| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460191
Identifier: 77460191
GI number: 77460191
Start: 4495197
End: 4495583
Strand: Direct
Name: 77460191
Synonym: Pfl01_3970
Alternate gene names: NA
Gene position: 4495197-4495583 (Clockwise)
Preceding gene: 77460190
Following gene: 77460192
Centisome position: 69.82
GC content: 61.76
Gene sequence:
>387_bases ATGTCGATCGGTGAATCCGGCCCGAACTCGGGCACCGCCTCCTCCACGCGTCGTCTGGGTGCTGCCGTTCTCGGCCTGCT GCACAGCCACGTCGAACTGTTCGGCATCGAACTGCAGGAACAGAAAGCACGCACCGTCAGCCTGTTGCTGTTCGCCGGCC TGGCGCTGGTGTTTGCGCTGCTGTTGCTGGTCGGCCTGTCGACCCTCGTACTGATCGTGTTCTGGGACACCTATCGCCTC GCCGCAATCATTGGTCTGTGCGTGTTTTACACCCTGGCGGCAATCTTTTGCGCGCTGCGTCTGAAGGCCGCAATCTTCGA TGAATCCTCGCCCTTCCACGGCACGCTGGAAGAACTGGCCAATGACCGGGAGCGCCTGCTGCCATGA
Upstream 100 bases:
>100_bases CCGCCACCGAGGAATATGTATCGGCCAACCCATGGCAATCGGTGGGCATCGCCGCCGGCGTCGGCTTTCTGATCGGCCTG CTGGCCACGCGGCGCTGATC
Downstream 100 bases:
>100_bases GCCTGCCTGAACTTCCGCACAACAGCTCACGCCGGGAAATGCGCAAGGCACTGATCCGTTTGCGCATGGAAATGCATCGT CAGGAAATCCGCCACGAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MSIGESGPNSGTASSTRRLGAAVLGLLHSHVELFGIELQEQKARTVSLLLFAGLALVFALLLLVGLSTLVLIVFWDTYRL AAIIGLCVFYTLAAIFCALRLKAAIFDESSPFHGTLEELANDRERLLP
Sequences:
>Translated_128_residues MSIGESGPNSGTASSTRRLGAAVLGLLHSHVELFGIELQEQKARTVSLLLFAGLALVFALLLLVGLSTLVLIVFWDTYRL AAIIGLCVFYTLAAIFCALRLKAAIFDESSPFHGTLEELANDRERLLP >Mature_127_residues SIGESGPNSGTASSTRRLGAAVLGLLHSHVELFGIELQEQKARTVSLLLFAGLALVFALLLLVGLSTLVLIVFWDTYRLA AIIGLCVFYTLAAIFCALRLKAAIFDESSPFHGTLEELANDRERLLP
Specific function: Unknown
COG id: COG5393
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13816; Mature: 13685
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIGESGPNSGTASSTRRLGAAVLGLLHSHVELFGIELQEQKARTVSLLLFAGLALVFAL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLVGLSTLVLIVFWDTYRLAAIIGLCVFYTLAAIFCALRLKAAIFDESSPFHGTLEELA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH NDRERLLP CHHHHCCC >Mature Secondary Structure SIGESGPNSGTASSTRRLGAAVLGLLHSHVELFGIELQEQKARTVSLLLFAGLALVFAL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLVGLSTLVLIVFWDTYRLAAIIGLCVFYTLAAIFCALRLKAAIFDESSPFHGTLEELA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH NDRERLLP CHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA