Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77460264

Identifier: 77460264

GI number: 77460264

Start: 4568406

End: 4569365

Strand: Reverse

Name: 77460264

Synonym: Pfl01_4043

Alternate gene names: NA

Gene position: 4569365-4568406 (Counterclockwise)

Preceding gene: 77460265

Following gene: 77460263

Centisome position: 70.97

GC content: 53.85

Gene sequence:

>960_bases
GTGCTTAAGGAAAAGGTTGCTCTCTCGGTTCTACTGGTTTCCTACAACCATGAAAACCATATCCGTCAGGCGTTGAATGC
CTTGTTCGGGCAGGTTTTCGACGGGCCGATAGAACTGGTGGTCGCGGATGACAAATCGACGGACAGTACGCTTTCCATCA
TCAGGGAATATGAAGGAATCGACAGTCGCTTTACATTCAAGTATCTGGATTACAGCGAAAACCTCGGTATTACCAAAAAC
TATAAACGCGGCTTCAATGCCTGTTCCAATGAATACGTGGCAGTGCTTGAAGGCGACGATTACTGGGTCAGTCCGCACAA
GTTGAGTCGCCAGGCAACATTCCTCTCGGAACATTGGGAATCCGACGTGTGCGGGGTCAACTACTTTGTCTACGAAGAAG
ACCGCGCCCAGCTTACCCCGCGGGTGCCTGTTTCCACCGGGCACCGGTTCATCACCGCCAGAGAGCTGATTGCCGACAAC
ATCATCGGCAATTTTTCCACGTGCATGTATCGCCGCTCGGCGTTTGCCAGGCTGCCGGATGCCTTGTTCGATATCAAATC
CTACGACTGGATCACCAATATCGTACTGGCACGCACCAGCGTGATCGGTTTTCTACAGGAGCCCATGTCTGTCTATCGTC
TGCACACCGCCGGCGTCTGGACGCAAACACCTCACGTGGAAAAGCTCAAGGCCCAGCTCGATGTGTTGCCTGCGTACGAT
GAACTGACCGACGGCGTGTTCCATGAGGACTTTGAACTGCTTGCCAGTCGTCTGCGCCACGTCATTACCGCGTCGCAGAT
CGGACACGTGGCCGAGACGGTCAGTCAGCCGGTCATTCGTGCCGTCCCGACGCTGCTCAACTTCATGCCGCCGATCCTGA
TTGTCGTGATCAAGGCGCTCATGCCTGTTGCGCTCAAAAATCTTATTGTCAGAGTTGTGAAGCGGAGTCGGTCGGTATGA

Upstream 100 bases:

>100_bases
ACGTTCCGTACCTACTGCACGGTCAAGGACCAACTGGTCATTGATGGTGAGGCGCAAATCTATGTTCCGAAGAAACCAGC
AGCTGCAGAGGGTTCGGTAA

Downstream 100 bases:

>100_bases
GTTCCCCTACAGTTTCCGTGATCATGGCGACCTATAATCACGCCCCTTTTGTGGCCGAGGCGATCCAGAGTGTCCTTGGG
CAGACCGGTGTGGATTTCGA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MLKEKVALSVLLVSYNHENHIRQALNALFGQVFDGPIELVVADDKSTDSTLSIIREYEGIDSRFTFKYLDYSENLGITKN
YKRGFNACSNEYVAVLEGDDYWVSPHKLSRQATFLSEHWESDVCGVNYFVYEEDRAQLTPRVPVSTGHRFITARELIADN
IIGNFSTCMYRRSAFARLPDALFDIKSYDWITNIVLARTSVIGFLQEPMSVYRLHTAGVWTQTPHVEKLKAQLDVLPAYD
ELTDGVFHEDFELLASRLRHVITASQIGHVAETVSQPVIRAVPTLLNFMPPILIVVIKALMPVALKNLIVRVVKRSRSV

Sequences:

>Translated_319_residues
MLKEKVALSVLLVSYNHENHIRQALNALFGQVFDGPIELVVADDKSTDSTLSIIREYEGIDSRFTFKYLDYSENLGITKN
YKRGFNACSNEYVAVLEGDDYWVSPHKLSRQATFLSEHWESDVCGVNYFVYEEDRAQLTPRVPVSTGHRFITARELIADN
IIGNFSTCMYRRSAFARLPDALFDIKSYDWITNIVLARTSVIGFLQEPMSVYRLHTAGVWTQTPHVEKLKAQLDVLPAYD
ELTDGVFHEDFELLASRLRHVITASQIGHVAETVSQPVIRAVPTLLNFMPPILIVVIKALMPVALKNLIVRVVKRSRSV
>Mature_319_residues
MLKEKVALSVLLVSYNHENHIRQALNALFGQVFDGPIELVVADDKSTDSTLSIIREYEGIDSRFTFKYLDYSENLGITKN
YKRGFNACSNEYVAVLEGDDYWVSPHKLSRQATFLSEHWESDVCGVNYFVYEEDRAQLTPRVPVSTGHRFITARELIADN
IIGNFSTCMYRRSAFARLPDALFDIKSYDWITNIVLARTSVIGFLQEPMSVYRLHTAGVWTQTPHVEKLKAQLDVLPAYD
ELTDGVFHEDFELLASRLRHVITASQIGHVAETVSQPVIRAVPTLLNFMPPILIVVIKALMPVALKNLIVRVVKRSRSV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 36224; Mature: 36224

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKEKVALSVLLVSYNHENHIRQALNALFGQVFDGPIELVVADDKSTDSTLSIIREYEGI
CCCHHHHHHHHEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCC
DSRFTFKYLDYSENLGITKNYKRGFNACSNEYVAVLEGDDYWVSPHKLSRQATFLSEHWE
CCEEEEEEECCCCCCCCCCHHHHHHCCCCCCEEEEEECCCEEECHHHHHHHHHHHHHHCC
SDVCGVNYFVYEEDRAQLTPRVPVSTGHRFITARELIADNIIGNFSTCMYRRSAFARLPD
CCCCCCEEEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCH
ALFDIKSYDWITNIVLARTSVIGFLQEPMSVYRLHTAGVWTQTPHVEKLKAQLDVLPAYD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHH
ELTDGVFHEDFELLASRLRHVITASQIGHVAETVSQPVIRAVPTLLNFMPPILIVVIKAL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MPVALKNLIVRVVKRSRSV
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKEKVALSVLLVSYNHENHIRQALNALFGQVFDGPIELVVADDKSTDSTLSIIREYEGI
CCCHHHHHHHHEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCC
DSRFTFKYLDYSENLGITKNYKRGFNACSNEYVAVLEGDDYWVSPHKLSRQATFLSEHWE
CCEEEEEEECCCCCCCCCCHHHHHHCCCCCCEEEEEECCCEEECHHHHHHHHHHHHHHCC
SDVCGVNYFVYEEDRAQLTPRVPVSTGHRFITARELIADNIIGNFSTCMYRRSAFARLPD
CCCCCCEEEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCH
ALFDIKSYDWITNIVLARTSVIGFLQEPMSVYRLHTAGVWTQTPHVEKLKAQLDVLPAYD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHH
ELTDGVFHEDFELLASRLRHVITASQIGHVAETVSQPVIRAVPTLLNFMPPILIVVIKAL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MPVALKNLIVRVVKRSRSV
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]