Click here to switch to the map view.

The map label for this gene is ohrR [H]

Identifier: 77460201

GI number: 77460201

Start: 4510064

End: 4510525

Strand: Reverse

Name: ohrR [H]

Synonym: Pfl01_3980

Alternate gene names: 77460201

Gene position: 4510525-4510064 (Counterclockwise)

Preceding gene: 77460202

Following gene: 77460199

Centisome position: 70.06

GC content: 60.39

Gene sequence:

>462_bases
ATGAACAACCTGTCCGCCGATTCGCTGAAACTCGACAGTCAGCTGTGCTTCAAGTTGTACGCCGCATCGCGGGCGGTGAT
CCGTGCCTACAAACCGATGCTCGATCAGCTCGGCCTGACCTATCCGCAATATCTGGCAATGCTGGTGTTGTGGGAATGGC
AGCAAACTGCGCCGGAGCAACCGACAGTCAAGGCGCTGGGTGAGCGTCTGGCACTGGACTCCGGCACGCTGACGCCGCTG
CTCAAGCGATTGGAGCAACTGCAACTGGTTCAGCGTCAGCGCTCGGCCCGGGACGAGCGTGAAGTTCATCTGAGCCTTAC
GCGGCAAGGGCAGGCGCTGCGTGAACAGGTCGGGCCGTTGAAGGCGCGGCTGTTGTGCGACAGCGGGGTTGATCTGGACC
GGCTCAATGACTTGCGTAGCGGTCTTGATCACTTGCTGGGGCAGATCAAAGCACTGTCGTAG

Upstream 100 bases:

>100_bases
TCACCAAATTCCTGATCGGCAAGGACGGCCAGTTGGTCAAGCGCTTCGCCCCGGCCACCAAGCCGCAGGATCTGAGCCGT
GAGATCGAAGCCCTGCTCAA

Downstream 100 bases:

>100_bases
TCGGAATCCACTGGTCCAGCAGCGCCGCCAATTCTTCACGACGGAACGGCTTGGCCAGATAGTCGCTCATGCCCGCCGCC
CGGCAACGTTCGCGCTCCTC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MNNLSADSLKLDSQLCFKLYAASRAVIRAYKPMLDQLGLTYPQYLAMLVLWEWQQTAPEQPTVKALGERLALDSGTLTPL
LKRLEQLQLVQRQRSARDEREVHLSLTRQGQALREQVGPLKARLLCDSGVDLDRLNDLRSGLDHLLGQIKALS

Sequences:

>Translated_153_residues
MNNLSADSLKLDSQLCFKLYAASRAVIRAYKPMLDQLGLTYPQYLAMLVLWEWQQTAPEQPTVKALGERLALDSGTLTPL
LKRLEQLQLVQRQRSARDEREVHLSLTRQGQALREQVGPLKARLLCDSGVDLDRLNDLRSGLDHLLGQIKALS
>Mature_153_residues
MNNLSADSLKLDSQLCFKLYAASRAVIRAYKPMLDQLGLTYPQYLAMLVLWEWQQTAPEQPTVKALGERLALDSGTLTPL
LKRLEQLQLVQRQRSARDEREVHLSLTRQGQALREQVGPLKARLLCDSGVDLDRLNDLRSGLDHLLGQIKALS

Specific function: Organic peroxide sensor. Represses the expression of the peroxide-inducible gene ohrA by cooperative binding to two inverted repeat elements [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 17278; Mature: 17278

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS50995 HTH_MARR_2 ; PS00226 IF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNLSADSLKLDSQLCFKLYAASRAVIRAYKPMLDQLGLTYPQYLAMLVLWEWQQTAPEQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
PTVKALGERLALDSGTLTPLLKRLEQLQLVQRQRSARDEREVHLSLTRQGQALREQVGPL
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHCHH
KARLLCDSGVDLDRLNDLRSGLDHLLGQIKALS
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNNLSADSLKLDSQLCFKLYAASRAVIRAYKPMLDQLGLTYPQYLAMLVLWEWQQTAPEQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
PTVKALGERLALDSGTLTPLLKRLEQLQLVQRQRSARDEREVHLSLTRQGQALREQVGPL
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHCHH
KARLLCDSGVDLDRLNDLRSGLDHLLGQIKALS
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 11418552; 11983871 [H]