| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is lip2 [H]
Identifier: 77460219
GI number: 77460219
Start: 4526491
End: 4527504
Strand: Direct
Name: lip2 [H]
Synonym: Pfl01_3998
Alternate gene names: 77460219
Gene position: 4526491-4527504 (Clockwise)
Preceding gene: 77460218
Following gene: 77460222
Centisome position: 70.3
GC content: 61.93
Gene sequence:
>1014_bases ATGAACACTTTCAGCAAAGTCTTGACCGGTACCCTTCTCGCCCTGTCCATCCACAGCGCATTTGCCGGGGAGGTTGAACA CAACACTCAGGCGTTTCTCGATGTGCTGAATGCCGGCACCGGCAAACCGATGGAACAGCTGACACCCAAGGAGGCCCGCG CCGTGCTGACGGGCGCGCAGTCCGGGGTCAAACTGACGCTGCCCAAGGCGGACGTCAGCGAGAAAACCATCCAGGTCGAT GGCCAACCGTTGAGCCTGACCATCGTCCGGCCGGCCGGGGTCAAGGGCGAGCTGCCGGTGTTCATGTTCTTCCACGGCGG CGGCTGGGTGCTGGGGGATTTCCCGACTCACGAACGTCTGGTGCGGGATCTGGTGGTCGGCTCGGGTGCGGCGGCGGTGT TCGTCAATTACACCCCTTCACCGGAAGCGCATTACCCGGTGGCGATCAACCAGGCTTATGCCGCTACCAAATGGGTGGCC GAACACGGCAAAGAAATCAACGTCGACGGCAAGCGTCTGGCGGTGGCGGGCAACAGCGTCGGCGGCAACATGGCGGCAGT CGTCGCCTTGATGGCCAAAGACAAAGGCACTCCGGCGATCAAATTCCAGGTGCTGCTGTGGCCGGTGACCGATGCCAATT TCGACACTGGTTCGTATAACCAGTACGCCGAGGGGCACTTCCTCACTCGCAATATGATGAAGTGGTTCTGGGACAACTAC ACCACCGACGCCAACCAGCGGAACGAGATCTACGCCTCGCCGCTGCGGGCAACCACCGCGCAATTGAAAGGTCTGCCGCC CGCGCTGGTGCAGACTGCGGGGGCTGACGTGCTGCGTGACGAAGGTGAAGCCTACGCCCGCAAACTCGACGAAGCCGGGG TGCCGGTGACCTCGGTGCGCTACAACGGCATGATCCACGACTACGGTTTGCTCAACGTGGTCAGCCAGGTGCCGGCAGTG CGCTCGGCGATGCTGCAGGCCTCGGAAGAACTGAAGCAGCACCTGAAGAAGTAA
Upstream 100 bases:
>100_bases CCAGGTCTGCCCGTACTCCAACGCCACCCGTGGCAACGTCGATGTGCGTCTGCACGTCACCGTGTAATCACTGACGCTCA AGCCCGTACAGGAAATGAAC
Downstream 100 bases:
>100_bases TTTTCATCAGGCACAAAAAAGCCCGACTCGATGGTCGGGCTTTTTCTTTCCACAAAAAGCAGTGCTTATTTGGCACGGCC TTTGTAGGAACCGCCTTCGC
Product: esterase/lipase/thioesterase
Products: NA
Alternate protein names: Triacylglycerol lipase [H]
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MNTFSKVLTGTLLALSIHSAFAGEVEHNTQAFLDVLNAGTGKPMEQLTPKEARAVLTGAQSGVKLTLPKADVSEKTIQVD GQPLSLTIVRPAGVKGELPVFMFFHGGGWVLGDFPTHERLVRDLVVGSGAAAVFVNYTPSPEAHYPVAINQAYAATKWVA EHGKEINVDGKRLAVAGNSVGGNMAAVVALMAKDKGTPAIKFQVLLWPVTDANFDTGSYNQYAEGHFLTRNMMKWFWDNY TTDANQRNEIYASPLRATTAQLKGLPPALVQTAGADVLRDEGEAYARKLDEAGVPVTSVRYNGMIHDYGLLNVVSQVPAV RSAMLQASEELKQHLKK
Sequences:
>Translated_337_residues MNTFSKVLTGTLLALSIHSAFAGEVEHNTQAFLDVLNAGTGKPMEQLTPKEARAVLTGAQSGVKLTLPKADVSEKTIQVD GQPLSLTIVRPAGVKGELPVFMFFHGGGWVLGDFPTHERLVRDLVVGSGAAAVFVNYTPSPEAHYPVAINQAYAATKWVA EHGKEINVDGKRLAVAGNSVGGNMAAVVALMAKDKGTPAIKFQVLLWPVTDANFDTGSYNQYAEGHFLTRNMMKWFWDNY TTDANQRNEIYASPLRATTAQLKGLPPALVQTAGADVLRDEGEAYARKLDEAGVPVTSVRYNGMIHDYGLLNVVSQVPAV RSAMLQASEELKQHLKK >Mature_337_residues MNTFSKVLTGTLLALSIHSAFAGEVEHNTQAFLDVLNAGTGKPMEQLTPKEARAVLTGAQSGVKLTLPKADVSEKTIQVD GQPLSLTIVRPAGVKGELPVFMFFHGGGWVLGDFPTHERLVRDLVVGSGAAAVFVNYTPSPEAHYPVAINQAYAATKWVA EHGKEINVDGKRLAVAGNSVGGNMAAVVALMAKDKGTPAIKFQVLLWPVTDANFDTGSYNQYAEGHFLTRNMMKWFWDNY TTDANQRNEIYASPLRATTAQLKGLPPALVQTAGADVLRDEGEAYARKLDEAGVPVTSVRYNGMIHDYGLLNVVSQVPAV RSAMLQASEELKQHLKK
