Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77460115

Identifier: 77460115

GI number: 77460115

Start: 4405076

End: 4405480

Strand: Direct

Name: 77460115

Synonym: Pfl01_3894

Alternate gene names: NA

Gene position: 4405076-4405480 (Clockwise)

Preceding gene: 77460114

Following gene: 77460119

Centisome position: 68.42

GC content: 57.04

Gene sequence:

>405_bases
ATGTCCCCACGCCTGCTTCTGGCCCTGACGCCTTTTCTTTTCACTTCCGTTGCTCACGCTGCCGTGGACTGCGCTAATGC
CAGCGATCAGGCCACCATGAACCAGTGCGCCGCGCAGGAAAACAAGGCGGCGGACAAGGAGTTGAATACGGTTTATCAGC
AGATTACCGCTCGGTTGAAGGACAACCCTGATGGCAAGAAACTGCTGGTGAGCGCGCAACGGGCGTGGATCGGCTTTCGC
GATACCGAGTGCAAGTTTTCGGCATCCGGGGTGGCAGGCGGGAGTGTTTATCCGTTGATCTACAACAATTGCATCACCTC
AGTGACAAAGACGCGAACCGAGGCGCTCAAGCAGTATTTGAAGTGTGAGGAAGGTGACATGAGCTGCCCGGTGCCCGGAG
CCTGA

Upstream 100 bases:

>100_bases
GCCGAACGGTTGCTCAACGCATCCAGACATCGCACACCTTCTTAGCGCCATGAAGTCGCTAAACTGCCCGGCACGTTCAT
TCATCAAAGCGAGATGACTC

Downstream 100 bases:

>100_bases
TCTTCCAGAGTTATTGAAGGCCTCATCGCTGGCAAGCCAGCTCCCACAGTTTTTGTGTCGATCACAAAAAACTGCAACTG
CACAAACCCCTGTGGGAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MSPRLLLALTPFLFTSVAHAAVDCANASDQATMNQCAAQENKAADKELNTVYQQITARLKDNPDGKKLLVSAQRAWIGFR
DTECKFSASGVAGGSVYPLIYNNCITSVTKTRTEALKQYLKCEEGDMSCPVPGA

Sequences:

>Translated_134_residues
MSPRLLLALTPFLFTSVAHAAVDCANASDQATMNQCAAQENKAADKELNTVYQQITARLKDNPDGKKLLVSAQRAWIGFR
DTECKFSASGVAGGSVYPLIYNNCITSVTKTRTEALKQYLKCEEGDMSCPVPGA
>Mature_133_residues
SPRLLLALTPFLFTSVAHAAVDCANASDQATMNQCAAQENKAADKELNTVYQQITARLKDNPDGKKLLVSAQRAWIGFRD
TECKFSASGVAGGSVYPLIYNNCITSVTKTRTEALKQYLKCEEGDMSCPVPGA

Specific function: Unknown

COG id: COG3755

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To E.coli yecT [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009739 [H]

Pfam domain/function: PF07007 DUF1311 [H]

EC number: NA

Molecular weight: Translated: 14466; Mature: 14334

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPRLLLALTPFLFTSVAHAAVDCANASDQATMNQCAAQENKAADKELNTVYQQITARLK
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DNPDGKKLLVSAQRAWIGFRDTECKFSASGVAGGSVYPLIYNNCITSVTKTRTEALKQYL
CCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KCEEGDMSCPVPGA
CCCCCCCCCCCCCC
>Mature Secondary Structure 
SPRLLLALTPFLFTSVAHAAVDCANASDQATMNQCAAQENKAADKELNTVYQQITARLK
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DNPDGKKLLVSAQRAWIGFRDTECKFSASGVAGGSVYPLIYNNCITSVTKTRTEALKQYL
CCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KCEEGDMSCPVPGA
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8121412; 11481430 [H]