| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460142
Identifier: 77460142
GI number: 77460142
Start: 4437485
End: 4437943
Strand: Direct
Name: 77460142
Synonym: Pfl01_3921
Alternate gene names: NA
Gene position: 4437485-4437943 (Clockwise)
Preceding gene: 77460141
Following gene: 77460143
Centisome position: 68.92
GC content: 59.48
Gene sequence:
>459_bases ATGAGCGTCAAACCCATTCCCGAGGGGTATCACAGCACTACCCCGTACCTCGGCATTCACAAAGCTGCCGAAGCCATCGA CTTCTATAAAAAGGCGTTCGGTGCCACCGAAGTCATGCGCCTGAGCATGCCCGACGGCGGCATCGGCCACGCCGAACTGC GCATCGGCGACAGTGCGATCATGCTCGGCTCGCCATGCGATCAAGGGCCTTTGAGCAATCCGGACACAGCGGTGTCGGTC GGTTTGCATCTGTACGTGACCGATGTCGACAAATCCTTTCAGCGTGCGCTGGAGGCCGGCGCGACCTCGGTGTCCGAGGT CAAGGATCAGTTCTACGGCGACCGCAGCGGGACGTTGAAAGATCCGTACGGGCATCTGTGGTTCCTCGCCACGCGCAAGG AGGACCTGACCCAAGAGCAGATCGAGCAACGGGCAAAAGAGATGTTTCAGCAAGGTTAG
Upstream 100 bases:
>100_bases GCGGCGGCACAGATCTATAGTTGAGCGACCGGCAACCCCGGCGAAGGCACACCTTCAACCGCTAATAAAAACCAGGCAAC AAATAACAGGGAGTACCGCC
Downstream 100 bases:
>100_bases CCACGCCGAATATCCATTCCCGCGCAACGCGCGGGGATGGGCGAACACGATTCATGAACCGTCGAACCACGCTTCACGTC TTGTCATGAACGCCCGGCGA
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MSVKPIPEGYHSTTPYLGIHKAAEAIDFYKKAFGATEVMRLSMPDGGIGHAELRIGDSAIMLGSPCDQGPLSNPDTAVSV GLHLYVTDVDKSFQRALEAGATSVSEVKDQFYGDRSGTLKDPYGHLWFLATRKEDLTQEQIEQRAKEMFQQG
Sequences:
>Translated_152_residues MSVKPIPEGYHSTTPYLGIHKAAEAIDFYKKAFGATEVMRLSMPDGGIGHAELRIGDSAIMLGSPCDQGPLSNPDTAVSV GLHLYVTDVDKSFQRALEAGATSVSEVKDQFYGDRSGTLKDPYGHLWFLATRKEDLTQEQIEQRAKEMFQQG >Mature_151_residues SVKPIPEGYHSTTPYLGIHKAAEAIDFYKKAFGATEVMRLSMPDGGIGHAELRIGDSAIMLGSPCDQGPLSNPDTAVSVG LHLYVTDVDKSFQRALEAGATSVSEVKDQFYGDRSGTLKDPYGHLWFLATRKEDLTQEQIEQRAKEMFQQG
Specific function: Unknown
COG id: COG2764
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: NA
Molecular weight: Translated: 16666; Mature: 16535
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVKPIPEGYHSTTPYLGIHKAAEAIDFYKKAFGATEVMRLSMPDGGIGHAELRIGDSAI CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHEEEEECCCCCCCEEEEEECCCEE MLGSPCDQGPLSNPDTAVSVGLHLYVTDVDKSFQRALEAGATSVSEVKDQFYGDRSGTLK EECCCCCCCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCC DPYGHLWFLATRKEDLTQEQIEQRAKEMFQQG CCCCCEEEEEECCHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure SVKPIPEGYHSTTPYLGIHKAAEAIDFYKKAFGATEVMRLSMPDGGIGHAELRIGDSAI CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHEEEEECCCCCCCEEEEEECCCEE MLGSPCDQGPLSNPDTAVSVGLHLYVTDVDKSFQRALEAGATSVSEVKDQFYGDRSGTLK EECCCCCCCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCC DPYGHLWFLATRKEDLTQEQIEQRAKEMFQQG CCCCCEEEEEECCHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]