Specific function: Has An Esterase Activity. Triacetyl Glycerol (Triacetin) Is A Substrate Of The Enzyme. [C]
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Homo sapiens, GI68299767, Length=262, Percent_Identity=25.9541984732824, Blast_Score=83, Evalue=4e-16, Organism=Homo sapiens, GI157041239, Length=256, Percent_Identity=23.828125, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI21328446, Length=107, Percent_Identity=31.7757009345794, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI68051721, Length=269, Percent_Identity=26.0223048327138, Blast_Score=69, Evalue=9e-12, Organism=Escherichia coli, GI1786682, Length=220, Percent_Identity=27.7272727272727, Blast_Score=87, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17567059, Length=349, Percent_Identity=26.3610315186246, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI71996133, Length=124, Percent_Identity=31.4516129032258, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 - InterPro: IPR002168 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: =3.1.1.3 [H]
Molecular weight: Translated: 36361; Mature: 36361
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTFSKVLTGTLLALSIHSAFAGEVEHNTQAFLDVLNAGTGKPMEQLTPKEARAVLTGAQ CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHCCHHHHHHHHCCCC SGVKLTLPKADVSEKTIQVDGQPLSLTIVRPAGVKGELPVFMFFHGGGWVLGDFPTHERL CCEEEEECCCCCCCCEEEECCCEEEEEEECCCCCCCCCCEEEEEECCCEEECCCCCHHHH VRDLVVGSGAAAVFVNYTPSPEAHYPVAINQAYAATKWVAEHGKEINVDGKRLAVAGNSV HHHHHHCCCCEEEEEEECCCCCCCCCEEECCHHHHHHHHHHCCCEECCCCCEEEEECCCC GGNMAAVVALMAKDKGTPAIKFQVLLWPVTDANFDTGSYNQYAEGHFLTRNMMKWFWDNY CCHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC TTDANQRNEIYASPLRATTAQLKGLPPALVQTAGADVLRDEGEAYARKLDEAGVPVTSVR CCCCCCCCCEEECCHHHHHHHHCCCCHHHHHHCCCHHHHCCHHHHHHHHHHCCCCEEEEE YNGMIHDYGLLNVVSQVPAVRSAMLQASEELKQHLKK ECCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNTFSKVLTGTLLALSIHSAFAGEVEHNTQAFLDVLNAGTGKPMEQLTPKEARAVLTGAQ CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHCCHHHHHHHHCCCC SGVKLTLPKADVSEKTIQVDGQPLSLTIVRPAGVKGELPVFMFFHGGGWVLGDFPTHERL CCEEEEECCCCCCCCEEEECCCEEEEEEECCCCCCCCCCEEEEEECCCEEECCCCCHHHH VRDLVVGSGAAAVFVNYTPSPEAHYPVAINQAYAATKWVAEHGKEINVDGKRLAVAGNSV HHHHHHCCCCEEEEEEECCCCCCCCCEEECCHHHHHHHHHHCCCEECCCCCEEEEECCCC GGNMAAVVALMAKDKGTPAIKFQVLLWPVTDANFDTGSYNQYAEGHFLTRNMMKWFWDNY CCHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC TTDANQRNEIYASPLRATTAQLKGLPPALVQTAGADVLRDEGEAYARKLDEAGVPVTSVR CCCCCCCCCEEECCHHHHHHHHCCCCHHHHHHCCCHHHHCCHHHHHHHHHHCCCCEEEEE YNGMIHDYGLLNVVSQVPAVRSAMLQASEELKQHLKK ECCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1907455 [H]