Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77460306

Identifier: 77460306

GI number: 77460306

Start: 4616898

End: 4617692

Strand: Reverse

Name: 77460306

Synonym: Pfl01_4085

Alternate gene names: NA

Gene position: 4617692-4616898 (Counterclockwise)

Preceding gene: 77460307

Following gene: 77460300

Centisome position: 71.72

GC content: 60.0

Gene sequence:

>795_bases
GTGATCGACACATTCAACCGAACCGGACCACTCATGGAAGCTGCAAGTTATCCCGCCTGGGCGCAACAGTTGATCCAGGA
TTGCAGCGAGAGCAAACGCCGGGTTGTCGAACATGAACTTTATCTGCGCCTGCGTGATAACAAGCTCAGCGCCAAAACCA
TGCGCCAGTACCTGATCGGGGGCTGGCCCGTCGTTGAGCAATTCGCGTTGTACATGGCACAGAATCTCACCAAGACCAAA
TTTGCCCGCCACCCGGGTGAAGACATGGCGCGGCGCTGGTTGATGCGCAATATTCGCGTCGAACTCAACCACGCCGATTA
TTGGCTGCATTGGAGCCGGGCCCATGGGGTGAGCCTGGAAGATCTGCAGGCGCAGCAAGTACCACCGGAGTTGCACGCCC
TGAGCCACTGGTGCTGGCACACCAGTTCGGCGGATTCACTGATCGTGGCCATCGCAGCCACCAACTACGCCATCGAAGGC
GCGACCGGGGAGTGGTCGGCGCTGGTGTGTTCGACGGGGGTCTATGCTGCGGCCTTCCCTGAAGAGGACCGCAAGCGGGC
GATGAAGTGGCTGAAGATGCACGCCCAGTACGACGATGCCCATCCTTGGGAAGCGTTGGAGATCATCTGCACCCTGGCCG
GGATGAACCCGAGCAAAGCCTTGCAGGCGGAGCTGCGACAGGCCATCTGCAAGAGTTATGACTACATGTACCTGTTCCTC
GAGCGCTGCATGCAGCTCGAACTGTCGGAGCGGGTGATGGTCGGGCGTGAGCGTCGGGCACTGGTCGAGAGCTAG

Upstream 100 bases:

>100_bases
CGGCCCGCCAGACCGCAGCCGTTGTTATTCAAGGCGCCTGGCACGTTCCGTTGAAGTCTCTTGCCGATCCTTACAATCAC
AAATCAAAAGGAGCCGAACA

Downstream 100 bases:

>100_bases
TTTCGGCGACATCAATAAAAAAAACGGGAGCCCTGGCTCCCGTTTTTTGTTGGCAGCGAATATCTAGCCCGCCATGGTCA
GGCGATTGCGGCCCTCACGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MIDTFNRTGPLMEAASYPAWAQQLIQDCSESKRRVVEHELYLRLRDNKLSAKTMRQYLIGGWPVVEQFALYMAQNLTKTK
FARHPGEDMARRWLMRNIRVELNHADYWLHWSRAHGVSLEDLQAQQVPPELHALSHWCWHTSSADSLIVAIAATNYAIEG
ATGEWSALVCSTGVYAAAFPEEDRKRAMKWLKMHAQYDDAHPWEALEIICTLAGMNPSKALQAELRQAICKSYDYMYLFL
ERCMQLELSERVMVGRERRALVES

Sequences:

>Translated_264_residues
MIDTFNRTGPLMEAASYPAWAQQLIQDCSESKRRVVEHELYLRLRDNKLSAKTMRQYLIGGWPVVEQFALYMAQNLTKTK
FARHPGEDMARRWLMRNIRVELNHADYWLHWSRAHGVSLEDLQAQQVPPELHALSHWCWHTSSADSLIVAIAATNYAIEG
ATGEWSALVCSTGVYAAAFPEEDRKRAMKWLKMHAQYDDAHPWEALEIICTLAGMNPSKALQAELRQAICKSYDYMYLFL
ERCMQLELSERVMVGRERRALVES
>Mature_264_residues
MIDTFNRTGPLMEAASYPAWAQQLIQDCSESKRRVVEHELYLRLRDNKLSAKTMRQYLIGGWPVVEQFALYMAQNLTKTK
FARHPGEDMARRWLMRNIRVELNHADYWLHWSRAHGVSLEDLQAQQVPPELHALSHWCWHTSSADSLIVAIAATNYAIEG
ATGEWSALVCSTGVYAAAFPEEDRKRAMKWLKMHAQYDDAHPWEALEIICTLAGMNPSKALQAELRQAICKSYDYMYLFL
ERCMQLELSERVMVGRERRALVES

Specific function: Unknown

COG id: COG5424

COG function: function code H; Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30535; Mature: 30535

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDTFNRTGPLMEAASYPAWAQQLIQDCSESKRRVVEHELYLRLRDNKLSAKTMRQYLIG
CCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHC
GWPVVEQFALYMAQNLTKTKFARHPGEDMARRWLMRNIRVELNHADYWLHWSRAHGVSLE
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEECCEEEEEECCCCCCCHH
DLQAQQVPPELHALSHWCWHTSSADSLIVAIAATNYAIEGATGEWSALVCSTGVYAAAFP
HHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCEEEECCCCCCHHHEECCCCEEEECC
EEDRKRAMKWLKMHAQYDDAHPWEALEIICTLAGMNPSKALQAELRQAICKSYDYMYLFL
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHH
ERCMQLELSERVMVGRERRALVES
HHHHHHHHHHHHHHCHHHHHHCCC
>Mature Secondary Structure
MIDTFNRTGPLMEAASYPAWAQQLIQDCSESKRRVVEHELYLRLRDNKLSAKTMRQYLIG
CCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHC
GWPVVEQFALYMAQNLTKTKFARHPGEDMARRWLMRNIRVELNHADYWLHWSRAHGVSLE
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEECCEEEEEECCCCCCCHH
DLQAQQVPPELHALSHWCWHTSSADSLIVAIAATNYAIEGATGEWSALVCSTGVYAAAFP
HHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCEEEECCCCCCHHHEECCCCEEEECC
EEDRKRAMKWLKMHAQYDDAHPWEALEIICTLAGMNPSKALQAELRQAICKSYDYMYLFL
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHH
ERCMQLELSERVMVGRERRALVES
HHHHHHHHHHHHHHCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA