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The map label for this gene is yebR [H]

Identifier: 77460198

GI number: 77460198

Start: 4506223

End: 4506705

Strand: Reverse

Name: yebR [H]

Synonym: Pfl01_3977

Alternate gene names: 77460198

Gene position: 4506705-4506223 (Counterclockwise)

Preceding gene: 77460199

Following gene: 77460189

Centisome position: 70.0

GC content: 63.15

Gene sequence:

>483_bases
ATGATTGATTTGCAACAGAGCGGCCAGGGCCTCGAAGGCTATGGCATGTTGGCCGCACAACTGGAGTCGCTGCTGGCGGA
CGAGCGCGATTTCATCGCCAACGCCGCGCAGTTTTCGGCGTTTCTGTTCAACCAGCTCGATGATCTGAACTGGGCCGGTT
TCTACCTCAATCGCAACGAAGAGCTGGTGCTCGGTCCGTTCCAGGGCCAGATCGCCTGCGTGCGCATTCCGTTCGGACGC
GGTGTGTGCGGCGCGGCGGCTGCCAGCTTGCAAACGCAACGGGTTGAAGACGTTCACGCGTTCCCCGGCCATATCGCCTG
CGACAGCGCGTCGAACAGCGAGCTGGTCGTGCCGTTGGTCAAGGACGGTCGCCTGATCGGCGTGCTCGACCTCGACAGCC
CGAAGCTCGCGCGTTTCGGTGCCGACGATCAGGCCGGGATCGAGCAACTGGCGGCGATCTTCCTGCGCCTGACCGACTGC
TGA

Upstream 100 bases:

>100_bases
TCGCCGTGCGCTGGGCAACCGGCCGTGGCAACCGCAACGGACGTTGCGCTTACCAATTCGCCCGTTACTGGGTGGGACTG
AAATTGTTGGAGCACAAGGC

Downstream 100 bases:

>100_bases
TCACGCCGCCAGGCCCGCCTTGAGCAGCACGGCCGCCGGATCCACGGCATCGATCTGCCGTGGATCGAGAAACCGCGTGG
CGTACTGCAGATACACGCCA

Product: sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MIDLQQSGQGLEGYGMLAAQLESLLADERDFIANAAQFSAFLFNQLDDLNWAGFYLNRNEELVLGPFQGQIACVRIPFGR
GVCGAAAASLQTQRVEDVHAFPGHIACDSASNSELVVPLVKDGRLIGVLDLDSPKLARFGADDQAGIEQLAAIFLRLTDC

Sequences:

>Translated_160_residues
MIDLQQSGQGLEGYGMLAAQLESLLADERDFIANAAQFSAFLFNQLDDLNWAGFYLNRNEELVLGPFQGQIACVRIPFGR
GVCGAAAASLQTQRVEDVHAFPGHIACDSASNSELVVPLVKDGRLIGVLDLDSPKLARFGADDQAGIEQLAAIFLRLTDC
>Mature_160_residues
MIDLQQSGQGLEGYGMLAAQLESLLADERDFIANAAQFSAFLFNQLDDLNWAGFYLNRNEELVLGPFQGQIACVRIPFGR
GVCGAAAASLQTQRVEDVHAFPGHIACDSASNSELVVPLVKDGRLIGVLDLDSPKLARFGADDQAGIEQLAAIFLRLTDC

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=141, Percent_Identity=57.4468085106383, Blast_Score=170, Evalue=3e-44,
Organism=Saccharomyces cerevisiae, GI6322781, Length=148, Percent_Identity=39.8648648648649, Blast_Score=120, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 17229; Mature: 17229

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: PS01320 UPF0067

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDLQQSGQGLEGYGMLAAQLESLLADERDFIANAAQFSAFLFNQLDDLNWAGFYLNRNE
CCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC
ELVLGPFQGQIACVRIPFGRGVCGAAAASLQTQRVEDVHAFPGHIACDSASNSELVVPLV
EEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEE
KDGRLIGVLDLDSPKLARFGADDQAGIEQLAAIFLRLTDC
CCCCEEEEEECCCCCHHHCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIDLQQSGQGLEGYGMLAAQLESLLADERDFIANAAQFSAFLFNQLDDLNWAGFYLNRNE
CCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC
ELVLGPFQGQIACVRIPFGRGVCGAAAASLQTQRVEDVHAFPGHIACDSASNSELVVPLV
EEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEE
KDGRLIGVLDLDSPKLARFGADDQAGIEQLAAIFLRLTDC
CCCCEEEEEECCCCCHHHCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 10493123 [H]