| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460366
Identifier: 77460366
GI number: 77460366
Start: 4684171
End: 4684731
Strand: Reverse
Name: 77460366
Synonym: Pfl01_4145
Alternate gene names: NA
Gene position: 4684731-4684171 (Counterclockwise)
Preceding gene: 77460367
Following gene: 77460365
Centisome position: 72.76
GC content: 58.82
Gene sequence:
>561_bases ATGAGTGGCCCGCAAAAAGCCAATGACCTGCTGGGGCAAATCCCCAAAACCAAAGGCTTGCCGCCGGTGCACTTGTGGAA CCCGGATTTCTGCGGCGACATCGACATGCGCATCGCCCGCGACGGCACCTGGTATTACCTGGGTACGCCGATCGGACGCA AGCCGATGGTCAAGCTGTTCTCCACCATCATCCGCCGCGACGGCGATGATTACTTTCTGATTACTCCAGTGGAGAAAGTC GGAATCAAGGTCGATGACGCGCCATTCGTGGCGATTGCCGTCGAGATGGAAGGCGAAGGTGAGGCGCAAGTGCTGCGCTT TACCACCAATGTCGATGAAACCACCGAGGCCGGCGCGGAACATTTGATCCGCGTCGAGATCGACCCGGTCACTCAAGAAC CTGCGCCTTACGTGCATGTGCGCACCAACCTCGAAGCGCTGATTCACCGCAACGTGTTCTACCAATTGGTCGAGCTGGCA GTCAGCCGTGAAATCGATGGGCAGCGTTGGCTCGGCGTCTGGAGCGGCGGCGAGTTCTTCCGCATCGGCCTCGAACCATA A
Upstream 100 bases:
>100_bases GTTCCACGACAACAAGCCCGAAGACCTGATCGGCCCACCGCTGGCGCAGTACGCGCGCAGCCTGTTGGGCGTCGGGGACC AGTAATTCAAGGAGTACGCC
Downstream 100 bases:
>100_bases AAACCGCAGTCTGTGAAAGCAGGCTGCGGTTTTTTGTCGTTGACTCTCAATCGTATGATGATTAGCGTAGGCACCCACAG CGAATCGCTTCGGGGTGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MSGPQKANDLLGQIPKTKGLPPVHLWNPDFCGDIDMRIARDGTWYYLGTPIGRKPMVKLFSTIIRRDGDDYFLITPVEKV GIKVDDAPFVAIAVEMEGEGEAQVLRFTTNVDETTEAGAEHLIRVEIDPVTQEPAPYVHVRTNLEALIHRNVFYQLVELA VSREIDGQRWLGVWSGGEFFRIGLEP
Sequences:
>Translated_186_residues MSGPQKANDLLGQIPKTKGLPPVHLWNPDFCGDIDMRIARDGTWYYLGTPIGRKPMVKLFSTIIRRDGDDYFLITPVEKV GIKVDDAPFVAIAVEMEGEGEAQVLRFTTNVDETTEAGAEHLIRVEIDPVTQEPAPYVHVRTNLEALIHRNVFYQLVELA VSREIDGQRWLGVWSGGEFFRIGLEP >Mature_185_residues SGPQKANDLLGQIPKTKGLPPVHLWNPDFCGDIDMRIARDGTWYYLGTPIGRKPMVKLFSTIIRRDGDDYFLITPVEKVG IKVDDAPFVAIAVEMEGEGEAQVLRFTTNVDETTEAGAEHLIRVEIDPVTQEPAPYVHVRTNLEALIHRNVFYQLVELAV SREIDGQRWLGVWSGGEFFRIGLEP
Specific function: Unknown
COG id: COG3816
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20918; Mature: 20787
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGPQKANDLLGQIPKTKGLPPVHLWNPDFCGDIDMRIARDGTWYYLGTPIGRKPMVKLF CCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEEECCCCEEEECCCCCCCHHHHHH STIIRRDGDDYFLITPVEKVGIKVDDAPFVAIAVEMEGEGEAQVLRFTTNVDETTEAGAE HHHHHCCCCCEEEEECHHHHCEEECCCCEEEEEEEECCCCCEEEEEEECCCCCHHHCCCC HLIRVEIDPVTQEPAPYVHVRTNLEALIHRNVFYQLVELAVSREIDGQRWLGVWSGGEFF EEEEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEE RIGLEP EEECCC >Mature Secondary Structure SGPQKANDLLGQIPKTKGLPPVHLWNPDFCGDIDMRIARDGTWYYLGTPIGRKPMVKLF CCCCHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEEECCCCEEEECCCCCCCHHHHHH STIIRRDGDDYFLITPVEKVGIKVDDAPFVAIAVEMEGEGEAQVLRFTTNVDETTEAGAE HHHHHCCCCCEEEEECHHHHCEEECCCCEEEEEEEECCCCCEEEEEEECCCCCHHHCCCC HLIRVEIDPVTQEPAPYVHVRTNLEALIHRNVFYQLVELAVSREIDGQRWLGVWSGGEFF EEEEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEE RIGLEP EEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA