEEEECCCEEEEEECCHHHCCCHHHEEEEEEECCCCCCEEEEEEECCCCCCCCCCCC DTDGSRSMRHWYEPMRRCGAAARIMLEQAAAAQWKVPVGECRAQLHKVIHTPSGRELGYG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCH ELAAAASALTVPARDSLRLKQPSEFRYIGKQGTKAIDGADIVNGRAVYGADVHFDGMLFA HHHHHHHHEECCCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCEEEECCCCCCCHHHH VIARPAVYGGKVKSVDDSAALKVPGVLKVIQIEPRPLPSEFQPLGGVAVVASNTWAALKG HHHCCHHCCCEECCCCCCCEEECCCEEEEEEECCCCCCCCCCCCCCEEEEECCCEEEECC REALKIEWDDGPNATYDSVAYRKEIEAASLKPGKVVRNTGDIDKAIGSAASTLEASYYLP CEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCC HLAQAPMEPMVAIARYKDDTCEAWAPSQAPQVTRERIAERLGLPFDNVTFNVTLLGGGFG HHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCC RKSKPDFVVEAAVLAKEFPGKAVRVQWTREDDIHNSYFHTVSAEYLKAGVGKDGLPSAWL CCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHH HRTVAPSITALFAPGMNHEAAFELGMGFTNMAYAIPNVRLENPEATVHTRVGWYRSVSNI HHHHCCCHHHEECCCCCCCHHHHHCCCHHHHHEECCCCEECCCCCEEEEEHHHHHHHHCC PHGFAIQSFVDELAHKAKEDPLKYQIKLLGPDRQIDPRTLSEEWNYGESPERYPIDTGRM CCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCHHH RTVLETAAKAAGWGRQLPKGRGLGLAVHYSFVTYVAAVIEVEVKDDGTLIVHKADIAVDC HHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHEEEEECCCCEEEEEECCEEEEC GPQINPERIRSQFEGACVMGLGNAVWGEISFKDGKVQQDNFHMYEVARMSLAPKEVAVHL CCCCCHHHHHHHHCCEEEEECCCCEEEEEEECCCCEECCCCCHHHHHHHHCCCCCEEEEE VTPPGEVPLGGVGEPGVPPIAPALCNAIFAATGQRIRNLPVRYQLQGWQKAQA ECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHCCCEEEEECCCCCCCC >Mature Secondary Structure SRLPNDFALSNLSRRGFLKGVGATGALVLAASWGWQGALAEDKPKQFGADGMPNGWIDD CCCCCHHHHHHHHHCCCEECCCCCCEEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCC PKVYVSIAADGTVTVVCNRSEMGQGVRTSLTMVIADELEADWAHVKVQQAPGDEVRFGNQ CEEEEEEECCCEEEEEECCHHHCCCHHHEEEEEEECCCCCCEEEEEEECCCCCCCCCCCC DTDGSRSMRHWYEPMRRCGAAARIMLEQAAAAQWKVPVGECRAQLHKVIHTPSGRELGYG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCH ELAAAASALTVPARDSLRLKQPSEFRYIGKQGTKAIDGADIVNGRAVYGADVHFDGMLFA HHHHHHHHEECCCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCEEEECCCCCCCHHHH VIARPAVYGGKVKSVDDSAALKVPGVLKVIQIEPRPLPSEFQPLGGVAVVASNTWAALKG HHHCCHHCCCEECCCCCCCEEECCCEEEEEEECCCCCCCCCCCCCCEEEEECCCEEEECC REALKIEWDDGPNATYDSVAYRKEIEAASLKPGKVVRNTGDIDKAIGSAASTLEASYYLP CEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCC HLAQAPMEPMVAIARYKDDTCEAWAPSQAPQVTRERIAERLGLPFDNVTFNVTLLGGGFG HHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCC RKSKPDFVVEAAVLAKEFPGKAVRVQWTREDDIHNSYFHTVSAEYLKAGVGKDGLPSAWL CCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHH HRTVAPSITALFAPGMNHEAAFELGMGFTNMAYAIPNVRLENPEATVHTRVGWYRSVSNI HHHHCCCHHHEECCCCCCCHHHHHCCCHHHHHEECCCCEECCCCCEEEEEHHHHHHHHCC PHGFAIQSFVDELAHKAKEDPLKYQIKLLGPDRQIDPRTLSEEWNYGESPERYPIDTGRM CCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCHHH RTVLETAAKAAGWGRQLPKGRGLGLAVHYSFVTYVAAVIEVEVKDDGTLIVHKADIAVDC HHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHEEEEECCCCEEEEEECCEEEEC GPQINPERIRSQFEGACVMGLGNAVWGEISFKDGKVQQDNFHMYEVARMSLAPKEVAVHL CCCCCHHHHHHHHCCEEEEECCCCEEEEEEECCCCEECCCCCHHHHHHHHCCCCCEEEEE VTPPGEVPLGGVGEPGVPPIAPALCNAIFAATGQRIRNLPVRYQLQGWQKAQA ECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]