| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460126
Identifier: 77460126
GI number: 77460126
Start: 4423447
End: 4423728
Strand: Direct
Name: 77460126
Synonym: Pfl01_3905
Alternate gene names: NA
Gene position: 4423447-4423728 (Clockwise)
Preceding gene: 77460125
Following gene: 77460128
Centisome position: 68.7
GC content: 56.03
Gene sequence:
>282_bases ATGAAACGAATTTTGATTCTGATCGCCATACTGGCCGTTGCAGGCTGCGCGGCGACGTCGAAGACCCAGGTCAAGCATGG CAAGAAAGGGCTGCACATCAACTGTTCGGGGTTGTCCTCCTCTTGGGACAAGTGCTACACCAGCGCCGCGAACTCTTGCG CGCCGAAGGGCTACAAGGTCATCGCAAAATCAGGTGATGCCGTGGAAGAACCGGGTGATTACCCCTTCGGTCTCAACCCC GCCGGTTACACCAGCCGCAGCATGATCGTCATCTGCAAATAA
Upstream 100 bases:
>100_bases CAGACATGGATTTTTTCGGACAGGGACATCGGAACGCTTCAAGCGAGAGCGAATACAGGCAGACCCGAGCGCCAGACTCG AGGCCGCCATAAGGACGGTA
Downstream 100 bases:
>100_bases ACCATCGCCGCTACTGCACTCGCGAAGCGGCGAGCTGGTTCCCGATCTCTTCATGACAGGACTTCAGCACACGCTGCTGA ATCTTGGGCGACGCCAACAT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MKRILILIAILAVAGCAATSKTQVKHGKKGLHINCSGLSSSWDKCYTSAANSCAPKGYKVIAKSGDAVEEPGDYPFGLNP AGYTSRSMIVICK
Sequences:
>Translated_93_residues MKRILILIAILAVAGCAATSKTQVKHGKKGLHINCSGLSSSWDKCYTSAANSCAPKGYKVIAKSGDAVEEPGDYPFGLNP AGYTSRSMIVICK >Mature_93_residues MKRILILIAILAVAGCAATSKTQVKHGKKGLHINCSGLSSSWDKCYTSAANSCAPKGYKVIAKSGDAVEEPGDYPFGLNP AGYTSRSMIVICK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9763; Mature: 9763
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRILILIAILAVAGCAATSKTQVKHGKKGLHINCSGLSSSWDKCYTSAANSCAPKGYKV CCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCEEE IAKSGDAVEEPGDYPFGLNPAGYTSRSMIVICK EECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC >Mature Secondary Structure MKRILILIAILAVAGCAATSKTQVKHGKKGLHINCSGLSSSWDKCYTSAANSCAPKGYKV CCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCEEE IAKSGDAVEEPGDYPFGLNPAGYTSRSMIVICK EECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA